RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 RNASE12Q5GAN4 147 aaKnown RBP8.47□□□□□ -1.05
PSEN1-213ENST00000555386 C1QTNF12Q5T7M4 302 aa8.47□□□□□ -1.05
PSEN1-213ENST00000555386 TMEM244Q5VVB8 128 aa8.47□□□□□ -1.05
PSEN1-213ENST00000555386 SLC7A5P1Q8MH63 180 aa8.47□□□□□ -1.05
PSEN1-213ENST00000555386 MUC15Q8N387 334 aa8.47□□□□□ -1.05
PSEN1-213ENST00000555386 OR51A4Q8NGJ6 313 aa8.47□□□□□ -1.05
PSEN1-213ENST00000555386 OR10AC1Q8NH08 325 aa8.47□□□□□ -1.05
PSEN1-213ENST00000555386 GIMAP1Q8WWP7 306 aa8.47□□□□□ -1.05
PSEN1-213ENST00000555386 PHF21AQ96BD5 680 aa8.47□□□□□ -1.05
PSEN1-213ENST00000555386 POM121L2Q96KW2 1035 aa8.47□□□□□ -1.05
PSEN1-213ENST00000555386 DHRS9Q9BPW9 319 aa8.47□□□□□ -1.05
PSEN1-213ENST00000555386 SYT3Q9BQG1 590 aa8.47□□□□□ -1.05
PSEN1-213ENST00000555386 C1orf198Q9H425 327 aa8.47□□□□□ -1.05
PSEN1-213ENST00000555386 PLSCR3Q9NRY6 295 aa8.47□□□□□ -1.05
PSEN1-213ENST00000555386 EIF3KQ9UBQ5 218 aaKnown RBP8.47□□□□□ -1.05
PSEN1-213ENST00000555386 DUSP13Q9UII6 198 aa8.47□□□□□ -1.05
PSEN1-213ENST00000555386 HHLA2Q9UM44 414 aa8.47□□□□□ -1.05
PSEN1-213ENST00000555386 NPTNQ9Y639 398 aa8.47□□□□□ -1.05
PSEN1-213ENST00000555386 GGT3PA6NGU5 568 aa8.46□□□□□ -1.05
PSEN1-213ENST00000555386 H7C417 338 aa8.46□□□□□ -1.05
PSEN1-213ENST00000555386 SULT1C2O00338 296 aa8.46□□□□□ -1.05
PSEN1-213ENST00000555386 FABP7O15540 132 aa8.46□□□□□ -1.05
PSEN1-213ENST00000555386 SYNGR3O43761 229 aa8.46□□□□□ -1.05
PSEN1-213ENST00000555386 ZNF780AO75290 641 aaPredicted RBP8.46□□□□□ -1.05
PSEN1-213ENST00000555386 RBBP9O75884 186 aa8.46□□□□□ -1.05
PSEN1-213ENST00000555386 PNPP00491 289 aa8.46□□□□□ -1.05
PSEN1-213ENST00000555386 NGFP01138 241 aa8.46□□□□□ -1.05
PSEN1-213ENST00000555386 IL5P05113 134 aa8.46□□□□□ -1.05
PSEN1-213ENST00000555386 UBCP0CG48 685 aaKnown RBP8.46□□□□□ -1.05
PSEN1-213ENST00000555386 APOBEC3AP31941 199 aaPredicted RBP8.46□□□□□ -1.05
PSEN1-213ENST00000555386 CDKN1AP38936 164 aa8.46□□□□□ -1.05
PSEN1-213ENST00000555386 WNT5AP41221 380 aa8.46□□□□□ -1.05
PSEN1-213ENST00000555386 SLC6A9P48067 706 aa8.46□□□□□ -1.05
PSEN1-213ENST00000555386 PRKXP51817 358 aa8.46□□□□□ -1.05
PSEN1-213ENST00000555386 UCP2P55851 309 aa8.46□□□□□ -1.05
PSEN1-213ENST00000555386 Q5BKY6 102 aa8.46□□□□□ -1.05
PSEN1-213ENST00000555386 C20orf204Q6ZNR8 217 aa8.46□□□□□ -1.05
PSEN1-213ENST00000555386 RFPL4BQ6ZWI9 263 aa8.46□□□□□ -1.05
PSEN1-213ENST00000555386 RHOUQ7L0Q8 258 aa8.46□□□□□ -1.05
PSEN1-213ENST00000555386 LRP11Q86VZ4 500 aa8.46□□□□□ -1.05
PSEN1-213ENST00000555386 ZNF101Q8IZC7 436 aa8.46□□□□□ -1.05
PSEN1-213ENST00000555386 ZNF611Q8N823 705 aa8.46□□□□□ -1.05
PSEN1-213ENST00000555386 NKAIN3Q8N8D7 197 aa8.46□□□□□ -1.05
PSEN1-213ENST00000555386 OR11H7Q8NGC8 314 aa8.46□□□□□ -1.05
PSEN1-213ENST00000555386 OR6M1Q8NGM8 313 aa8.46□□□□□ -1.05
PSEN1-213ENST00000555386 OR1J1Q8NGS3 322 aa8.46□□□□□ -1.05
PSEN1-213ENST00000555386 ST7LQ8TDW4 575 aa8.46□□□□□ -1.05
PSEN1-213ENST00000555386 TMEM171Q8WVE6 324 aa8.46□□□□□ -1.05
PSEN1-213ENST00000555386 RNF133Q8WVZ7 376 aa8.46□□□□□ -1.05
PSEN1-213ENST00000555386 PTX4Q96A99 478 aa8.46□□□□□ -1.05
PSEN1-213ENST00000555386 FAM3DQ96BQ1 224 aa8.46□□□□□ -1.05
PSEN1-213ENST00000555386 FOXRED1Q96CU9 486 aaPredicted RBP8.46□□□□□ -1.05
PSEN1-213ENST00000555386 SLAMF6Q96DU3 332 aa8.46□□□□□ -1.05
PSEN1-213ENST00000555386 MTFP1Q9UDX5 166 aa8.46□□□□□ -1.05
PSEN1-213ENST00000555386 SCP2D1Q9UJQ7 156 aa8.46□□□□□ -1.05
PSEN1-213ENST00000555386 OR6C6A6NF89 314 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 SNRPGP15A8MWD9 76 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 GMDSO60547 372 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 NDUFB6O95139 128 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 SLC2A1P11166 492 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 SERPINF1P36955 418 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 RAD52P43351 418 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 POU3F4P49335 361 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 MFGE8Q08431 387 aaPredicted RBP8.45□□□□□ -1.06
PSEN1-213ENST00000555386 ADIPOQQ15848 244 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 MSMPQ1L6U9 139 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 LAMTOR1Q6IAA8 161 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 RGS7BPQ6MZT1 257 aaPredicted RBP8.45□□□□□ -1.06
PSEN1-213ENST00000555386 NAA40Q86UY6 237 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 SERPINA12Q8IW75 414 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 C9orf62Q8N4C0 152 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 SPICQ8N5J4 248 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 DNAAF1Q8NEP3 725 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 OR51D1Q8NGF3 324 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 OR10S1Q8NGN2 331 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 PERPQ96FX8 193 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 POFUT1Q9H488 388 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 SCPEP1Q9HB40 452 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 GPN1Q9HCN4 374 aaPredicted RBP8.45□□□□□ -1.06
PSEN1-213ENST00000555386 G6PC2Q9NQR9 355 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 KLK11Q9UBX7 282 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 ZNF107Q9UII5 783 aaPredicted RBP8.45□□□□□ -1.06
PSEN1-213ENST00000555386 ZNF222Q9UK12 451 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 OR52A1Q9UKL2 312 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 EDARQ9UNE0 448 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 SLC22A13Q9Y226 551 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 CHD3Q12873 2000 aaKnown RBP8.45□□□□□ -1.06
PSEN1-213ENST00000555386 LOC390937A0A1W2PQ73 354 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 VSTM5A8MXK1 200 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 SSNA1O43805 119 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 SMPD2O60906 423 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 LCATP04180 440 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 H2BFMP0C1H6 154 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 HTR2CP28335 458 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 HSD11B1P28845 292 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 ACTBP60709 375 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 PPP1CBP62140 327 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 ACTG1P63261 375 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 HIST1H3AP68431 136 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 NKX6-1P78426 367 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms