RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 GPANK1O95872 356 aa12.46□□□□□ -0.41
VTI1B-204ENST00000554659 HOXC4P09017 264 aaPredicted RBP12.46□□□□□ -0.41
VTI1B-204ENST00000554659 PAX5Q02548 391 aa12.46□□□□□ -0.41
VTI1B-204ENST00000554659 DUSP2Q05923 314 aa12.46□□□□□ -0.41
VTI1B-204ENST00000554659 RAB32Q13637 225 aa12.46□□□□□ -0.41
VTI1B-204ENST00000554659 Q8IYB0 196 aa12.46□□□□□ -0.41
VTI1B-204ENST00000554659 MRPS24Q96EL2 167 aaKnown RBP12.46□□□□□ -0.41
VTI1B-204ENST00000554659 WSB1Q9Y6I7 421 aa12.46□□□□□ -0.41
VTI1B-204ENST00000554659 TMEM230Q96A57 120 aa12.46□□□□□ -0.42
VTI1B-204ENST00000554659 CLDN23Q96B33 292 aa12.46□□□□□ -0.42
VTI1B-204ENST00000554659 UBE2ZQ9H832 354 aaPredicted RBP12.46□□□□□ -0.42
VTI1B-204ENST00000554659 TIMM9Q9Y5J7 89 aa12.46□□□□□ -0.42
VTI1B-204ENST00000554659 POMT1Q9Y6A1 747 aa12.46□□□□□ -0.42
VTI1B-204ENST00000554659 METTL12A8MUP2 240 aa12.46□□□□□ -0.42
VTI1B-204ENST00000554659 SOX15O60248 233 aa12.46□□□□□ -0.42
VTI1B-204ENST00000554659 ZNF816Q0VGE8 651 aaPredicted RBP12.46□□□□□ -0.42
VTI1B-204ENST00000554659 SP6Q3SY56 376 aa12.46□□□□□ -0.42
VTI1B-204ENST00000554659 RAB40CQ96S21 281 aa12.46□□□□□ -0.42
VTI1B-204ENST00000554659 ZNF426Q9BUY5 554 aa12.46□□□□□ -0.42
VTI1B-204ENST00000554659 SLC35B3Q9H1N7 401 aa12.46□□□□□ -0.42
VTI1B-204ENST00000554659 NAT8BQ9UHF3 227 aa12.46□□□□□ -0.42
VTI1B-204ENST00000554659 NHSL1Q5SYE7 1610 aa12.46□□□□□ -0.42
VTI1B-204ENST00000554659 LOC102724200A0A096LPH7 203 aaPredicted RBP12.45□□□□□ -0.42
VTI1B-204ENST00000554659 CDC14BO60729 498 aa12.45□□□□□ -0.42
VTI1B-204ENST00000554659 ZBTB25P24278 435 aa12.45□□□□□ -0.42
VTI1B-204ENST00000554659 ASCL1P50553 236 aa12.45□□□□□ -0.42
VTI1B-204ENST00000554659 GPM6AP51674 278 aa12.45□□□□□ -0.42
VTI1B-204ENST00000554659 RNASEKQ6P5S7 137 aaKnown RBP12.45□□□□□ -0.42
VTI1B-204ENST00000554659 LILRA6Q6PI73 481 aa12.45□□□□□ -0.42
VTI1B-204ENST00000554659 SCMH1Q96GD3 660 aa12.45□□□□□ -0.42
VTI1B-204ENST00000554659 MIXL1Q9H2W2 232 aa12.45□□□□□ -0.42
VTI1B-204ENST00000554659 TEX50A0A1B0GTY4 177 aa12.45□□□□□ -0.42
VTI1B-204ENST00000554659 CLDN34H7C241 214 aa12.45□□□□□ -0.42
VTI1B-204ENST00000554659 SPINK4O60575 86 aa12.45□□□□□ -0.42
VTI1B-204ENST00000554659 PRDX4Q13162 271 aa12.45□□□□□ -0.42
VTI1B-204ENST00000554659 IL13RA2Q14627 380 aa12.45□□□□□ -0.42
VTI1B-204ENST00000554659 ETFBKMTQ8IXQ9 262 aa12.45□□□□□ -0.42
VTI1B-204ENST00000554659 TRIB1Q96RU8 372 aa12.45□□□□□ -0.42
VTI1B-204ENST00000554659 RASL12Q9NYN1 266 aa12.45□□□□□ -0.42
VTI1B-204ENST00000554659 TMEM30CPA0ZSE6 113 aa12.45□□□□□ -0.42
VTI1B-204ENST00000554659 LY86O95711 162 aa12.45□□□□□ -0.42
VTI1B-204ENST00000554659 VN1R4Q7Z5H5 301 aa12.45□□□□□ -0.42
VTI1B-204ENST00000554659 ZNF547Q8IVP9 402 aa12.45□□□□□ -0.42
VTI1B-204ENST00000554659 COX14Q96I36 57 aa12.45□□□□□ -0.42
VTI1B-204ENST00000554659 MS4A10Q96PG2 267 aa12.45□□□□□ -0.42
VTI1B-204ENST00000554659 FFAR1O14842 300 aa12.45□□□□□ -0.42
VTI1B-204ENST00000554659 GYPAP02724 150 aa12.45□□□□□ -0.42
VTI1B-204ENST00000554659 GABRG2P18507 467 aa12.45□□□□□ -0.42
VTI1B-204ENST00000554659 SELENOPP49908 381 aa12.45□□□□□ -0.42
VTI1B-204ENST00000554659 FAM3AP98173 230 aa12.45□□□□□ -0.42
VTI1B-204ENST00000554659 PCED1AQ9H1Q7 454 aa12.45□□□□□ -0.42
VTI1B-204ENST00000554659 LOXL2Q9Y4K0 774 aa12.45□□□□□ -0.42
VTI1B-204ENST00000554659 B3GNTL1Q67FW5 361 aaPredicted RBP12.44□□□□□ -0.42
VTI1B-204ENST00000554659 PWWP2BQ6NUJ5 590 aa12.44□□□□□ -0.42
VTI1B-204ENST00000554659 TIMD4Q96H15 378 aa12.44□□□□□ -0.42
VTI1B-204ENST00000554659 ACY3Q96HD9 319 aa12.44□□□□□ -0.42
VTI1B-204ENST00000554659 LRFN3Q9BTN0 628 aa12.44□□□□□ -0.42
VTI1B-204ENST00000554659 NAA60Q9H7X0 242 aa12.44□□□□□ -0.42
VTI1B-204ENST00000554659 ABCA3Q99758 1704 aa12.44□□□□□ -0.42
VTI1B-204ENST00000554659 IL2RAP01589 272 aa12.44□□□□□ -0.42
VTI1B-204ENST00000554659 SLC37A1P57057 533 aa12.44□□□□□ -0.42
VTI1B-204ENST00000554659 NHLH1Q02575 133 aa12.44□□□□□ -0.42
VTI1B-204ENST00000554659 NHLH2Q02577 135 aa12.44□□□□□ -0.42
VTI1B-204ENST00000554659 GLI3P10071 1580 aa12.44□□□□□ -0.42
VTI1B-204ENST00000554659 SLC22A20A6NK97 555 aa12.44□□□□□ -0.42
VTI1B-204ENST00000554659 ONECUT2O95948 504 aa12.44□□□□□ -0.42
VTI1B-204ENST00000554659 GNG3P63215 75 aa12.44□□□□□ -0.42
VTI1B-204ENST00000554659 SMAD4Q13485 552 aaKnown RBP12.44□□□□□ -0.42
VTI1B-204ENST00000554659 TMEM183BQ1AE95 376 aa12.44□□□□□ -0.42
VTI1B-204ENST00000554659 TMEM215Q68D42 235 aa12.44□□□□□ -0.42
VTI1B-204ENST00000554659 C9orf62Q8N4C0 152 aa12.44□□□□□ -0.42
VTI1B-204ENST00000554659 TCTEX1D1Q8N7M0 179 aa12.44□□□□□ -0.42
VTI1B-204ENST00000554659 ZPBPQ9BS86 351 aa12.44□□□□□ -0.42
VTI1B-204ENST00000554659 VN1R1Q9GZP7 353 aa12.44□□□□□ -0.42
VTI1B-204ENST00000554659 MRM2Q9UI43 246 aaKnown RBP12.44□□□□□ -0.42
VTI1B-204ENST00000554659 LEUTXA8MZ59 168 aa12.44□□□□□ -0.42
VTI1B-204ENST00000554659 RER1O15258 196 aa12.44□□□□□ -0.42
VTI1B-204ENST00000554659 CD160O95971 181 aa12.44□□□□□ -0.42
VTI1B-204ENST00000554659 LIMK1P53667 647 aa12.44□□□□□ -0.42
VTI1B-204ENST00000554659 JMJD6Q6NYC1 403 aaPredicted RBP12.44□□□□□ -0.42
VTI1B-204ENST00000554659 CNTD2Q9H8S5 307 aa12.44□□□□□ -0.42
VTI1B-204ENST00000554659 UQCC1Q9NVA1 299 aa12.44□□□□□ -0.42
VTI1B-204ENST00000554659 SERGEFQ9UGK8 458 aa12.44□□□□□ -0.42
VTI1B-204ENST00000554659 ARID1AO14497 2285 aa12.44□□□□□ -0.42
VTI1B-204ENST00000554659 A0A1B0GTH9 108 aa12.43□□□□□ -0.42
VTI1B-204ENST00000554659 KIAA1324LA8MWY0 1029 aaPredicted RBP12.43□□□□□ -0.42
VTI1B-204ENST00000554659 TOX3O15405 576 aaPredicted RBP12.43□□□□□ -0.42
VTI1B-204ENST00000554659 GALR1P47211 349 aa12.43□□□□□ -0.42
VTI1B-204ENST00000554659 SLC16A13Q7RTY0 426 aa12.43□□□□□ -0.42
VTI1B-204ENST00000554659 PLPP3O14495 311 aa12.43□□□□□ -0.42
VTI1B-204ENST00000554659 INHBBP09529 407 aa12.43□□□□□ -0.42
VTI1B-204ENST00000554659 PMS2P11Q13670 270 aa12.43□□□□□ -0.42
VTI1B-204ENST00000554659 OR2A2Q6IF42 318 aa12.43□□□□□ -0.42
VTI1B-204ENST00000554659 DHRS11Q6UWP2 260 aa12.43□□□□□ -0.42
VTI1B-204ENST00000554659 PRSS41Q7RTY9 318 aa12.43□□□□□ -0.42
VTI1B-204ENST00000554659 GPR137Q96N19 417 aa12.43□□□□□ -0.42
VTI1B-204ENST00000554659 ACSM6Q6P461 480 aa12.43□□□□□ -0.42
VTI1B-204ENST00000554659 MRGPREQ86SM8 312 aa12.43□□□□□ -0.42
VTI1B-204ENST00000554659 SPEM1Q8N4L4 309 aa12.43□□□□□ -0.42
VTI1B-204ENST00000554659 OCIAD1Q9NX40 245 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms