RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 NGFP01138 241 aa3.36□□□□□ -1.87
USP44-208ENST00000552440 GGT1P19440 569 aa3.36□□□□□ -1.87
USP44-208ENST00000552440 TAC1P20366 129 aa3.36□□□□□ -1.87
USP44-208ENST00000552440 CCR7P32248 378 aa3.36□□□□□ -1.87
USP44-208ENST00000552440 PPICP45877 212 aa3.36□□□□□ -1.87
USP44-208ENST00000552440 GCLMP48507 274 aa3.36□□□□□ -1.87
USP44-208ENST00000552440 APOC4P55056 127 aa3.36□□□□□ -1.87
USP44-208ENST00000552440 VSX2P58304 361 aaPredicted RBP3.36□□□□□ -1.87
USP44-208ENST00000552440 PFN3P60673 137 aa3.36□□□□□ -1.87
USP44-208ENST00000552440 LMO4P61968 165 aa3.36□□□□□ -1.87
USP44-208ENST00000552440 NUTF2P61970 127 aaKnown RBP3.36□□□□□ -1.87
USP44-208ENST00000552440 MXD1Q05195 221 aa3.36□□□□□ -1.87
USP44-208ENST00000552440 TSNQ15631 228 aaKnown RBP3.36□□□□□ -1.87
USP44-208ENST00000552440 LTB4RQ15722 352 aa3.36□□□□□ -1.87
USP44-208ENST00000552440 NRF1Q16656 503 aa3.36□□□□□ -1.87
USP44-208ENST00000552440 TNFAIP8L2Q6P589 184 aaPredicted RBP3.36□□□□□ -1.87
USP44-208ENST00000552440 XKRXQ6PP77 449 aa3.36□□□□□ -1.87
USP44-208ENST00000552440 BAIAP2L2Q6UXY1 529 aa3.36□□□□□ -1.87
USP44-208ENST00000552440 GLT6D1Q7Z4J2 308 aa3.36□□□□□ -1.87
USP44-208ENST00000552440 STX19Q8N4C7 294 aa3.36□□□□□ -1.87
USP44-208ENST00000552440 NRACQ8N912 160 aa3.36□□□□□ -1.87
USP44-208ENST00000552440 SLC26A10Q8NG04 563 aa3.36□□□□□ -1.87
USP44-208ENST00000552440 OR6T1Q8NGN1 323 aa3.36□□□□□ -1.87
USP44-208ENST00000552440 FGF14Q92915 247 aa3.36□□□□□ -1.87
USP44-208ENST00000552440 UCN3Q969E3 161 aa3.36□□□□□ -1.87
USP44-208ENST00000552440 YIPF5Q969M3 257 aa3.36□□□□□ -1.87
USP44-208ENST00000552440 C11orf52Q96A22 123 aa3.36□□□□□ -1.87
USP44-208ENST00000552440 TMEM230Q96A57 120 aa3.36□□□□□ -1.87
USP44-208ENST00000552440 PPCDCQ96CD2 204 aa3.36□□□□□ -1.87
USP44-208ENST00000552440 SMIM12Q96EX1 92 aa3.36□□□□□ -1.87
USP44-208ENST00000552440 BTF3L4Q96K17 158 aa3.36□□□□□ -1.87
USP44-208ENST00000552440 C9orf85Q96MD7 179 aa3.36□□□□□ -1.87
USP44-208ENST00000552440 SIGMAR1Q99720 223 aa3.36□□□□□ -1.87
USP44-208ENST00000552440 MED18Q9BUE0 208 aa3.36□□□□□ -1.87
USP44-208ENST00000552440 IL25Q9H293 177 aa3.36□□□□□ -1.87
USP44-208ENST00000552440 MIXL1Q9H2W2 232 aa3.36□□□□□ -1.87
USP44-208ENST00000552440 DEPPQ9NTK1 212 aa3.36□□□□□ -1.87
USP44-208ENST00000552440 RBM22Q9NW64 420 aaKnown RBP eCLIP3.36□□□□□ -1.87
USP44-208ENST00000552440 THYN1Q9P016 225 aa3.36□□□□□ -1.87
USP44-208ENST00000552440 SPRR3Q9UBC9 169 aa3.36□□□□□ -1.87
USP44-208ENST00000552440 RAB22AQ9UL26 194 aa3.36□□□□□ -1.87
USP44-208ENST00000552440 UFC1Q9Y3C8 167 aa3.36□□□□□ -1.87
USP44-208ENST00000552440 SLC22A7Q9Y694 548 aa3.36□□□□□ -1.87
USP44-208ENST00000552440 NLRP1Q9C000 1473 aa3.36□□□□□ -1.87
USP44-208ENST00000552440 SUPT6HQ7KZ85 1726 aaKnown RBP3.36□□□□□ -1.87
USP44-208ENST00000552440 ROBO1Q9Y6N7 1651 aa3.36□□□□□ -1.87
USP44-208ENST00000552440 NHSL1Q5SYE7 1610 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 RAPGEF6Q8TEU7 1601 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 NWD1Q149M9 1564 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 A0A087WUJ7 227 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 ZNF726A6NNF4 738 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 CHP2O43745 196 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 FOXH1O75593 365 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 IFNA1P01562 189 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 ADRB3P13945 408 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 MYL12AP19105 171 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 PFN2P35080 140 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 SRP9P49458 86 aaKnown RBP3.35□□□□□ -1.87
USP44-208ENST00000552440 CSRP3P50461 194 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 PDLIM4P50479 330 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 PAX9P55771 341 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 BAXQ07812 192 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 SMAGPQ0VAQ4 97 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 HIST2H3PS2Q5TEC6 136 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 C1orf195Q5TG92 126 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 C5orf46Q6UWT4 87 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 MRPL55Q7Z7F7 128 aaKnown RBP3.35□□□□□ -1.87
USP44-208ENST00000552440 RDH10Q8IZV5 341 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 ZFP41Q8N8Y5 198 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 OR13D1Q8NGV5 346 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 OR10A6Q8NH74 314 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 RNASE11Q8TAA1 199 aaKnown RBP3.35□□□□□ -1.87
USP44-208ENST00000552440 NT5CQ8TCD5 201 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 TMED6Q8WW62 240 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 CLDN23Q96B33 292 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 ZNF486Q96H40 463 aaPredicted RBP3.35□□□□□ -1.87
USP44-208ENST00000552440 MEIS3Q99687 375 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 SEC22CQ9BRL7 303 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 TXNIPQ9H3M7 391 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 VSIRQ9H7M9 311 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 ANXA10Q9UJ72 324 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 OR52A1Q9UKL2 312 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 ST3GAL6Q9Y274 331 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 PRELID3BQ9Y3B1 194 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 STRCP1A6NGW2 1772 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 POLR1AO95602 1720 aaPredicted RBP3.35□□□□□ -1.87
USP44-208ENST00000552440 BLMP54132 1417 aaPredicted RBP3.35□□□□□ -1.87
USP44-208ENST00000552440 A0A1W2PP64 1363 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 NID2Q14112 1375 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 A0A0G2JMP0 313 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 TRABD2BA6NFA1 517 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 ZNF98A6NK75 572 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 DHRS7CA6NNS2 312 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 EVPLLA8MZ36 301 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 PPP5D1E7EU14 171 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 H7C1H1 209 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 TCAPO15273 167 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 CA11O75493 328 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 RP2O75695 350 aa3.35□□□□□ -1.87
USP44-208ENST00000552440 S1PR2O95136 353 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms