RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	MKX	Q8IYA7	352 aa		10.86	□□□□□ -0.67
CACNB3-223	ENST00000552480	OSR2	Q8N2R0	312 aa		10.86	□□□□□ -0.67
CACNB3-223	ENST00000552480	CELF2-AS1	Q8N7Q2	184 aa		10.86	□□□□□ -0.67
CACNB3-223	ENST00000552480	OR8G5	Q8NG78	346 aa		10.86	□□□□□ -0.67
CACNB3-223	ENST00000552480	OR8S1	Q8NH09	359 aa		10.86	□□□□□ -0.67
CACNB3-223	ENST00000552480	OR51F2	Q8NH61	342 aa		10.86	□□□□□ -0.67
CACNB3-223	ENST00000552480	RAB3C	Q96E17	227 aa		10.86	□□□□□ -0.67
CACNB3-223	ENST00000552480	MRPS24	Q96EL2	167 aa	Known RBP	10.86	□□□□□ -0.67
CACNB3-223	ENST00000552480	MICU1	Q9BPX6	476 aa		10.86	□□□□□ -0.67
CACNB3-223	ENST00000552480	HRASLS	Q9HDD0	168 aa		10.86	□□□□□ -0.67
CACNB3-223	ENST00000552480	ZNF107	Q9UII5	783 aa	Predicted RBP	10.86	□□□□□ -0.67
CACNB3-223	ENST00000552480	IGF2R	P11717	2491 aa		10.85	□□□□□ -0.67
CACNB3-223	ENST00000552480	DMXL2	Q8TDJ6	3036 aa		10.85	□□□□□ -0.67
CACNB3-223	ENST00000552480	BSN	Q9UPA5	3926 aa		10.85	□□□□□ -0.67
CACNB3-223	ENST00000552480	MFNG	O00587	321 aa		10.85	□□□□□ -0.67
CACNB3-223	ENST00000552480	AKR7A2	O43488	359 aa		10.85	□□□□□ -0.67
CACNB3-223	ENST00000552480	CYB5A	P00167	134 aa		10.85	□□□□□ -0.67
CACNB3-223	ENST00000552480	MT-ND4	P03905	459 aa		10.85	□□□□□ -0.67
CACNB3-223	ENST00000552480	GNB3	P16520	340 aa		10.85	□□□□□ -0.67
CACNB3-223	ENST00000552480	CHRNB4	P30926	498 aa		10.85	□□□□□ -0.67
CACNB3-223	ENST00000552480	RCVRN	P35243	200 aa		10.85	□□□□□ -0.67
CACNB3-223	ENST00000552480	TMEM50B	P56557	158 aa		10.85	□□□□□ -0.67
CACNB3-223	ENST00000552480	SNTB2	Q13425	540 aa	Known RBP	10.85	□□□□□ -0.67
CACNB3-223	ENST00000552480	PCGF3	Q3KNV8	242 aa		10.85	□□□□□ -0.67
CACNB3-223	ENST00000552480	ALKBH6	Q3KRA9	238 aa		10.85	□□□□□ -0.67
CACNB3-223	ENST00000552480	PLA1A	Q53H76	456 aa		10.85	□□□□□ -0.67
CACNB3-223	ENST00000552480	TMEM255A	Q5JRV8	349 aa		10.85	□□□□□ -0.67
CACNB3-223	ENST00000552480	PLAC9	Q5JTB6	97 aa		10.85	□□□□□ -0.67
CACNB3-223	ENST00000552480	RGS7BP	Q6MZT1	257 aa	Predicted RBP	10.85	□□□□□ -0.67
CACNB3-223	ENST00000552480	PLET1	Q6UQ28	207 aa		10.85	□□□□□ -0.67
CACNB3-223	ENST00000552480	FJX1	Q86VR8	437 aa		10.85	□□□□□ -0.67
CACNB3-223	ENST00000552480		Q8NFD4	153 aa		10.85	□□□□□ -0.67
CACNB3-223	ENST00000552480	POM121	Q96HA1	1249 aa		10.85	□□□□□ -0.67
CACNB3-223	ENST00000552480	ADAT1	Q9BUB4	502 aa	Known RBP	10.85	□□□□□ -0.67
CACNB3-223	ENST00000552480	PKIB	Q9C010	78 aa		10.85	□□□□□ -0.67
CACNB3-223	ENST00000552480	MMP28	Q9H239	520 aa		10.85	□□□□□ -0.67
CACNB3-223	ENST00000552480	DPAGT1	Q9H3H5	408 aa		10.85	□□□□□ -0.67
CACNB3-223	ENST00000552480	ZMAT3	Q9HA38	289 aa	Known RBP	10.85	□□□□□ -0.67
CACNB3-223	ENST00000552480	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	10.85	□□□□□ -0.67
CACNB3-223	ENST00000552480	NLK	Q9UBE8	527 aa		10.85	□□□□□ -0.67
CACNB3-223	ENST00000552480	ELF5	Q9UKW6	265 aa	Predicted RBP	10.85	□□□□□ -0.67
CACNB3-223	ENST00000552480	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	10.84	□□□□□ -0.67
CACNB3-223	ENST00000552480	LRP5L	A4QPB2	252 aa		10.84	□□□□□ -0.67
CACNB3-223	ENST00000552480	MEIS3P1	A6NDR6	274 aa		10.84	□□□□□ -0.67
CACNB3-223	ENST00000552480	TIMM8A	O60220	97 aa	Predicted RBP	10.84	□□□□□ -0.67
CACNB3-223	ENST00000552480	CA11	O75493	328 aa		10.84	□□□□□ -0.67
CACNB3-223	ENST00000552480	SFTPB	P07988	381 aa		10.84	□□□□□ -0.67
CACNB3-223	ENST00000552480	MPZ	P25189	248 aa		10.84	□□□□□ -0.67
CACNB3-223	ENST00000552480	CD40	P25942	277 aa		10.84	□□□□□ -0.67
CACNB3-223	ENST00000552480	BLVRB	P30043	206 aa	Predicted RBP	10.84	□□□□□ -0.67
CACNB3-223	ENST00000552480	FAU	P35544	74 aa	Known RBP	10.84	□□□□□ -0.67
CACNB3-223	ENST00000552480	GNG2	P59768	71 aa		10.84	□□□□□ -0.67
CACNB3-223	ENST00000552480	RPS23	P62266	143 aa	Known RBP	10.84	□□□□□ -0.67
CACNB3-223	ENST00000552480	NKX6-1	P78426	367 aa	Predicted RBP	10.84	□□□□□ -0.67
CACNB3-223	ENST00000552480	IL24	Q13007	206 aa		10.84	□□□□□ -0.67
CACNB3-223	ENST00000552480	OR8G1	Q15617	311 aa		10.84	□□□□□ -0.67
CACNB3-223	ENST00000552480	ELP2	Q6IA86	826 aa		10.84	□□□□□ -0.67
CACNB3-223	ENST00000552480	C22orf34	Q6ZV56	151 aa		10.84	□□□□□ -0.67
CACNB3-223	ENST00000552480	TRAPPC6B	Q86SZ2	158 aa		10.84	□□□□□ -0.67
CACNB3-223	ENST00000552480	GLCCI1	Q86VQ1	547 aa		10.84	□□□□□ -0.67
CACNB3-223	ENST00000552480	TMEM229B	Q8NBD8	167 aa		10.84	□□□□□ -0.67
CACNB3-223	ENST00000552480	SLAMF9	Q96A28	289 aa		10.84	□□□□□ -0.67
CACNB3-223	ENST00000552480	ARHGAP5-AS1	Q96IT6	56 aa		10.84	□□□□□ -0.67
CACNB3-223	ENST00000552480	PECR	Q9BY49	303 aa		10.84	□□□□□ -0.67
CACNB3-223	ENST00000552480	OR51I2	Q9H344	312 aa		10.84	□□□□□ -0.67
CACNB3-223	ENST00000552480	TMEM100	Q9NV29	134 aa		10.84	□□□□□ -0.67
CACNB3-223	ENST00000552480	COPZ2	Q9P299	210 aa		10.84	□□□□□ -0.67
CACNB3-223	ENST00000552480	LAMA5	O15230	3695 aa		10.83	□□□□□ -0.68
CACNB3-223	ENST00000552480	SVIL	O95425	2214 aa		10.83	□□□□□ -0.68
CACNB3-223	ENST00000552480		A0A1B0GWJ7	208 aa		10.83	□□□□□ -0.68
CACNB3-223	ENST00000552480	FAM90A10P	A6NDY2	464 aa		10.83	□□□□□ -0.68
CACNB3-223	ENST00000552480	FAM90A18P	A6NE21	464 aa		10.83	□□□□□ -0.68
CACNB3-223	ENST00000552480	FAM90A16P	A6NEW6	464 aa		10.83	□□□□□ -0.68
CACNB3-223	ENST00000552480	FAM90A20P	A6NIJ5	464 aa		10.83	□□□□□ -0.68
CACNB3-223	ENST00000552480	FAM90A8P	A6NJQ4	464 aa		10.83	□□□□□ -0.68
CACNB3-223	ENST00000552480	FAM90A7P	A6NKC0	464 aa		10.83	□□□□□ -0.68
CACNB3-223	ENST00000552480	TMEM210	A6NLX4	147 aa		10.83	□□□□□ -0.68
CACNB3-223	ENST00000552480	SERPINE3	A8MV23	424 aa		10.83	□□□□□ -0.68
CACNB3-223	ENST00000552480	FAM90A22P	A8MWA6	464 aa		10.83	□□□□□ -0.68
CACNB3-223	ENST00000552480	FAM90A12P	A8MX19	464 aa		10.83	□□□□□ -0.68
CACNB3-223	ENST00000552480	FAM90A5P	A8MXJ8	464 aa		10.83	□□□□□ -0.68
CACNB3-223	ENST00000552480	FAM90A23P	A8MXZ1	464 aa		10.83	□□□□□ -0.68
CACNB3-223	ENST00000552480	TRAPPC2L	H3BP13	241 aa		10.83	□□□□□ -0.68
CACNB3-223	ENST00000552480		J3QT63	122 aa		10.83	□□□□□ -0.68
CACNB3-223	ENST00000552480	SSX5	O60225	188 aa		10.83	□□□□□ -0.68
CACNB3-223	ENST00000552480	PFDN1	O60925	122 aa		10.83	□□□□□ -0.68
CACNB3-223	ENST00000552480	THBD	P07204	575 aa		10.83	□□□□□ -0.68
CACNB3-223	ENST00000552480	FAM90A15P	P0C7V4	464 aa		10.83	□□□□□ -0.68
CACNB3-223	ENST00000552480	FAM90A13P	P0C7W8	464 aa		10.83	□□□□□ -0.68
CACNB3-223	ENST00000552480	FAM90A14P	P0C7W9	464 aa		10.83	□□□□□ -0.68
CACNB3-223	ENST00000552480	FAM90A24P	P0C7X0	464 aa		10.83	□□□□□ -0.68
CACNB3-223	ENST00000552480	AKAIN1	P0CW23	69 aa		10.83	□□□□□ -0.68
CACNB3-223	ENST00000552480	ZNF250	P15622	560 aa		10.83	□□□□□ -0.68
CACNB3-223	ENST00000552480	BCL3	P20749	454 aa		10.83	□□□□□ -0.68
CACNB3-223	ENST00000552480	GABRR1	P24046	479 aa		10.83	□□□□□ -0.68
CACNB3-223	ENST00000552480	PTAFR	P25105	342 aa		10.83	□□□□□ -0.68
CACNB3-223	ENST00000552480	GLRX	P35754	106 aa		10.83	□□□□□ -0.68
CACNB3-223	ENST00000552480	CBX5	P45973	191 aa		10.83	□□□□□ -0.68
CACNB3-223	ENST00000552480	FABP6	P51161	128 aa		10.83	□□□□□ -0.68
CACNB3-223	ENST00000552480	RBM11	P57052	281 aa	Known RBP	10.83	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms