RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 KAAG1Q9UBP8 84 aa10.07□□□□□ -0.8
SRP54-206ENST00000555317 CTSZQ9UBR2 303 aa10.07□□□□□ -0.8
SRP54-206ENST00000555317 DIMT1Q9UNQ2 313 aaKnown RBP10.07□□□□□ -0.8
SRP54-206ENST00000555317 CAB39Q9Y376 341 aaPredicted RBP10.07□□□□□ -0.8
SRP54-206ENST00000555317 CUBNO60494 3623 aa10.07□□□□□ -0.8
SRP54-206ENST00000555317 KIR2DS1A0A191URI9 304 aa10.06□□□□□ -0.8
SRP54-206ENST00000555317 OR4C45A6NMZ5 311 aa10.06□□□□□ -0.8
SRP54-206ENST00000555317 OR2AT4A6NND4 320 aa10.06□□□□□ -0.8
SRP54-206ENST00000555317 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.06□□□□□ -0.8
SRP54-206ENST00000555317 PLATP00750 562 aa10.06□□□□□ -0.8
SRP54-206ENST00000555317 AVPP01185 164 aa10.06□□□□□ -0.8
SRP54-206ENST00000555317 LIPFP07098 398 aa10.06□□□□□ -0.8
SRP54-206ENST00000555317 LIMS3P0CW19 117 aa10.06□□□□□ -0.8
SRP54-206ENST00000555317 LIMS4P0CW20 117 aa10.06□□□□□ -0.8
SRP54-206ENST00000555317 FPR2P25090 351 aa10.06□□□□□ -0.8
SRP54-206ENST00000555317 TGM4P49221 684 aa10.06□□□□□ -0.8
SRP54-206ENST00000555317 ETV1P50549 477 aa10.06□□□□□ -0.8
SRP54-206ENST00000555317 CAPZA1P52907 286 aa10.06□□□□□ -0.8
SRP54-206ENST00000555317 ATP1B3P54709 279 aa10.06□□□□□ -0.8
SRP54-206ENST00000555317 AQP4P55087 323 aa10.06□□□□□ -0.8
SRP54-206ENST00000555317 ST3GAL4Q11206 333 aa10.06□□□□□ -0.8
SRP54-206ENST00000555317 C11orf91Q3C1V1 193 aa10.06□□□□□ -0.8
SRP54-206ENST00000555317 CCDC58Q4VC31 144 aa10.06□□□□□ -0.8
SRP54-206ENST00000555317 METTL11BQ5VVY1 283 aa10.06□□□□□ -0.8
SRP54-206ENST00000555317 STUMQ69YW2 141 aa10.06□□□□□ -0.8
SRP54-206ENST00000555317 RPL22L1Q6P5R6 122 aaKnown RBP10.06□□□□□ -0.8
SRP54-206ENST00000555317 ZNF841Q6ZN19 808 aa10.06□□□□□ -0.8
SRP54-206ENST00000555317 STX19Q8N4C7 294 aa10.06□□□□□ -0.8
SRP54-206ENST00000555317 FAM216BQ8N7L0 139 aa10.06□□□□□ -0.8
SRP54-206ENST00000555317 POC1AQ8NBT0 407 aa10.06□□□□□ -0.8
SRP54-206ENST00000555317 TFAP2CQ92754 450 aa10.06□□□□□ -0.8
SRP54-206ENST00000555317 SEH1LQ96EE3 360 aa10.06□□□□□ -0.8
SRP54-206ENST00000555317 PKIBQ9C010 78 aa10.06□□□□□ -0.8
SRP54-206ENST00000555317 RASSF4Q9H2L5 321 aa10.06□□□□□ -0.8
SRP54-206ENST00000555317 SMURF1Q9HCE7 757 aa10.06□□□□□ -0.8
SRP54-206ENST00000555317 CNOT2Q9NZN8 540 aaKnown RBP10.06□□□□□ -0.8
SRP54-206ENST00000555317 OPN4Q9UHM6 478 aa10.06□□□□□ -0.8
SRP54-206ENST00000555317 DHDHQ9UQ10 334 aa10.06□□□□□ -0.8
SRP54-206ENST00000555317 STAB1Q9NY15 2570 aa10.05□□□□□ -0.8
SRP54-206ENST00000555317 RNF212BA8MTL3 300 aa10.05□□□□□ -0.8
SRP54-206ENST00000555317 C22orf46C9J442 243 aa10.05□□□□□ -0.8
SRP54-206ENST00000555317 H0YJX3 145 aa10.05□□□□□ -0.8
SRP54-206ENST00000555317 SLC1A7O00341 560 aa10.05□□□□□ -0.8
SRP54-206ENST00000555317 TNFRSF13BO14836 293 aaPredicted RBP10.05□□□□□ -0.8
SRP54-206ENST00000555317 MYL12BO14950 172 aa10.05□□□□□ -0.8
SRP54-206ENST00000555317 GPR37O15354 613 aa10.05□□□□□ -0.8
SRP54-206ENST00000555317 SYNGR1O43759 233 aa10.05□□□□□ -0.8
SRP54-206ENST00000555317 ZFPL1O95159 310 aa10.05□□□□□ -0.8
SRP54-206ENST00000555317 PGA5P0DJD9 388 aa10.05□□□□□ -0.8
SRP54-206ENST00000555317 PPIAL4GP0DN37 164 aa10.05□□□□□ -0.8
SRP54-206ENST00000555317 PIPP12273 146 aaPredicted RBP10.05□□□□□ -0.8
SRP54-206ENST00000555317 NDUFB7P17568 137 aa10.05□□□□□ -0.8
SRP54-206ENST00000555317 HSPA13P48723 471 aa10.05□□□□□ -0.8
SRP54-206ENST00000555317 RBP2P50120 134 aa10.05□□□□□ -0.8
SRP54-206ENST00000555317 MTCP1P56278 107 aa10.05□□□□□ -0.8
SRP54-206ENST00000555317 PAX8Q06710 450 aa10.05□□□□□ -0.8
SRP54-206ENST00000555317 IL24Q13007 206 aa10.05□□□□□ -0.8
SRP54-206ENST00000555317 UBE2V2Q15819 145 aa10.05□□□□□ -0.8
SRP54-206ENST00000555317 FIP1L1Q6UN15 594 aaKnown RBP10.05□□□□□ -0.8
SRP54-206ENST00000555317 RBMS3Q6XE24 437 aaKnown RBP10.05□□□□□ -0.8
SRP54-206ENST00000555317 ACP7Q6ZNF0 438 aa10.05□□□□□ -0.8
SRP54-206ENST00000555317 C1orf229Q6ZS94 237 aaPredicted RBP10.05□□□□□ -0.8
SRP54-206ENST00000555317 LHFPL2Q6ZUX7 228 aa10.05□□□□□ -0.8
SRP54-206ENST00000555317 AHSA2Q719I0 299 aa10.05□□□□□ -0.8
SRP54-206ENST00000555317 UTS2BQ765I0 119 aa10.05□□□□□ -0.8
SRP54-206ENST00000555317 BTN2A1Q7KYR7 527 aa10.05□□□□□ -0.8
SRP54-206ENST00000555317 ANGPTL5Q86XS5 388 aa10.05□□□□□ -0.8
SRP54-206ENST00000555317 CMTM4Q8IZR5 234 aa10.05□□□□□ -0.8
SRP54-206ENST00000555317 DNAAF1Q8NEP3 725 aa10.05□□□□□ -0.8
SRP54-206ENST00000555317 TMEM185AQ8NFB2 350 aa10.05□□□□□ -0.8
SRP54-206ENST00000555317 BPIFB6Q8NFQ5 453 aa10.05□□□□□ -0.8
SRP54-206ENST00000555317 TMEM158Q8WZ71 300 aa10.05□□□□□ -0.8
SRP54-206ENST00000555317 H1FXQ92522 213 aaKnown RBP10.05□□□□□ -0.8
SRP54-206ENST00000555317 RNF166Q96A37 237 aaPredicted RBP10.05□□□□□ -0.8
SRP54-206ENST00000555317 SPSB1Q96BD6 273 aa10.05□□□□□ -0.8
SRP54-206ENST00000555317 ADAT3Q96EY9 351 aaPredicted RBP10.05□□□□□ -0.8
SRP54-206ENST00000555317 PDCD1LG2Q9BQ51 273 aa10.05□□□□□ -0.8
SRP54-206ENST00000555317 SUCNR1Q9BXA5 334 aa10.05□□□□□ -0.8
SRP54-206ENST00000555317 SLC25A10Q9UBX3 287 aaPredicted RBP10.05□□□□□ -0.8
SRP54-206ENST00000555317 NUP50Q9UKX7 468 aa10.05□□□□□ -0.8
SRP54-206ENST00000555317 FBN1P35555 2871 aaKnown RBP10.04□□□□□ -0.8
SRP54-206ENST00000555317 ZNF879B4DU55 563 aa10.04□□□□□ -0.8
SRP54-206ENST00000555317 E9PI62 339 aa10.04□□□□□ -0.8
SRP54-206ENST00000555317 SIGLEC5O15389 551 aa10.04□□□□□ -0.8
SRP54-206ENST00000555317 XPNPEP2O43895 674 aa10.04□□□□□ -0.8
SRP54-206ENST00000555317 CD2P06729 351 aa10.04□□□□□ -0.8
SRP54-206ENST00000555317 HCKP08631 526 aa10.04□□□□□ -0.8
SRP54-206ENST00000555317 PSG2P11465 335 aa10.04□□□□□ -0.8
SRP54-206ENST00000555317 ATF1P18846 271 aa10.04□□□□□ -0.8
SRP54-206ENST00000555317 MPZP25189 248 aa10.04□□□□□ -0.8
SRP54-206ENST00000555317 AZGP1P25311 298 aaKnown RBP10.04□□□□□ -0.8
SRP54-206ENST00000555317 POU3F4P49335 361 aa10.04□□□□□ -0.8
SRP54-206ENST00000555317 FGF12P61328 243 aa10.04□□□□□ -0.8
SRP54-206ENST00000555317 PAX2Q02962 417 aa10.04□□□□□ -0.8
SRP54-206ENST00000555317 ATPAF1Q5TC12 328 aaPredicted RBP10.04□□□□□ -0.8
SRP54-206ENST00000555317 OR2G6Q5TZ20 316 aa10.04□□□□□ -0.8
SRP54-206ENST00000555317 SLC25A26Q70HW3 274 aa10.04□□□□□ -0.8
SRP54-206ENST00000555317 CALHM1Q8IU99 346 aa10.04□□□□□ -0.8
SRP54-206ENST00000555317 MKXQ8IYA7 352 aa10.04□□□□□ -0.8
SRP54-206ENST00000555317 Q8IYB0 196 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms