RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 CTSSP25774 331 aa10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 CD38P28907 300 aa10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 SULT1A1P50225 295 aa10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 SLC35A1P78382 337 aa10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 UBE2V2Q15819 145 aa10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 CLEC9AQ6UXN8 241 aa10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 RLN3Q8WXF3 142 aa10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 HAS2Q92819 552 aa10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 MRPL38Q96DV4 380 aaKnown RBP10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 LYZL4Q96KX0 146 aa10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 ZNF160Q9HCG1 818 aa10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 ANXA10Q9UJ72 324 aa10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 A0A1W2PNR3 127 aa10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 E9PLN8 166 aa10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 AP4M1O00189 453 aa10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 DHRS3O75911 302 aa10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 IGLV3-1P01715 115 aa10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 TMEM225BP0DP42 221 aa10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 NQO2P16083 231 aa10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 EIF2S3P41091 472 aaKnown RBP10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 PIGPP57054 158 aa10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 FOXL2P58012 376 aa10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 RAB1AP62820 205 aa10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 HIST3H3Q16695 136 aa10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 ADAM5Q6NVV9 412 aa10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 OGFOD3Q6PK18 319 aa10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 PLXDC1Q8IUK5 500 aa10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 FAM24BQ8N5W8 94 aa10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 LINC00469Q8N7U9 141 aa10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 CD300LFQ8TDQ1 290 aa10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 BSCL2Q96G97 398 aaPredicted RBP10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 CHST5Q9GZS9 411 aa10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 SLC35B3Q9H1N7 401 aa10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 NAA60Q9H7X0 242 aa10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 WFDC1Q9HC57 220 aa10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 MIOXQ9UGB7 285 aa10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 V9GYS6 101 aa10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 UNC13CQ8NB66 2214 aa10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 NCOA6Q14686 2063 aaPredicted RBP10.35□□□□□ -0.75
VIPAS39-211ENST00000557658 A0A0U1RQV5 110 aa10.34□□□□□ -0.75
VIPAS39-211ENST00000557658 C5orf63A6NC05 138 aa10.34□□□□□ -0.75
VIPAS39-211ENST00000557658 LMO7DNF2Z398 122 aa10.34□□□□□ -0.75
VIPAS39-211ENST00000557658 TXNL1O43396 289 aa10.34□□□□□ -0.75
VIPAS39-211ENST00000557658 TLX3O43711 291 aaPredicted RBP10.34□□□□□ -0.75
VIPAS39-211ENST00000557658 OR8U8P0C7N1 319 aa10.34□□□□□ -0.75
VIPAS39-211ENST00000557658 FAHP16930 419 aa10.34□□□□□ -0.75
VIPAS39-211ENST00000557658 GUCA1AP43080 201 aaPredicted RBP10.34□□□□□ -0.75
VIPAS39-211ENST00000557658 DLX2Q07687 328 aaPredicted RBP10.34□□□□□ -0.75
VIPAS39-211ENST00000557658 ABCA11PQ4W5N1 156 aa10.34□□□□□ -0.75
VIPAS39-211ENST00000557658 HIST2H3AQ71DI3 136 aa10.34□□□□□ -0.75
VIPAS39-211ENST00000557658 DEFB119Q8N690 84 aa10.34□□□□□ -0.75
VIPAS39-211ENST00000557658 STT3BQ8TCJ2 826 aa10.34□□□□□ -0.75
VIPAS39-211ENST00000557658 PIGTQ969N2 578 aa10.34□□□□□ -0.75
VIPAS39-211ENST00000557658 HDHD3Q9BSH5 251 aaPredicted RBP10.34□□□□□ -0.75
VIPAS39-211ENST00000557658 RSRP1Q9BUV0 290 aa10.34□□□□□ -0.75
VIPAS39-211ENST00000557658 IGHV1OR21-1A0A087WYE8 117 aa10.34□□□□□ -0.75
VIPAS39-211ENST00000557658 MASP2O00187 686 aa10.34□□□□□ -0.75
VIPAS39-211ENST00000557658 IFNA17P01571 189 aa10.34□□□□□ -0.75
VIPAS39-211ENST00000557658 ZNF728P0DKX0 622 aa10.34□□□□□ -0.75
VIPAS39-211ENST00000557658 STARD6P59095 220 aa10.34□□□□□ -0.75
VIPAS39-211ENST00000557658 LSM6P62312 80 aaKnown RBP10.34□□□□□ -0.75
VIPAS39-211ENST00000557658 TMEM187Q14656 261 aa10.34□□□□□ -0.75
VIPAS39-211ENST00000557658 Q6ZS52 159 aa10.34□□□□□ -0.75
VIPAS39-211ENST00000557658 TMEM156Q8N614 296 aa10.34□□□□□ -0.75
VIPAS39-211ENST00000557658 ZNF565Q8N9K5 539 aa10.34□□□□□ -0.75
VIPAS39-211ENST00000557658 LFNGQ8NES3 379 aa10.34□□□□□ -0.75
VIPAS39-211ENST00000557658 NFAM1Q8NET5 270 aaPredicted RBP10.34□□□□□ -0.75
VIPAS39-211ENST00000557658 SNIP1Q8TAD8 396 aaKnown RBP10.34□□□□□ -0.75
VIPAS39-211ENST00000557658 RNF138Q8WVD3 245 aa10.34□□□□□ -0.75
VIPAS39-211ENST00000557658 TOMM40LQ969M1 308 aa10.34□□□□□ -0.75
VIPAS39-211ENST00000557658 NECAP2Q9NVZ3 263 aa10.34□□□□□ -0.75
VIPAS39-211ENST00000557658 PIGLQ9Y2B2 252 aa10.34□□□□□ -0.75
VIPAS39-211ENST00000557658 TRBV11-1A0A0K0K1C0 115 aa10.33□□□□□ -0.76
VIPAS39-211ENST00000557658 A0A1W2PR77 199 aa10.33□□□□□ -0.76
VIPAS39-211ENST00000557658 ZNF850A8MQ14 1090 aa10.33□□□□□ -0.76
VIPAS39-211ENST00000557658 ZNF814B7Z6K7 855 aa10.33□□□□□ -0.76
VIPAS39-211ENST00000557658 F5H5K5 113 aa10.33□□□□□ -0.76
VIPAS39-211ENST00000557658 DUX1O43812 170 aa10.33□□□□□ -0.76
VIPAS39-211ENST00000557658 CLN5O75503 358 aa10.33□□□□□ -0.76
VIPAS39-211ENST00000557658 DIRAS3O95661 229 aa10.33□□□□□ -0.76
VIPAS39-211ENST00000557658 ARG1P05089 322 aa10.33□□□□□ -0.76
VIPAS39-211ENST00000557658 NR2C1P13056 603 aa10.33□□□□□ -0.76
VIPAS39-211ENST00000557658 FHITP49789 147 aa10.33□□□□□ -0.76
VIPAS39-211ENST00000557658 OR2B8PP59922 312 aa10.33□□□□□ -0.76
VIPAS39-211ENST00000557658 IL13RA2Q14627 380 aa10.33□□□□□ -0.76
VIPAS39-211ENST00000557658 SP6Q3SY56 376 aa10.33□□□□□ -0.76
VIPAS39-211ENST00000557658 IGSF11Q5DX21 431 aa10.33□□□□□ -0.76
VIPAS39-211ENST00000557658 ANKRD37Q7Z713 158 aa10.33□□□□□ -0.76
VIPAS39-211ENST00000557658 GJC3Q8NFK1 279 aa10.33□□□□□ -0.76
VIPAS39-211ENST00000557658 RTN4IP1Q8WWV3 396 aaPredicted RBP10.33□□□□□ -0.76
VIPAS39-211ENST00000557658 GALNT14Q96FL9 552 aa10.33□□□□□ -0.76
VIPAS39-211ENST00000557658 Q96M66 194 aa10.33□□□□□ -0.76
VIPAS39-211ENST00000557658 GNRHR2Q96P88 292 aa10.33□□□□□ -0.76
VIPAS39-211ENST00000557658 SUCNR1Q9BXA5 334 aa10.33□□□□□ -0.76
VIPAS39-211ENST00000557658 NKX2-4Q9H2Z4 354 aa10.33□□□□□ -0.76
VIPAS39-211ENST00000557658 TMPRSS5Q9H3S3 457 aa10.33□□□□□ -0.76
VIPAS39-211ENST00000557658 METTL7AQ9H8H3 244 aa10.33□□□□□ -0.76
VIPAS39-211ENST00000557658 FBXO7Q9Y3I1 522 aa10.33□□□□□ -0.76
VIPAS39-211ENST00000557658 A0A1W2PPE2 198 aa10.33□□□□□ -0.76
VIPAS39-211ENST00000557658 H7C1Q1 480 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms