RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 UPRTQ96BW1 309 aa8.43□□□□□ -1.06
TMEM116-216ENST00000552800 SNRNP40Q96DI7 357 aaKnown RBP8.43□□□□□ -1.06
TMEM116-216ENST00000552800 BORCS8Q96FH0 119 aa8.43□□□□□ -1.06
TMEM116-216ENST00000552800 SLC25A21Q9BQT8 299 aaPredicted RBP8.43□□□□□ -1.06
TMEM116-216ENST00000552800 TMEM59Q9BXS4 323 aa8.43□□□□□ -1.06
TMEM116-216ENST00000552800 PKIBQ9C010 78 aa8.43□□□□□ -1.06
TMEM116-216ENST00000552800 IFT22Q9H7X7 185 aa8.43□□□□□ -1.06
TMEM116-216ENST00000552800 PLEKHA6Q9Y2H5 1048 aa8.43□□□□□ -1.06
TMEM116-216ENST00000552800 ZGRF1Q86YA3 2104 aa8.42□□□□□ -1.06
TMEM116-216ENST00000552800 SVILO95425 2214 aa8.42□□□□□ -1.06
TMEM116-216ENST00000552800 SPTBN2O15020 2390 aa8.42□□□□□ -1.06
TMEM116-216ENST00000552800 TMEM8BA6NDV4 472 aa8.42□□□□□ -1.06
TMEM116-216ENST00000552800 PRRG2O14669 202 aa8.42□□□□□ -1.06
TMEM116-216ENST00000552800 SMPD2O60906 423 aa8.42□□□□□ -1.06
TMEM116-216ENST00000552800 NOS1APO75052 506 aaPredicted RBP8.42□□□□□ -1.06
TMEM116-216ENST00000552800 PTBP3O95758 552 aaKnown RBP8.42□□□□□ -1.06
TMEM116-216ENST00000552800 GTF2F2P13984 249 aa8.42□□□□□ -1.06
TMEM116-216ENST00000552800 MGMTP16455 207 aa8.42□□□□□ -1.06
TMEM116-216ENST00000552800 IL24Q13007 206 aa8.42□□□□□ -1.06
TMEM116-216ENST00000552800 TATDN3Q17R31 274 aa8.42□□□□□ -1.06
TMEM116-216ENST00000552800 VAX1Q5SQQ9 334 aa8.42□□□□□ -1.06
TMEM116-216ENST00000552800 C9orf135Q5VTT2 229 aa8.42□□□□□ -1.06
TMEM116-216ENST00000552800 OR10K2Q6IF99 312 aa8.42□□□□□ -1.06
TMEM116-216ENST00000552800 Q6ZS49 121 aa8.42□□□□□ -1.06
TMEM116-216ENST00000552800 BHLHA15Q7RTS1 189 aaPredicted RBP8.42□□□□□ -1.06
TMEM116-216ENST00000552800 LINC00596Q86U02 117 aa8.42□□□□□ -1.06
TMEM116-216ENST00000552800 IZUMO1Q8IYV9 350 aa8.42□□□□□ -1.06
TMEM116-216ENST00000552800 DTX3Q8N9I9 347 aa8.42□□□□□ -1.06
TMEM116-216ENST00000552800 TNFAIP8L1Q8WVP5 186 aa8.42□□□□□ -1.06
TMEM116-216ENST00000552800 HPSE2Q8WWQ2 592 aa8.42□□□□□ -1.06
TMEM116-216ENST00000552800 MARS2Q96GW9 593 aaKnown RBP8.42□□□□□ -1.06
TMEM116-216ENST00000552800 DMRTA2Q96SC8 542 aa8.42□□□□□ -1.06
TMEM116-216ENST00000552800 KRTAP4-12Q9BQ66 201 aa8.42□□□□□ -1.06
TMEM116-216ENST00000552800 BCL2L14Q9BZR8 327 aa8.42□□□□□ -1.06
TMEM116-216ENST00000552800 MMP28Q9H239 520 aa8.42□□□□□ -1.06
TMEM116-216ENST00000552800 PRORYQ9H606 182 aa8.42□□□□□ -1.06
TMEM116-216ENST00000552800 GPR173Q9NS66 373 aa8.42□□□□□ -1.06
TMEM116-216ENST00000552800 DECR2Q9NUI1 292 aa8.42□□□□□ -1.06
TMEM116-216ENST00000552800 EDARQ9UNE0 448 aa8.42□□□□□ -1.06
TMEM116-216ENST00000552800 N6AMT1Q9Y5N5 214 aa8.42□□□□□ -1.06
TMEM116-216ENST00000552800 POLEQ07864 2286 aa8.42□□□□□ -1.06
TMEM116-216ENST00000552800 IGKV1-12A0A0C4DH73 117 aa8.41□□□□□ -1.06
TMEM116-216ENST00000552800 SNRPGP15A8MWD9 76 aa8.41□□□□□ -1.06
TMEM116-216ENST00000552800 SOCS1O15524 211 aa8.41□□□□□ -1.06
TMEM116-216ENST00000552800 SSX5O60225 188 aa8.41□□□□□ -1.06
TMEM116-216ENST00000552800 LYZL6O75951 148 aa8.41□□□□□ -1.06
TMEM116-216ENST00000552800 IGKV1D-12P01611 117 aa8.41□□□□□ -1.06
TMEM116-216ENST00000552800 GIFP27352 417 aa8.41□□□□□ -1.06
TMEM116-216ENST00000552800 VEGFCP49767 419 aa8.41□□□□□ -1.06
TMEM116-216ENST00000552800 PER3P56645 1201 aa8.41□□□□□ -1.06
TMEM116-216ENST00000552800 RAB25P57735 213 aa8.41□□□□□ -1.06
TMEM116-216ENST00000552800 MEF2DQ14814 521 aa8.41□□□□□ -1.06
TMEM116-216ENST00000552800 DAZAP2Q15038 168 aaPredicted RBP8.41□□□□□ -1.06
TMEM116-216ENST00000552800 RBMS2Q15434 407 aaKnown RBP8.41□□□□□ -1.06
TMEM116-216ENST00000552800 ACTBL2Q562R1 376 aa8.41□□□□□ -1.06
TMEM116-216ENST00000552800 TMEM255AQ5JRV8 349 aa8.41□□□□□ -1.06
TMEM116-216ENST00000552800 SIGIRRQ6IA17 410 aa8.41□□□□□ -1.06
TMEM116-216ENST00000552800 TMEM211Q6ICI0 200 aa8.41□□□□□ -1.06
TMEM116-216ENST00000552800 STEAP1BQ6NZ63 245 aa8.41□□□□□ -1.06
TMEM116-216ENST00000552800 Q6ZTK2 550 aa8.41□□□□□ -1.06
TMEM116-216ENST00000552800 MRPL21Q7Z2W9 205 aaKnown RBP8.41□□□□□ -1.06
TMEM116-216ENST00000552800 CD163Q86VB7 1156 aa8.41□□□□□ -1.06
TMEM116-216ENST00000552800 CXorf67Q86X51 503 aaPredicted RBP8.41□□□□□ -1.06
TMEM116-216ENST00000552800 HOGA1Q86XE5 327 aa8.41□□□□□ -1.06
TMEM116-216ENST00000552800 MKXQ8IYA7 352 aa8.41□□□□□ -1.06
TMEM116-216ENST00000552800 ZDHHC23Q8IYP9 409 aa8.41□□□□□ -1.06
TMEM116-216ENST00000552800 CNEP1R1Q8N9A8 125 aa8.41□□□□□ -1.06
TMEM116-216ENST00000552800 SPERTQ8NA61 448 aa8.41□□□□□ -1.06
TMEM116-216ENST00000552800 DRAXINQ8NBI3 349 aaPredicted RBP8.41□□□□□ -1.06
TMEM116-216ENST00000552800 OR56B2PQ8NGI1 322 aa8.41□□□□□ -1.06
TMEM116-216ENST00000552800 PIGCQ92535 297 aa8.41□□□□□ -1.06
TMEM116-216ENST00000552800 RAB3CQ96E17 227 aa8.41□□□□□ -1.06
TMEM116-216ENST00000552800 ST6GAL2Q96JF0 529 aa8.41□□□□□ -1.06
TMEM116-216ENST00000552800 GPER1Q99527 375 aa8.41□□□□□ -1.06
TMEM116-216ENST00000552800 S100A13Q99584 98 aa8.41□□□□□ -1.06
TMEM116-216ENST00000552800 VKORC1Q9BQB6 163 aa8.41□□□□□ -1.06
TMEM116-216ENST00000552800 SELENOIQ9C0D9 397 aa8.41□□□□□ -1.06
TMEM116-216ENST00000552800 FGF23Q9GZV9 251 aaPredicted RBP8.41□□□□□ -1.06
TMEM116-216ENST00000552800 CHST6Q9GZX3 395 aa8.41□□□□□ -1.06
TMEM116-216ENST00000552800 TLNRD1Q9H1K6 362 aa8.41□□□□□ -1.06
TMEM116-216ENST00000552800 POFUT1Q9H488 388 aa8.41□□□□□ -1.06
TMEM116-216ENST00000552800 PLK3Q9H4B4 646 aa8.41□□□□□ -1.06
TMEM116-216ENST00000552800 RAXQ9Y2V3 346 aa8.41□□□□□ -1.06
TMEM116-216ENST00000552800 LAMA5O15230 3695 aa8.41□□□□□ -1.06
TMEM116-216ENST00000552800 hCG_2014768A0A024R1R8 64 aa8.4□□□□□ -1.06
TMEM116-216ENST00000552800 A0A1B0GUH1 482 aa8.4□□□□□ -1.06
TMEM116-216ENST00000552800 ZNF850A8MQ14 1090 aa8.4□□□□□ -1.06
TMEM116-216ENST00000552800 PEX14O75381 377 aa8.4□□□□□ -1.06
TMEM116-216ENST00000552800 RAD51DO75771 328 aa8.4□□□□□ -1.06
TMEM116-216ENST00000552800 MPIG6BO95866 241 aa8.4□□□□□ -1.06
TMEM116-216ENST00000552800 H2AFB2P0C5Z0 115 aa8.4□□□□□ -1.06
TMEM116-216ENST00000552800 ZNF250P15622 560 aa8.4□□□□□ -1.06
TMEM116-216ENST00000552800 DTYMKP23919 212 aa8.4□□□□□ -1.06
TMEM116-216ENST00000552800 CALCRP30988 508 aa8.4□□□□□ -1.06
TMEM116-216ENST00000552800 CFHR2P36980 270 aa8.4□□□□□ -1.06
TMEM116-216ENST00000552800 ID4P47928 161 aa8.4□□□□□ -1.06
TMEM116-216ENST00000552800 FGF12P61328 243 aa8.4□□□□□ -1.06
TMEM116-216ENST00000552800 ERVK11-1P61568 191 aa8.4□□□□□ -1.06
TMEM116-216ENST00000552800 PPP1CBP62140 327 aa8.4□□□□□ -1.06
TMEM116-216ENST00000552800 GNG3P63215 75 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms