RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 GDNFP39905 211 aa17.1■□□□□ 0.33
CTDSP2-204ENST00000548823 EFNB2P52799 333 aa17.1■□□□□ 0.33
CTDSP2-204ENST00000548823 QRFPP83859 136 aa17.1■□□□□ 0.33
CTDSP2-204ENST00000548823 PLA2G7Q13093 441 aa17.1■□□□□ 0.33
CTDSP2-204ENST00000548823 GUSBP1Q15486 140 aa17.1■□□□□ 0.33
CTDSP2-204ENST00000548823 PLA1AQ53H76 456 aa17.1■□□□□ 0.33
CTDSP2-204ENST00000548823 CYB5R2Q6BCY4 276 aa17.1■□□□□ 0.33
CTDSP2-204ENST00000548823 RAB12Q6IQ22 244 aa17.1■□□□□ 0.33
CTDSP2-204ENST00000548823 TMEM53Q6P2H8 277 aa17.1■□□□□ 0.33
CTDSP2-204ENST00000548823 COLCA1Q6ZS62 124 aa17.1■□□□□ 0.33
CTDSP2-204ENST00000548823 FAM214BQ7L5A3 538 aa17.1■□□□□ 0.33
CTDSP2-204ENST00000548823 OR52I2Q8NH67 350 aa17.1■□□□□ 0.33
CTDSP2-204ENST00000548823 NUDT16L1Q9BRJ7 211 aaKnown RBP17.1■□□□□ 0.33
CTDSP2-204ENST00000548823 C1QTNF5Q9BXJ0 243 aa17.1■□□□□ 0.33
CTDSP2-204ENST00000548823 CHST5Q9GZS9 411 aa17.1■□□□□ 0.33
CTDSP2-204ENST00000548823 ETAA1Q9NY74 926 aa17.1■□□□□ 0.33
CTDSP2-204ENST00000548823 DYSFO75923 2080 aa17.1■□□□□ 0.33
CTDSP2-204ENST00000548823 HNRNPCP07910 306 aaKnown RBP eCLIP17.09■□□□□ 0.33
CTDSP2-204ENST00000548823 TRAPPC2P0DI81 140 aa17.09■□□□□ 0.33
CTDSP2-204ENST00000548823 TRAPPC2BP0DI82 140 aa17.09■□□□□ 0.33
CTDSP2-204ENST00000548823 ALDH3B1P43353 468 aa17.09■□□□□ 0.33
CTDSP2-204ENST00000548823 GSK3AP49840 483 aa17.09■□□□□ 0.33
CTDSP2-204ENST00000548823 BTG1P62324 171 aa17.09■□□□□ 0.33
CTDSP2-204ENST00000548823 FAPQ12884 760 aa17.09■□□□□ 0.33
CTDSP2-204ENST00000548823 FAM189A2Q15884 450 aa17.09■□□□□ 0.33
CTDSP2-204ENST00000548823 SNAI3Q3KNW1 292 aa17.09■□□□□ 0.33
CTDSP2-204ENST00000548823 SPSB4Q96A44 273 aa17.09■□□□□ 0.33
CTDSP2-204ENST00000548823 CREB3L1Q96BA8 519 aa17.09■□□□□ 0.33
CTDSP2-204ENST00000548823 ATG5Q9H1Y0 275 aa17.09■□□□□ 0.33
CTDSP2-204ENST00000548823 OR10A4Q9H209 315 aa17.09■□□□□ 0.33
CTDSP2-204ENST00000548823 NEK6Q9HC98 313 aa17.09■□□□□ 0.33
CTDSP2-204ENST00000548823 PLSCR4Q9NRQ2 329 aa17.09■□□□□ 0.33
CTDSP2-204ENST00000548823 GHRLQ9UBU3 117 aa17.09■□□□□ 0.33
CTDSP2-204ENST00000548823 ANKRD20A5PA0PJZ0 165 aa17.08■□□□□ 0.32
CTDSP2-204ENST00000548823 METTL21EPA6NDL7 271 aa17.08■□□□□ 0.32
CTDSP2-204ENST00000548823 LCATP04180 440 aa17.08■□□□□ 0.32
CTDSP2-204ENST00000548823 PATE4P0C8F1 98 aa17.08■□□□□ 0.32
CTDSP2-204ENST00000548823 BTCP35070 178 aa17.08■□□□□ 0.32
CTDSP2-204ENST00000548823 HGFACQ04756 655 aa17.08■□□□□ 0.32
CTDSP2-204ENST00000548823 GFOD2Q3B7J2 385 aa17.08■□□□□ 0.32
CTDSP2-204ENST00000548823 SFRP5Q5T4F7 317 aa17.08■□□□□ 0.32
CTDSP2-204ENST00000548823 ZBTB37Q5TC79 503 aa17.08■□□□□ 0.32
CTDSP2-204ENST00000548823 KRT74Q7RTS7 529 aa17.08■□□□□ 0.32
CTDSP2-204ENST00000548823 UBE2J2Q8N2K1 259 aa17.08■□□□□ 0.32
CTDSP2-204ENST00000548823 SEMA6DQ8NFY4 1073 aa17.08■□□□□ 0.32
CTDSP2-204ENST00000548823 OR1K1Q8NGR3 316 aa17.08■□□□□ 0.32
CTDSP2-204ENST00000548823 REEP6Q96HR9 211 aa17.08■□□□□ 0.32
CTDSP2-204ENST00000548823 ACTR6Q9GZN1 396 aa17.08■□□□□ 0.32
CTDSP2-204ENST00000548823 MMP28Q9H239 520 aa17.08■□□□□ 0.32
CTDSP2-204ENST00000548823 AUNIPQ9H7T9 357 aa17.08■□□□□ 0.32
CTDSP2-204ENST00000548823 TAS2R8Q9NYW2 309 aa17.08■□□□□ 0.32
CTDSP2-204ENST00000548823 NLKQ9UBE8 527 aa17.08■□□□□ 0.32
CTDSP2-204ENST00000548823 MALRD1Q5VYJ5 2156 aa17.07■□□□□ 0.32
CTDSP2-204ENST00000548823 IGKV1-9A0A0C4DH69 117 aa17.07■□□□□ 0.32
CTDSP2-204ENST00000548823 MEIOCA2RUB1 952 aa17.07■□□□□ 0.32
CTDSP2-204ENST00000548823 TMEM14DPA8MWL7 114 aa17.07■□□□□ 0.32
CTDSP2-204ENST00000548823 H7C417 338 aa17.07■□□□□ 0.32
CTDSP2-204ENST00000548823 RIPPLY1Q0D2K3 151 aa17.07■□□□□ 0.32
CTDSP2-204ENST00000548823 OLFML2AQ68BL7 652 aa17.07■□□□□ 0.32
CTDSP2-204ENST00000548823 CCDC36Q8IYA8 594 aa17.07■□□□□ 0.32
CTDSP2-204ENST00000548823 CPEB3Q8NE35 698 aaKnown RBP17.07■□□□□ 0.32
CTDSP2-204ENST00000548823 BCL2L2Q92843 193 aaPredicted RBP17.07■□□□□ 0.32
CTDSP2-204ENST00000548823 BOD1Q96IK1 185 aa17.07■□□□□ 0.32
CTDSP2-204ENST00000548823 DPAGT1Q9H3H5 408 aa17.07■□□□□ 0.32
CTDSP2-204ENST00000548823 SCPEP1Q9HB40 452 aa17.07■□□□□ 0.32
CTDSP2-204ENST00000548823 B3GNT2Q9NY97 397 aa17.07■□□□□ 0.32
CTDSP2-204ENST00000548823 MTFP1Q9UDX5 166 aa17.07■□□□□ 0.32
CTDSP2-204ENST00000548823 PRSS50Q9UI38 385 aa17.07■□□□□ 0.32
CTDSP2-204ENST00000548823 PIGLQ9Y2B2 252 aa17.07■□□□□ 0.32
CTDSP2-204ENST00000548823 TRAV18A0A075B6X5 111 aa17.06■□□□□ 0.32
CTDSP2-204ENST00000548823 HLA-DMAP28067 261 aa17.06■□□□□ 0.32
CTDSP2-204ENST00000548823 SRP9P49458 86 aaKnown RBP17.06■□□□□ 0.32
CTDSP2-204ENST00000548823 FOXG1P55316 489 aaPredicted RBP17.06■□□□□ 0.32
CTDSP2-204ENST00000548823 RAG2P55895 527 aa17.06■□□□□ 0.32
CTDSP2-204ENST00000548823 DSCR9P59020 149 aa17.06■□□□□ 0.32
CTDSP2-204ENST00000548823 SNTB2Q13425 540 aaKnown RBP17.06■□□□□ 0.32
CTDSP2-204ENST00000548823 ZNF672Q499Z4 452 aaPredicted RBP17.06■□□□□ 0.32
CTDSP2-204ENST00000548823 TMEM42Q69YG0 159 aa17.06■□□□□ 0.32
CTDSP2-204ENST00000548823 C12orf54Q6X4T0 127 aa17.06■□□□□ 0.32
CTDSP2-204ENST00000548823 ANGPTL5Q86XS5 388 aa17.06■□□□□ 0.32
CTDSP2-204ENST00000548823 PAQR4Q8N4S7 273 aaPredicted RBP17.06■□□□□ 0.32
CTDSP2-204ENST00000548823 FAM46BQ96A09 425 aa17.06■□□□□ 0.32
CTDSP2-204ENST00000548823 SPSB1Q96BD6 273 aa17.06■□□□□ 0.32
CTDSP2-204ENST00000548823 TRAF4Q9BUZ4 470 aaPredicted RBP17.06■□□□□ 0.32
CTDSP2-204ENST00000548823 NUBP2Q9Y5Y2 271 aa17.06■□□□□ 0.32
CTDSP2-204ENST00000548823 RBBP9O75884 186 aa17.05■□□□□ 0.32
CTDSP2-204ENST00000548823 KDM4BO94953 1096 aa17.05■□□□□ 0.32
CTDSP2-204ENST00000548823 CD8AP01732 235 aa17.05■□□□□ 0.32
CTDSP2-204ENST00000548823 CD3EP07766 207 aa17.05■□□□□ 0.32
CTDSP2-204ENST00000548823 HCKP08631 526 aa17.05■□□□□ 0.32
CTDSP2-204ENST00000548823 VSIG8P0DPA2 414 aa17.05■□□□□ 0.32
CTDSP2-204ENST00000548823 HOXB1P14653 301 aaPredicted RBP17.05■□□□□ 0.32
CTDSP2-204ENST00000548823 PRSS3P35030 304 aa17.05■□□□□ 0.32
CTDSP2-204ENST00000548823 OR8B8Q15620 311 aa17.05■□□□□ 0.32
CTDSP2-204ENST00000548823 NCMAPQ5T1S8 102 aa17.05■□□□□ 0.32
CTDSP2-204ENST00000548823 PNLDC1Q8NA58 520 aaKnown RBP17.05■□□□□ 0.32
CTDSP2-204ENST00000548823 OR6K3Q8NGY3 331 aa17.05■□□□□ 0.32
CTDSP2-204ENST00000548823 KCNG3Q8TAE7 436 aa17.05■□□□□ 0.32
CTDSP2-204ENST00000548823 NEUROG1Q92886 237 aa17.05■□□□□ 0.32
CTDSP2-204ENST00000548823 CPNE2Q96FN4 548 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms