RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 GSC2O15499 205 aa11.42□□□□□ -0.58
CHMP1A-210ENST00000551981 RBP4P02753 201 aa11.42□□□□□ -0.58
CHMP1A-210ENST00000551981 ATP6V1B1P15313 513 aa11.42□□□□□ -0.58
CHMP1A-210ENST00000551981 MSX2P35548 267 aaPredicted RBP11.42□□□□□ -0.58
CHMP1A-210ENST00000551981 DYNLT3P51808 116 aa11.42□□□□□ -0.58
CHMP1A-210ENST00000551981 OR12D2P58182 307 aa11.42□□□□□ -0.58
CHMP1A-210ENST00000551981 CD83Q01151 205 aa11.42□□□□□ -0.58
CHMP1A-210ENST00000551981 RIPPLY1Q0D2K3 151 aa11.42□□□□□ -0.58
CHMP1A-210ENST00000551981 ZNF273Q14593 569 aa11.42□□□□□ -0.58
CHMP1A-210ENST00000551981 PLCXD3Q63HM9 321 aa11.42□□□□□ -0.58
CHMP1A-210ENST00000551981 MOB3CQ70IA8 216 aa11.42□□□□□ -0.58
CHMP1A-210ENST00000551981 TEX47Q8TBZ9 253 aa11.42□□□□□ -0.58
CHMP1A-210ENST00000551981 WWC2-AS2Q96NR7 200 aa11.42□□□□□ -0.58
CHMP1A-210ENST00000551981 DGCR6LQ9BY27 220 aa11.42□□□□□ -0.58
CHMP1A-210ENST00000551981 OR51V1Q9H2C8 321 aa11.42□□□□□ -0.58
CHMP1A-210ENST00000551981 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.42□□□□□ -0.58
CHMP1A-210ENST00000551981 A0A0U1RQV5 110 aa11.41□□□□□ -0.58
CHMP1A-210ENST00000551981 ACOD1A6NK06 481 aa11.41□□□□□ -0.58
CHMP1A-210ENST00000551981 C17orf98A8MV24 154 aa11.41□□□□□ -0.58
CHMP1A-210ENST00000551981 E9PQ18 207 aa11.41□□□□□ -0.58
CHMP1A-210ENST00000551981 SYNGR1O43759 233 aa11.41□□□□□ -0.58
CHMP1A-210ENST00000551981 SASH3O75995 380 aa11.41□□□□□ -0.58
CHMP1A-210ENST00000551981 NXPH2O95156 264 aa11.41□□□□□ -0.58
CHMP1A-210ENST00000551981 CLIC3O95833 236 aa11.41□□□□□ -0.58
CHMP1A-210ENST00000551981 TK1P04183 234 aa11.41□□□□□ -0.58
CHMP1A-210ENST00000551981 PGA5P0DJD9 388 aa11.41□□□□□ -0.58
CHMP1A-210ENST00000551981 PIPP12273 146 aaPredicted RBP11.41□□□□□ -0.58
CHMP1A-210ENST00000551981 H2AFXP16104 143 aaPredicted RBP11.41□□□□□ -0.58
CHMP1A-210ENST00000551981 AZGP1P25311 298 aaKnown RBP11.41□□□□□ -0.58
CHMP1A-210ENST00000551981 BLCAPP62952 87 aa11.41□□□□□ -0.58
CHMP1A-210ENST00000551981 CD69Q07108 199 aa11.41□□□□□ -0.58
CHMP1A-210ENST00000551981 DYNC1I2Q13409 638 aaKnown RBP11.41□□□□□ -0.58
CHMP1A-210ENST00000551981 MICAQ29983 383 aa11.41□□□□□ -0.58
CHMP1A-210ENST00000551981 TMEM95Q3KNT9 176 aa11.41□□□□□ -0.58
CHMP1A-210ENST00000551981 ZNF626Q68DY1 528 aa11.41□□□□□ -0.58
CHMP1A-210ENST00000551981 LCN8Q6JVE9 175 aa11.41□□□□□ -0.58
CHMP1A-210ENST00000551981 KRT77Q7Z794 578 aa11.41□□□□□ -0.58
CHMP1A-210ENST00000551981 ZNF573Q86YE8 665 aa11.41□□□□□ -0.58
CHMP1A-210ENST00000551981 OR11H6Q8NGC7 330 aa11.41□□□□□ -0.58
CHMP1A-210ENST00000551981 ZNF488Q96MN9 340 aa11.41□□□□□ -0.58
CHMP1A-210ENST00000551981 MYLK2Q9H1R3 596 aa11.41□□□□□ -0.58
CHMP1A-210ENST00000551981 MUC13Q9H3R2 512 aa11.41□□□□□ -0.58
CHMP1A-210ENST00000551981 OR14J1Q9UGF5 321 aa11.41□□□□□ -0.58
CHMP1A-210ENST00000551981 POLDIP2Q9Y2S7 368 aa11.41□□□□□ -0.58
CHMP1A-210ENST00000551981 TSSC4Q9Y5U2 329 aaPredicted RBP11.41□□□□□ -0.58
CHMP1A-210ENST00000551981 TCRBV4S1A1TA0A5B7 111 aa11.4□□□□□ -0.58
CHMP1A-210ENST00000551981 PRR23D1E9PI22 279 aaPredicted RBP11.4□□□□□ -0.58
CHMP1A-210ENST00000551981 H3BN98 237 aa11.4□□□□□ -0.58
CHMP1A-210ENST00000551981 SELENOFO60613 162 aa11.4□□□□□ -0.58
CHMP1A-210ENST00000551981 PRR23D2P0DMB1 279 aaPredicted RBP11.4□□□□□ -0.58
CHMP1A-210ENST00000551981 HAAOP46952 286 aa11.4□□□□□ -0.58
CHMP1A-210ENST00000551981 CEBPDP49716 269 aaPredicted RBP11.4□□□□□ -0.58
CHMP1A-210ENST00000551981 DLX6P56179 175 aa11.4□□□□□ -0.58
CHMP1A-210ENST00000551981 ZNF684Q5T5D7 378 aa11.4□□□□□ -0.58
CHMP1A-210ENST00000551981 LCN1P1Q5VSP4 162 aa11.4□□□□□ -0.58
CHMP1A-210ENST00000551981 Q6ZS46 218 aa11.4□□□□□ -0.58
CHMP1A-210ENST00000551981 CENPVQ7Z7K6 275 aaPredicted RBP11.4□□□□□ -0.58
CHMP1A-210ENST00000551981 PGAM4Q8N0Y7 254 aa11.4□□□□□ -0.58
CHMP1A-210ENST00000551981 IQCF1Q8N6M8 205 aa11.4□□□□□ -0.58
CHMP1A-210ENST00000551981 DPF1Q92782 380 aa11.4□□□□□ -0.58
CHMP1A-210ENST00000551981 CDRT15Q96T59 188 aa11.4□□□□□ -0.58
CHMP1A-210ENST00000551981 GPR61Q9BZJ8 451 aa11.4□□□□□ -0.58
CHMP1A-210ENST00000551981 REEP1Q9H902 201 aa11.4□□□□□ -0.58
CHMP1A-210ENST00000551981 ENPP5Q9UJA9 477 aa11.4□□□□□ -0.58
CHMP1A-210ENST00000551981 LAMP5Q9UJQ1 280 aa11.4□□□□□ -0.58
CHMP1A-210ENST00000551981 PIGLQ9Y2B2 252 aa11.4□□□□□ -0.58
CHMP1A-210ENST00000551981 TMEM269A0A1B0GVZ9 245 aa11.39□□□□□ -0.59
CHMP1A-210ENST00000551981 WI2-2373I1.2A0A1W2PRP0 233 aa11.39□□□□□ -0.59
CHMP1A-210ENST00000551981 J3QT63 122 aa11.39□□□□□ -0.59
CHMP1A-210ENST00000551981 PRODHO43272 600 aa11.39□□□□□ -0.59
CHMP1A-210ENST00000551981 NOS1APO75052 506 aaPredicted RBP11.39□□□□□ -0.59
CHMP1A-210ENST00000551981 ZNF728P0DKX0 622 aa11.39□□□□□ -0.59
CHMP1A-210ENST00000551981 IGHV1-8P0DP01 117 aa11.39□□□□□ -0.59
CHMP1A-210ENST00000551981 MAGEA2P43356 314 aa11.39□□□□□ -0.59
CHMP1A-210ENST00000551981 KRTAP10-11P60412 298 aa11.39□□□□□ -0.59
CHMP1A-210ENST00000551981 SLC34A1Q06495 639 aa11.39□□□□□ -0.59
CHMP1A-210ENST00000551981 PPP1R8Q12972 351 aaKnown RBP11.39□□□□□ -0.59
CHMP1A-210ENST00000551981 DCTN2Q13561 401 aaKnown RBP11.39□□□□□ -0.59
CHMP1A-210ENST00000551981 SPATS1Q496A3 300 aa11.39□□□□□ -0.59
CHMP1A-210ENST00000551981 DMRTC1Q5HYR2 192 aa11.39□□□□□ -0.59
CHMP1A-210ENST00000551981 MINOS1Q5TGZ0 78 aa11.39□□□□□ -0.59
CHMP1A-210ENST00000551981 PLBD1Q6P4A8 553 aa11.39□□□□□ -0.59
CHMP1A-210ENST00000551981 KCTD18Q6PI47 426 aaPredicted RBP11.39□□□□□ -0.59
CHMP1A-210ENST00000551981 CD300LDQ6UXZ3 194 aa11.39□□□□□ -0.59
CHMP1A-210ENST00000551981 CCDC121Q6ZUS5 278 aa11.39□□□□□ -0.59
CHMP1A-210ENST00000551981 C16orf82Q7Z2V1 217 aa11.39□□□□□ -0.59
CHMP1A-210ENST00000551981 TRPM8Q7Z2W7 1104 aa11.39□□□□□ -0.59
CHMP1A-210ENST00000551981 ASCC1Q8N9N2 400 aaKnown RBP11.39□□□□□ -0.59
CHMP1A-210ENST00000551981 OR4X2Q8NGF9 303 aa11.39□□□□□ -0.59
CHMP1A-210ENST00000551981 CAPSLQ8WWF8 208 aa11.39□□□□□ -0.59
CHMP1A-210ENST00000551981 AKR1E2Q96JD6 320 aa11.39□□□□□ -0.59
CHMP1A-210ENST00000551981 OR8B4Q96RC9 309 aa11.39□□□□□ -0.59
CHMP1A-210ENST00000551981 NRIP2Q9BQI9 281 aa11.39□□□□□ -0.59
CHMP1A-210ENST00000551981 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.39□□□□□ -0.59
CHMP1A-210ENST00000551981 SAMHD1Q9Y3Z3 626 aaKnown RBP11.39□□□□□ -0.59
CHMP1A-210ENST00000551981 HILPDAQ9Y5L2 63 aa11.39□□□□□ -0.59
CHMP1A-210ENST00000551981 MINOS1-NBL1R4GNA1 71 aa11.39□□□□□ -0.59
CHMP1A-210ENST00000551981 U3KQV3 271 aa11.39□□□□□ -0.59
CHMP1A-210ENST00000551981 DSCAML1Q8TD84 2053 aa11.39□□□□□ -0.59
CHMP1A-210ENST00000551981 K7N7A8 449 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms