RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 KPNA4O00629 521 aaPredicted RBP4.99□□□□□ -1.61
VPS29-210ENST00000552130 TRMUO75648 421 aaKnown RBP4.99□□□□□ -1.61
VPS29-210ENST00000552130 NXPH4O95158 308 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 CRYZL1O95825 349 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 PTHP01270 115 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 IGKV1D-16P01601 117 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 APOC1P02654 83 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 THY1P04216 161 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 HCKP08631 526 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 GNB3P16520 340 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 ATF1P18846 271 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 CERS1P27544 350 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 S100GP29377 79 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 MYCNOSP40205 109 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 ERVFC1-1P60608 527 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 NAA20P61599 178 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 SLC10A2Q12908 348 aaPredicted RBP4.99□□□□□ -1.61
VPS29-210ENST00000552130 SRSF7Q16629 238 aaKnown RBP eCLIP4.99□□□□□ -1.61
VPS29-210ENST00000552130 CDNFQ49AH0 187 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 TRMT12Q53H54 448 aaKnown RBP4.99□□□□□ -1.61
VPS29-210ENST00000552130 PAGE3Q5JUK9 113 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 OTPQ5XKR4 325 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 OR10K2Q6IF99 312 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 SFXN4Q6P4A7 337 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 FOXL2NBQ6ZUU3 175 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 FAM183BPQ6ZVS7 135 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 PIP4P1Q86T03 277 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 LRRTM1Q86UE6 522 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 PPP1R27Q86WC6 154 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 CATSPER3Q86XQ3 398 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 UBL4BQ8N7F7 174 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 CHST4Q8NCG5 386 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 OR1L8Q8NGR8 309 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 ZFP90Q8TF47 636 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 SSC4DQ8WTU2 575 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 SDR42E1Q8WUS8 393 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 HAUS1Q96CS2 278 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 PITX2Q99697 317 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 KIR2DL4Q99706 377 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 SULT4A1Q9BR01 284 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 SEC22CQ9BRL7 303 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 RNF126Q9BV68 326 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 SELENOIQ9C0D9 397 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 IL25Q9H293 177 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 DCSTAMPQ9H295 470 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 RPF2Q9H7B2 306 aaKnown RBP4.99□□□□□ -1.61
VPS29-210ENST00000552130 ENY2Q9NPA8 101 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 TMEM138Q9NPI0 162 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 DOK5Q9P104 306 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 OPTCQ9UBM4 332 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 VAX2Q9UIW0 290 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 RARRES3Q9UL19 164 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 SLC35A3Q9Y2D2 325 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 HSPB11Q9Y547 144 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 NID2Q14112 1375 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 RALGAPA1Q6GYQ0 2036 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 A0A0B4J2A0 478 aa4.98□□□□□ -1.61
VPS29-210ENST00000552130 IGKV1D-13A0A0B4J2D9 117 aa4.98□□□□□ -1.61
VPS29-210ENST00000552130 TEX48A0A1B0GUV7 120 aa4.98□□□□□ -1.61
VPS29-210ENST00000552130 A0A1W2PS18 150 aa4.98□□□□□ -1.61
VPS29-210ENST00000552130 BHLHE40O14503 412 aa4.98□□□□□ -1.61
VPS29-210ENST00000552130 CST8O60676 142 aa4.98□□□□□ -1.61
VPS29-210ENST00000552130 OR7C1O76099 320 aaPredicted RBP4.98□□□□□ -1.61
VPS29-210ENST00000552130 IGHG1P01857 330 aa4.98□□□□□ -1.61
VPS29-210ENST00000552130 IGKV5-2P06315 115 aa4.98□□□□□ -1.61
VPS29-210ENST00000552130 EIF4EP06730 217 aaKnown RBP4.98□□□□□ -1.61
VPS29-210ENST00000552130 IGKV1-13P0DP09 117 aa4.98□□□□□ -1.61
VPS29-210ENST00000552130 HIST1H1TP22492 207 aaPredicted RBP4.98□□□□□ -1.61
VPS29-210ENST00000552130 TCTAP57738 103 aa4.98□□□□□ -1.61
VPS29-210ENST00000552130 MTPNP58546 118 aa4.98□□□□□ -1.61
VPS29-210ENST00000552130 RAP1BP61224 184 aa4.98□□□□□ -1.61
VPS29-210ENST00000552130 PSG4Q00888 419 aa4.98□□□□□ -1.61
VPS29-210ENST00000552130 IFITM2Q01629 132 aa4.98□□□□□ -1.61
VPS29-210ENST00000552130 SHHQ15465 462 aa4.98□□□□□ -1.61
VPS29-210ENST00000552130 TEAD2Q15562 447 aa4.98□□□□□ -1.61
VPS29-210ENST00000552130 CEACAM16Q2WEN9 425 aa4.98□□□□□ -1.61
VPS29-210ENST00000552130 C11orf71Q6IPW1 123 aa4.98□□□□□ -1.61
VPS29-210ENST00000552130 UFSP1Q6NVU6 142 aa4.98□□□□□ -1.61
VPS29-210ENST00000552130 PEX26Q7Z412 305 aa4.98□□□□□ -1.61
VPS29-210ENST00000552130 COX18Q8N8Q8 333 aa4.98□□□□□ -1.61
VPS29-210ENST00000552130 TMEM178AQ8NBL3 297 aa4.98□□□□□ -1.61
VPS29-210ENST00000552130 OR10G9Q8NGN4 311 aa4.98□□□□□ -1.61
VPS29-210ENST00000552130 OR4X1Q8NH49 305 aa4.98□□□□□ -1.61
VPS29-210ENST00000552130 C16orf52Q8NHV5 167 aa4.98□□□□□ -1.61
VPS29-210ENST00000552130 BLNKQ8WV28 456 aa4.98□□□□□ -1.61
VPS29-210ENST00000552130 CYGBQ8WWM9 190 aa4.98□□□□□ -1.61
VPS29-210ENST00000552130 RXFP2Q8WXD0 754 aa4.98□□□□□ -1.61
VPS29-210ENST00000552130 LRRC58Q96CX6 371 aa4.98□□□□□ -1.61
VPS29-210ENST00000552130 CNRIP1Q96F85 164 aaPredicted RBP4.98□□□□□ -1.61
VPS29-210ENST00000552130 BTN2A3PQ96KV6 586 aa4.98□□□□□ -1.61
VPS29-210ENST00000552130 ZNF354BQ96LW1 612 aa4.98□□□□□ -1.61
VPS29-210ENST00000552130 BIRC8Q96P09 236 aa4.98□□□□□ -1.61
VPS29-210ENST00000552130 PRSS22Q9GZN4 317 aa4.98□□□□□ -1.61
VPS29-210ENST00000552130 RGS18Q9NS28 235 aa4.98□□□□□ -1.61
VPS29-210ENST00000552130 SHPKQ9UHJ6 478 aa4.98□□□□□ -1.61
VPS29-210ENST00000552130 DKKL1Q9UK85 242 aa4.98□□□□□ -1.61
VPS29-210ENST00000552130 POLR1DQ9Y2S0 133 aa4.98□□□□□ -1.61
VPS29-210ENST00000552130 NUBP2Q9Y5Y2 271 aa4.98□□□□□ -1.61
VPS29-210ENST00000552130 SYNMO15061 1565 aa4.98□□□□□ -1.61
VPS29-210ENST00000552130 PCDH11XQ9BZA7 1347 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms