RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 THRSPQ92748 146 aa12.45□□□□□ -0.42
MTHFD1-204ENST00000553405 MRPS26Q9BYN8 205 aaKnown RBP12.45□□□□□ -0.42
MTHFD1-204ENST00000553405 TMEM165Q9HC07 324 aa12.45□□□□□ -0.42
MTHFD1-204ENST00000553405 HES4Q9HCC6 221 aa12.45□□□□□ -0.42
MTHFD1-204ENST00000553405 SLC7A11Q9UPY5 501 aa12.45□□□□□ -0.42
MTHFD1-204ENST00000553405 NPTNQ9Y639 398 aa12.45□□□□□ -0.42
MTHFD1-204ENST00000553405 YLPM1P49750 1951 aaKnown RBP12.44□□□□□ -0.42
MTHFD1-204ENST00000553405 IGKV1-12A0A0C4DH73 117 aa12.44□□□□□ -0.42
MTHFD1-204ENST00000553405 A6NLC8 198 aa12.44□□□□□ -0.42
MTHFD1-204ENST00000553405 IGKV1D-12P01611 117 aa12.44□□□□□ -0.42
MTHFD1-204ENST00000553405 SLC25A16P16260 332 aa12.44□□□□□ -0.42
MTHFD1-204ENST00000553405 FGF9P31371 208 aaPredicted RBP12.44□□□□□ -0.42
MTHFD1-204ENST00000553405 GPR6P46095 362 aaPredicted RBP12.44□□□□□ -0.42
MTHFD1-204ENST00000553405 IL24Q13007 206 aa12.44□□□□□ -0.42
MTHFD1-204ENST00000553405 KISS1Q15726 138 aa12.44□□□□□ -0.42
MTHFD1-204ENST00000553405 CARTPTQ16568 116 aa12.44□□□□□ -0.42
MTHFD1-204ENST00000553405 AVPI1Q5T686 147 aa12.44□□□□□ -0.42
MTHFD1-204ENST00000553405 TEX36Q5VZQ5 186 aa12.44□□□□□ -0.42
MTHFD1-204ENST00000553405 ASCL4Q6XD76 172 aa12.44□□□□□ -0.42
MTHFD1-204ENST00000553405 LRRC28Q86X40 367 aaPredicted RBP12.44□□□□□ -0.42
MTHFD1-204ENST00000553405 CIARTQ8N365 385 aaPredicted RBP12.44□□□□□ -0.42
MTHFD1-204ENST00000553405 OR13F1Q8NGS4 319 aa12.44□□□□□ -0.42
MTHFD1-204ENST00000553405 HPS1Q92902 700 aa12.44□□□□□ -0.42
MTHFD1-204ENST00000553405 TMIGD2Q96BF3 282 aa12.44□□□□□ -0.42
MTHFD1-204ENST00000553405 SEH1LQ96EE3 360 aa12.44□□□□□ -0.42
MTHFD1-204ENST00000553405 BORCS8Q96FH0 119 aa12.44□□□□□ -0.42
MTHFD1-204ENST00000553405 ZNF488Q96MN9 340 aa12.44□□□□□ -0.42
MTHFD1-204ENST00000553405 NKX3-1Q99801 234 aaPredicted RBP12.44□□□□□ -0.42
MTHFD1-204ENST00000553405 NRIP2Q9BQI9 281 aa12.44□□□□□ -0.42
MTHFD1-204ENST00000553405 PIMREGQ9BSJ6 248 aa12.44□□□□□ -0.42
MTHFD1-204ENST00000553405 WDR13Q9H1Z4 485 aa12.44□□□□□ -0.42
MTHFD1-204ENST00000553405 TMEM138Q9NPI0 162 aa12.44□□□□□ -0.42
MTHFD1-204ENST00000553405 MTCH1Q9NZJ7 389 aa12.44□□□□□ -0.42
MTHFD1-204ENST00000553405 LRRC30A6NM36 301 aa12.43□□□□□ -0.42
MTHFD1-204ENST00000553405 PPIHO43447 177 aaKnown RBP12.43□□□□□ -0.42
MTHFD1-204ENST00000553405 ZNF205O95201 554 aa12.43□□□□□ -0.42
MTHFD1-204ENST00000553405 CD36P16671 472 aa12.43□□□□□ -0.42
MTHFD1-204ENST00000553405 AMY2BP19961 511 aa12.43□□□□□ -0.42
MTHFD1-204ENST00000553405 GADD45AP24522 165 aa12.43□□□□□ -0.42
MTHFD1-204ENST00000553405 BDKRB2P30411 391 aa12.43□□□□□ -0.42
MTHFD1-204ENST00000553405 ATP1B3P54709 279 aa12.43□□□□□ -0.42
MTHFD1-204ENST00000553405 MTCP1P56278 107 aa12.43□□□□□ -0.42
MTHFD1-204ENST00000553405 LMO4P61968 165 aa12.43□□□□□ -0.42
MTHFD1-204ENST00000553405 BTG1P62324 171 aa12.43□□□□□ -0.42
MTHFD1-204ENST00000553405 PDZK1IP1Q13113 114 aa12.43□□□□□ -0.42
MTHFD1-204ENST00000553405 HSD17B12Q53GQ0 312 aa12.43□□□□□ -0.42
MTHFD1-204ENST00000553405 C1QL2Q7Z5L3 287 aa12.43□□□□□ -0.42
MTHFD1-204ENST00000553405 POC1AQ8NBT0 407 aa12.43□□□□□ -0.42
MTHFD1-204ENST00000553405 C19orf18Q8NEA5 215 aa12.43□□□□□ -0.42
MTHFD1-204ENST00000553405 OR11L1Q8NGX0 322 aa12.43□□□□□ -0.42
MTHFD1-204ENST00000553405 RFT1Q96AA3 541 aa12.43□□□□□ -0.42
MTHFD1-204ENST00000553405 C1orf147Q96MC9 270 aaPredicted RBP12.43□□□□□ -0.42
MTHFD1-204ENST00000553405 REG4Q9BYZ8 158 aa12.43□□□□□ -0.42
MTHFD1-204ENST00000553405 OR51E2Q9H255 320 aa12.43□□□□□ -0.42
MTHFD1-204ENST00000553405 STUB1Q9UNE7 303 aa12.43□□□□□ -0.42
MTHFD1-204ENST00000553405 TLN2Q9Y4G6 2542 aa12.43□□□□□ -0.42
MTHFD1-204ENST00000553405 F8P00451 2351 aa12.42□□□□□ -0.42
MTHFD1-204ENST00000553405 RNF223E7ERA6 249 aa12.42□□□□□ -0.42
MTHFD1-204ENST00000553405 LGALS8O00214 317 aa12.42□□□□□ -0.42
MTHFD1-204ENST00000553405 AKR7A2O43488 359 aa12.42□□□□□ -0.42
MTHFD1-204ENST00000553405 FCN3O75636 299 aa12.42□□□□□ -0.42
MTHFD1-204ENST00000553405 SRMP19623 302 aa12.42□□□□□ -0.42
MTHFD1-204ENST00000553405 IL2RGP31785 369 aa12.42□□□□□ -0.42
MTHFD1-204ENST00000553405 CD80P33681 288 aa12.42□□□□□ -0.42
MTHFD1-204ENST00000553405 PPP3R1P63098 170 aa12.42□□□□□ -0.42
MTHFD1-204ENST00000553405 LOXL1Q08397 574 aaPredicted RBP12.42□□□□□ -0.42
MTHFD1-204ENST00000553405 ZNF404Q494X3 552 aa12.42□□□□□ -0.42
MTHFD1-204ENST00000553405 TMEM155Q4W5P6 130 aa12.42□□□□□ -0.42
MTHFD1-204ENST00000553405 DDI2Q5TDH0 399 aa12.42□□□□□ -0.42
MTHFD1-204ENST00000553405 SLC25A26Q70HW3 274 aa12.42□□□□□ -0.42
MTHFD1-204ENST00000553405 FAM90A1Q86YD7 464 aa12.42□□□□□ -0.42
MTHFD1-204ENST00000553405 CDH26Q8IXH8 852 aa12.42□□□□□ -0.42
MTHFD1-204ENST00000553405 Q8NFD4 153 aa12.42□□□□□ -0.42
MTHFD1-204ENST00000553405 COX4I2Q96KJ9 171 aa12.42□□□□□ -0.42
MTHFD1-204ENST00000553405 VCX3AQ9NNX9 186 aa12.42□□□□□ -0.42
MTHFD1-204ENST00000553405 TXNL4BQ9NX01 149 aaKnown RBP12.42□□□□□ -0.42
MTHFD1-204ENST00000553405 CKLFQ9UBR5 152 aa12.42□□□□□ -0.42
MTHFD1-204ENST00000553405 ZNF222Q9UK12 451 aa12.42□□□□□ -0.42
MTHFD1-204ENST00000553405 CSPG4Q6UVK1 2322 aa12.42□□□□□ -0.42
MTHFD1-204ENST00000553405 PPIAL4EA0A075B759 164 aa12.41□□□□□ -0.42
MTHFD1-204ENST00000553405 TRAV1-2A0A0B4J238 106 aa12.41□□□□□ -0.42
MTHFD1-204ENST00000553405 hCG_1807616A0A1W2PRN6 198 aa12.41□□□□□ -0.42
MTHFD1-204ENST00000553405 F5H0A9 414 aaPredicted RBP12.41□□□□□ -0.42
MTHFD1-204ENST00000553405 PPIAL4DF5H284 164 aa12.41□□□□□ -0.42
MTHFD1-204ENST00000553405 SPRY1O43609 319 aaPredicted RBP12.41□□□□□ -0.42
MTHFD1-204ENST00000553405 HCKP08631 526 aa12.41□□□□□ -0.42
MTHFD1-204ENST00000553405 PPIAL4FP0DN26 164 aa12.41□□□□□ -0.42
MTHFD1-204ENST00000553405 MDH2P40926 338 aaKnown RBP12.41□□□□□ -0.42
MTHFD1-204ENST00000553405 NPBWR2P48146 333 aa12.41□□□□□ -0.42
MTHFD1-204ENST00000553405 STUMQ69YW2 141 aa12.41□□□□□ -0.42
MTHFD1-204ENST00000553405 C22orf42Q6IC83 251 aa12.41□□□□□ -0.42
MTHFD1-204ENST00000553405 FAM166AQ6J272 317 aa12.41□□□□□ -0.42
MTHFD1-204ENST00000553405 NR2C2APQ86WQ0 139 aa12.41□□□□□ -0.42
MTHFD1-204ENST00000553405 SAXO1Q8IYX7 474 aa12.41□□□□□ -0.42
MTHFD1-204ENST00000553405 C1orf87Q8N0U7 546 aa12.41□□□□□ -0.42
MTHFD1-204ENST00000553405 ZSCAN4Q8NAM6 433 aaPredicted RBP12.41□□□□□ -0.42
MTHFD1-204ENST00000553405 OR5D18Q8NGL1 313 aa12.41□□□□□ -0.42
MTHFD1-204ENST00000553405 CLDND2Q8NHS1 167 aa12.41□□□□□ -0.42
MTHFD1-204ENST00000553405 RAB1CQ92928 201 aa12.41□□□□□ -0.42
MTHFD1-204ENST00000553405 C1orf159Q96HA4 380 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms