RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 PARP12Q9H0J9 701 aaKnown RBP6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 TAF9BQ9HBM6 251 aa6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 PLEK2Q9NYT0 353 aa6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 RCC2Q9P258 522 aaKnown RBP6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 AK3Q9UIJ7 227 aa6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 FOXD3Q9UJU5 478 aaPredicted RBP6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 AMDHD2Q9Y303 409 aa6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 LSM5Q9Y4Y9 91 aaKnown RBP6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 PCDHGA1Q9Y5H4 931 aa6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 KLF2Q9Y5W3 355 aaPredicted RBP6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 TNRC18O15417 2968 aaPredicted RBP6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 CRYM-AS1A6NIL9 109 aa6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 SERPINE3A8MV23 424 aa6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 FAM157AC9JC47 383 aa6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 TNFSF11O14788 317 aa6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 DHHO43323 396 aa6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 ZIC3O60481 467 aa6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 SCGB1D2O95969 90 aa6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 SFTA3P0C7M3 94 aa6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 OR8U9P0C7N5 309 aa6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 TMEM225BP0DP42 221 aa6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 GLI4P10075 376 aa6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 LIFP15018 202 aa6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 PVALBP20472 110 aaPredicted RBP6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 ADH6P28332 368 aa6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 EIF1P41567 113 aaKnown RBP6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 ZNF133P52736 654 aaPredicted RBP6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 CHAF1BQ13112 559 aa6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 TAF9Q16594 264 aa6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 SP6Q3SY56 376 aa6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 ZNF468Q5VIY5 522 aaPredicted RBP6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 GGNBP1Q5YKI7 109 aa6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 RPUSD3Q6P087 351 aaKnown RBP6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 IL34Q6ZMJ4 242 aa6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 BATF2Q8N1L9 274 aa6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 OR8U1Q8NH10 309 aa6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 PP6455Q8WZ26 134 aa6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 TOMM40LQ969M1 308 aa6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 SGK3Q96BR1 496 aa6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 SULT4A1Q9BR01 284 aa6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 CNTNAP3Q9BZ76 1288 aa6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 ESRP2Q9H6T0 727 aaKnown RBP6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 UBE2ZQ9H832 354 aaPredicted RBP6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 DNAJB11Q9UBS4 358 aa6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 C14orf166Q9Y224 244 aaKnown RBP6.04□□□□□ -1.44
LINC-ROR-201ENST00000553704 IGHV1-45A0A0A0MS14 117 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 IGKV1-12A0A0C4DH73 117 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 A0A0J9YW62 118 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 FAM230AA0A1W2PPH8 454 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 NPIPA2E9PIF3 369 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 NPIPA3F8WFD2 350 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 TLX3O43711 291 aaPredicted RBP6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 DEDDO75618 318 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 ONECUT2O95948 504 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 IGKV1D-12P01611 117 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 COX6A1P12074 109 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 CRYGSP22914 178 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 RPL12P30050 165 aaKnown RBP6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 FCGR2CP31995 323 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 RBMXP38159 391 aaKnown RBP6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 RPL35P42766 123 aaKnown RBP6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 CAV2P51636 162 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 ZNF528Q3MIS6 628 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 PIGYQ3MUY2 71 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 ZNF774Q6NX45 483 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 BTNL8Q6UX41 500 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 Q6ZRG5 221 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 Q6ZSR3 168 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 SULF2Q8IWU5 870 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 SPEM1Q8N4L4 309 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 FNDC9Q8TBE3 224 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 C2CD4CQ8TF44 421 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 SCGB3A2Q96PL1 93 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 ALKBH3Q96Q83 286 aaPredicted RBP6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 S100A13Q99584 98 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 SEC11CQ9BY50 192 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 ULBP2Q9BZM5 246 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 PLEKHJ1Q9NW61 149 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 C1orf123Q9NWV4 160 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 GHRLQ9UBU3 117 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 C19orf25Q9UFG5 118 aaPredicted RBP6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 ANXA10Q9UJ72 324 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 ZDHHC8Q9ULC8 765 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 ZNF175Q9Y473 711 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 MUC3AQ02505 3323 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 H7C2Y5 167 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 TP53I11O14683 189 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 RRP8O43159 456 aaKnown RBP6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 ZNHIT1O43257 154 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 XRCC2O43543 280 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 CTSDP07339 412 aaPredicted RBP6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 FCGR3AP08637 254 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 PET100P0DJ07 73 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 CD80P33681 288 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 AKR1C3P42330 323 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 SULT1A2P50226 295 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 NOVA1P51513 510 aaKnown RBP6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 MTCP1P56278 107 aa6.03□□□□□ -1.44
LINC-ROR-201ENST00000553704 STARD6P59095 220 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms