RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 CHCHD7Q9BUK0 85 aa3.1□□□□□ -1.91
SCFD1-209ENST00000553280 NLE1Q9NVX2 485 aaPredicted RBP3.1□□□□□ -1.91
SCFD1-209ENST00000553280 PRO0628Q9UI54 55 aa3.1□□□□□ -1.91
SCFD1-209ENST00000553280 FADS3Q9Y5Q0 445 aa3.1□□□□□ -1.91
SCFD1-209ENST00000553280 SIGLEC1Q9BZZ2 1709 aa3.1□□□□□ -1.91
SCFD1-209ENST00000553280 IGHV3-49A0A0A0MS15 119 aa3.09□□□□□ -1.91
SCFD1-209ENST00000553280 SGCEO43556 437 aa3.09□□□□□ -1.91
SCFD1-209ENST00000553280 SCN2BO60939 215 aa3.09□□□□□ -1.91
SCFD1-209ENST00000553280 YEATS4O95619 227 aa3.09□□□□□ -1.91
SCFD1-209ENST00000553280 HLA-DQB1P01920 261 aa3.09□□□□□ -1.91
SCFD1-209ENST00000553280 SLAMF1Q13291 335 aa3.09□□□□□ -1.91
SCFD1-209ENST00000553280 OR4D1Q15615 310 aa3.09□□□□□ -1.91
SCFD1-209ENST00000553280 ZBTB6Q15916 424 aa3.09□□□□□ -1.91
SCFD1-209ENST00000553280 PDPK2PQ6A1A2 396 aa3.09□□□□□ -1.91
SCFD1-209ENST00000553280 AHSA2Q719I0 299 aa3.09□□□□□ -1.91
SCFD1-209ENST00000553280 LRRC6Q86X45 466 aa3.09□□□□□ -1.91
SCFD1-209ENST00000553280 BBS7Q8IWZ6 715 aa3.09□□□□□ -1.91
SCFD1-209ENST00000553280 SPICQ8N5J4 248 aa3.09□□□□□ -1.91
SCFD1-209ENST00000553280 LRRC52Q8N7C0 313 aa3.09□□□□□ -1.91
SCFD1-209ENST00000553280 NECAP1Q8NC96 275 aa3.09□□□□□ -1.91
SCFD1-209ENST00000553280 OR5T1Q8NG75 326 aa3.09□□□□□ -1.91
SCFD1-209ENST00000553280 OR8G5Q8NG78 346 aa3.09□□□□□ -1.91
SCFD1-209ENST00000553280 OR2M7Q8NG81 312 aa3.09□□□□□ -1.91
SCFD1-209ENST00000553280 OR2L8Q8NGY9 312 aa3.09□□□□□ -1.91
SCFD1-209ENST00000553280 CLHC1Q8NHS4 586 aa3.09□□□□□ -1.91
SCFD1-209ENST00000553280 PDCD6IPQ8WUM4 868 aaKnown RBP3.09□□□□□ -1.91
SCFD1-209ENST00000553280 CATSPER2Q96P56 530 aa3.09□□□□□ -1.91
SCFD1-209ENST00000553280 CDX2Q99626 313 aaPredicted RBP3.09□□□□□ -1.91
SCFD1-209ENST00000553280 SHCBP1LQ9BZQ2 653 aa3.09□□□□□ -1.91
SCFD1-209ENST00000553280 MS4A12Q9NXJ0 267 aa3.09□□□□□ -1.91
SCFD1-209ENST00000553280 ENPP5Q9UJA9 477 aa3.09□□□□□ -1.91
SCFD1-209ENST00000553280 ENPP4Q9Y6X5 453 aa3.09□□□□□ -1.91
SCFD1-209ENST00000553280 CENPVL3A0A0U1RRI6 287 aa3.08□□□□□ -1.92
SCFD1-209ENST00000553280 A0A1W2PNU3 283 aaPredicted RBP3.08□□□□□ -1.92
SCFD1-209ENST00000553280 ISPDA4D126 451 aa3.08□□□□□ -1.92
SCFD1-209ENST00000553280 TRPC5OSA6NMA1 111 aa3.08□□□□□ -1.92
SCFD1-209ENST00000553280 CENPBD1B2RD01 187 aa3.08□□□□□ -1.92
SCFD1-209ENST00000553280 SCO1O75880 301 aa3.08□□□□□ -1.92
SCFD1-209ENST00000553280 CCNKO75909 580 aa3.08□□□□□ -1.92
SCFD1-209ENST00000553280 MRPL3P09001 348 aaKnown RBP3.08□□□□□ -1.92
SCFD1-209ENST00000553280 SLC35E2BP0CK96 405 aa3.08□□□□□ -1.92
SCFD1-209ENST00000553280 MAGEA6P43360 314 aa3.08□□□□□ -1.92
SCFD1-209ENST00000553280 RAB38P57729 211 aa3.08□□□□□ -1.92
SCFD1-209ENST00000553280 PFN3P60673 137 aa3.08□□□□□ -1.92
SCFD1-209ENST00000553280 TPBGQ13641 420 aa3.08□□□□□ -1.92
SCFD1-209ENST00000553280 SYCP1Q15431 976 aa3.08□□□□□ -1.92
SCFD1-209ENST00000553280 CEACAM16Q2WEN9 425 aa3.08□□□□□ -1.92
SCFD1-209ENST00000553280 HBMQ6B0K9 141 aa3.08□□□□□ -1.92
SCFD1-209ENST00000553280 ZNF695Q8IW36 515 aa3.08□□□□□ -1.92
SCFD1-209ENST00000553280 SLC25A29Q8N8R3 303 aa3.08□□□□□ -1.92
SCFD1-209ENST00000553280 OR4K2Q8NGD2 314 aa3.08□□□□□ -1.92
SCFD1-209ENST00000553280 OR5M1Q8NGP8 315 aa3.08□□□□□ -1.92
SCFD1-209ENST00000553280 OR13G1Q8NGZ3 307 aa3.08□□□□□ -1.92
SCFD1-209ENST00000553280 ZNF461Q8TAF7 563 aa3.08□□□□□ -1.92
SCFD1-209ENST00000553280 IFT81Q8WYA0 676 aa3.08□□□□□ -1.92
SCFD1-209ENST00000553280 OR5P2Q8WZ92 322 aa3.08□□□□□ -1.92
SCFD1-209ENST00000553280 FRZBQ92765 325 aa3.08□□□□□ -1.92
SCFD1-209ENST00000553280 L3HYPDHQ96EM0 354 aa3.08□□□□□ -1.92
SCFD1-209ENST00000553280 SMIM8Q96KF7 97 aa3.08□□□□□ -1.92
SCFD1-209ENST00000553280 RNF157Q96PX1 679 aa3.08□□□□□ -1.92
SCFD1-209ENST00000553280 SPACA5Q96QH8 159 aa3.08□□□□□ -1.92
SCFD1-209ENST00000553280 SDHCQ99643 169 aaPredicted RBP3.08□□□□□ -1.92
SCFD1-209ENST00000553280 RNF5Q99942 180 aa3.08□□□□□ -1.92
SCFD1-209ENST00000553280 KRTAP4-3Q9BYR4 195 aa3.08□□□□□ -1.92
SCFD1-209ENST00000553280 NXF2Q9GZY0 626 aaKnown RBP3.08□□□□□ -1.92
SCFD1-209ENST00000553280 METTL8Q9H825 291 aaKnown RBP3.08□□□□□ -1.92
SCFD1-209ENST00000553280 USH1CQ9Y6N9 552 aa3.08□□□□□ -1.92
SCFD1-209ENST00000553280 AK9Q5TCS8 1911 aa3.08□□□□□ -1.92
SCFD1-209ENST00000553280 OR2AT4A6NND4 320 aa3.07□□□□□ -1.92
SCFD1-209ENST00000553280 UPK1AO00322 258 aa3.07□□□□□ -1.92
SCFD1-209ENST00000553280 CDIPTO14735 213 aa3.07□□□□□ -1.92
SCFD1-209ENST00000553280 SHOX2O60902 331 aaPredicted RBP3.07□□□□□ -1.92
SCFD1-209ENST00000553280 NDUFS6O75380 124 aaKnown RBP3.07□□□□□ -1.92
SCFD1-209ENST00000553280 OR4Q2P0C623 313 aa3.07□□□□□ -1.92
SCFD1-209ENST00000553280 GTF2H1P32780 548 aa3.07□□□□□ -1.92
SCFD1-209ENST00000553280 GRB2P62993 217 aaKnown RBP3.07□□□□□ -1.92
SCFD1-209ENST00000553280 ADIGQ0VDE8 80 aa3.07□□□□□ -1.92
SCFD1-209ENST00000553280 CDC20Q12834 499 aa3.07□□□□□ -1.92
SCFD1-209ENST00000553280 PMVKQ15126 192 aa3.07□□□□□ -1.92
SCFD1-209ENST00000553280 BSXQ3C1V8 233 aa3.07□□□□□ -1.92
SCFD1-209ENST00000553280 C5orf47Q569G3 176 aa3.07□□□□□ -1.92
SCFD1-209ENST00000553280 UGT2A3Q6UWM9 527 aa3.07□□□□□ -1.92
SCFD1-209ENST00000553280 CLEC19AQ6UXS0 136 aa3.07□□□□□ -1.92
SCFD1-209ENST00000553280 MRPL52Q86TS9 123 aaKnown RBP3.07□□□□□ -1.92
SCFD1-209ENST00000553280 RNF10Q8N5U6 811 aaKnown RBP3.07□□□□□ -1.92
SCFD1-209ENST00000553280 CCNYL1Q8N7R7 359 aa3.07□□□□□ -1.92
SCFD1-209ENST00000553280 OR9A2Q8NGT5 310 aa3.07□□□□□ -1.92
SCFD1-209ENST00000553280 CCDC12Q8WUD4 166 aaPredicted RBP3.07□□□□□ -1.92
SCFD1-209ENST00000553280 ESR2Q92731 530 aa3.07□□□□□ -1.92
SCFD1-209ENST00000553280 HGDQ93099 445 aa3.07□□□□□ -1.92
SCFD1-209ENST00000553280 DOK1Q99704 481 aa3.07□□□□□ -1.92
SCFD1-209ENST00000553280 ZNF649Q9BS31 505 aa3.07□□□□□ -1.92
SCFD1-209ENST00000553280 ABCB9Q9NP78 766 aa3.07□□□□□ -1.92
SCFD1-209ENST00000553280 IFT46Q9NQC8 304 aa3.07□□□□□ -1.92
SCFD1-209ENST00000553280 C21orf62Q9NYP8 219 aa3.07□□□□□ -1.92
SCFD1-209ENST00000553280 CBY1Q9Y3M2 126 aa3.07□□□□□ -1.92
SCFD1-209ENST00000553280 ADAMTSL3P82987 1691 aa3.07□□□□□ -1.92
SCFD1-209ENST00000553280 IGKV2D-24A0A075B6R9 120 aa3.06□□□□□ -1.92
SCFD1-209ENST00000553280 A0A0G2JMP0 313 aa3.06□□□□□ -1.92
SCFD1-209ENST00000553280 A0A0X1KG70 313 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms