RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 C10orf35Q96D05 121 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 CMTM5Q96DZ9 223 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 SH3YL1Q96HL8 342 aaPredicted RBP2.49□□□□□ -2.01
SRP54-209ENST00000555746 RNF170Q96K19 258 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 FAM210BQ96KR6 192 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 VSTM2LQ96N03 204 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 PRAP1Q96NZ9 151 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 SERPINB12Q96P63 405 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 SIGLEC12Q96PQ1 595 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 PPP1R2P1Q96PQ5 205 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 SLC38A2Q96QD8 506 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 PFDN5Q99471 154 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 RBBP8Q99708 897 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 SLC35A5Q9BS91 424 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 FEM1AQ9BSK4 669 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 PAXXQ9BUH6 204 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 TMED9Q9BVK6 235 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 YTHDF1Q9BYJ9 559 aaKnown RBP2.49□□□□□ -2.01
SRP54-209ENST00000555746 MRPS26Q9BYN8 205 aaKnown RBP2.49□□□□□ -2.01
SRP54-209ENST00000555746 SLC19A3Q9BZV2 496 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 UCK2Q9BZX2 261 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 ZNF430Q9H8G1 570 aaPredicted RBP2.49□□□□□ -2.01
SRP54-209ENST00000555746 RHOFQ9HBH0 211 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 EML4Q9HC35 981 aaKnown RBP2.49□□□□□ -2.01
SRP54-209ENST00000555746 MEPEQ9NQ76 525 aaPredicted RBP2.49□□□□□ -2.01
SRP54-209ENST00000555746 POLE4Q9NR33 117 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 SLC2A9Q9NRM0 540 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 PLEKHJ1Q9NW61 149 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 C1orf109Q9NX04 203 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 BABAM2Q9NXR7 383 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 VNN3Q9NY84 501 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 EHFQ9NZC4 300 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 GALPQ9UBC7 116 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 CLN8Q9UBY8 286 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 SMPXQ9UHP9 88 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 NXT1Q9UKK6 140 aaKnown RBP2.49□□□□□ -2.01
SRP54-209ENST00000555746 GUCA1BQ9UMX6 200 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 PDE10AQ9Y233 779 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 NDUFAF1Q9Y375 327 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 NUBP2Q9Y5Y2 271 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 ALG6Q9Y672 507 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 ARL5AQ9Y689 179 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 USH1CQ9Y6N9 552 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 MEGF8Q7Z7M0 2845 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 KCNE1BA0A087WTH5 132 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 PQLC2LA1A4F0 135 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 FAM168BA1KXE4 195 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 EFCAB7A8K855 629 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 CENPXA8MT69 81 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 H0Y980 276 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 CLDN34H7C241 214 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 M0R3G1 203 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 MAGEB4O15481 346 aaPredicted RBP2.48□□□□□ -2.01
SRP54-209ENST00000555746 ARPC5O15511 151 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 AIREO43918 545 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 MGRN1O60291 552 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 HSBP1O75506 76 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 SC5DO75845 299 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 AQP8O94778 261 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 TNFAIP8O95379 198 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 UTS2O95399 124 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 SLC2A10O95528 541 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 AP2A1O95782 977 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 ACTL6AO96019 429 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 TCRBP04435 133 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 RBP1P09455 135 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 NBEAP1P0C6P0 100 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 FAM228BP0C875 321 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 SMIM6P0DI80 62 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 MYL2P10916 166 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 SCGB1A1P11684 91 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 ANXA3P12429 323 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 RNH1P13489 461 aaKnown RBP2.48□□□□□ -2.01
SRP54-209ENST00000555746 ATP1B2P14415 290 aaPredicted RBP2.48□□□□□ -2.01
SRP54-209ENST00000555746 SDC1P18827 310 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 KLK2P20151 261 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 ADORA1P30542 326 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 CALCRP30988 508 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 CD52P31358 61 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 TALDO1P37837 337 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 COILP38432 576 aaPredicted RBP2.48□□□□□ -2.01
SRP54-209ENST00000555746 XCR1P46094 333 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 YAP1P46937 504 aaKnown RBP2.48□□□□□ -2.01
SRP54-209ENST00000555746 HCAR3P49019 387 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 ACOT2P49753 483 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 MEOX2P50222 304 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 IDH3GP51553 393 aaPredicted RBP2.48□□□□□ -2.01
SRP54-209ENST00000555746 SLC25A1P53007 311 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 FGF8P55075 233 aaPredicted RBP2.48□□□□□ -2.01
SRP54-209ENST00000555746 OR4D2P58180 307 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 UBE2KP61086 200 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 ELF3P78545 371 aaPredicted RBP2.48□□□□□ -2.01
SRP54-209ENST00000555746 CXCL6P80162 114 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 RPL19P84098 196 aaKnown RBP2.48□□□□□ -2.01
SRP54-209ENST00000555746 DEFA6Q01524 100 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 SRSF6Q13247 344 aaKnown RBP2.48□□□□□ -2.01
SRP54-209ENST00000555746 KRR1Q13601 381 aaKnown RBP2.48□□□□□ -2.01
SRP54-209ENST00000555746 EXOSC2Q13868 293 aaKnown RBP2.48□□□□□ -2.01
SRP54-209ENST00000555746 TFDP1Q14186 410 aa2.48□□□□□ -2.01
SRP54-209ENST00000555746 ZBTB6Q15916 424 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms