RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 OR1L3Q8NH93 324 aa12.9□□□□□ -0.34
HOXC11-202ENST00000546378 SLC46A1Q96NT5 459 aa12.9□□□□□ -0.34
HOXC11-202ENST00000546378 PAPOLGQ9BWT3 736 aaKnown RBP12.9□□□□□ -0.34
HOXC11-202ENST00000546378 SMOC1Q9H4F8 434 aa12.9□□□□□ -0.34
HOXC11-202ENST00000546378 H0YL77 283 aa12.89□□□□□ -0.35
HOXC11-202ENST00000546378 LAMTOR5O43504 91 aa12.89□□□□□ -0.35
HOXC11-202ENST00000546378 OR2J2O76002 312 aa12.89□□□□□ -0.35
HOXC11-202ENST00000546378 OR2C1O95371 312 aa12.89□□□□□ -0.35
HOXC11-202ENST00000546378 MMP9P14780 707 aa12.89□□□□□ -0.35
HOXC11-202ENST00000546378 GSK3AP49840 483 aa12.89□□□□□ -0.35
HOXC11-202ENST00000546378 SUPT4H1P63272 117 aaKnown RBP12.89□□□□□ -0.35
HOXC11-202ENST00000546378 AQP3Q92482 292 aa12.89□□□□□ -0.35
HOXC11-202ENST00000546378 GNRHR2Q96P88 292 aa12.89□□□□□ -0.35
HOXC11-202ENST00000546378 B3GALT5Q9Y2C3 310 aa12.89□□□□□ -0.35
HOXC11-202ENST00000546378 SFT2D2O95562 160 aa12.89□□□□□ -0.35
HOXC11-202ENST00000546378 IGLV3-19P01714 112 aa12.89□□□□□ -0.35
HOXC11-202ENST00000546378 LCATP04180 440 aa12.89□□□□□ -0.35
HOXC11-202ENST00000546378 GNRHRP30968 328 aa12.89□□□□□ -0.35
HOXC11-202ENST00000546378 FGF8P55075 233 aaPredicted RBP12.89□□□□□ -0.35
HOXC11-202ENST00000546378 RSU1Q15404 277 aa12.89□□□□□ -0.35
HOXC11-202ENST00000546378 MST1LQ2TV78 715 aa12.89□□□□□ -0.35
HOXC11-202ENST00000546378 SOHLH1Q5JUK2 328 aa12.89□□□□□ -0.35
HOXC11-202ENST00000546378 STX12Q86Y82 276 aa12.89□□□□□ -0.35
HOXC11-202ENST00000546378 OR56B1Q8NGI3 324 aa12.89□□□□□ -0.35
HOXC11-202ENST00000546378 OR52M1Q8NGK5 317 aa12.89□□□□□ -0.35
HOXC11-202ENST00000546378 THOC3Q96J01 351 aaKnown RBP12.89□□□□□ -0.35
HOXC11-202ENST00000546378 MEGF10Q96KG7 1140 aa12.89□□□□□ -0.35
HOXC11-202ENST00000546378 LRFN5Q96NI6 719 aa12.89□□□□□ -0.35
HOXC11-202ENST00000546378 SERINC1Q9NRX5 453 aa12.89□□□□□ -0.35
HOXC11-202ENST00000546378 FGF21Q9NSA1 209 aa12.89□□□□□ -0.35
HOXC11-202ENST00000546378 RBM7Q9Y580 266 aaKnown RBP12.89□□□□□ -0.35
HOXC11-202ENST00000546378 A0A1W2PR77 199 aa12.89□□□□□ -0.35
HOXC11-202ENST00000546378 SSSCA1O60232 199 aa12.89□□□□□ -0.35
HOXC11-202ENST00000546378 CLN5O75503 358 aa12.89□□□□□ -0.35
HOXC11-202ENST00000546378 CNOT4O95628 575 aaKnown RBP12.89□□□□□ -0.35
HOXC11-202ENST00000546378 IFNA2P01563 188 aa12.89□□□□□ -0.35
HOXC11-202ENST00000546378 TAGLN2P37802 199 aaKnown RBP12.89□□□□□ -0.35
HOXC11-202ENST00000546378 POLR2GP62487 172 aaKnown RBP eCLIP12.89□□□□□ -0.35
HOXC11-202ENST00000546378 PIGYQ3MUY2 71 aa12.89□□□□□ -0.35
HOXC11-202ENST00000546378 GPR157Q5UAW9 335 aa12.89□□□□□ -0.35
HOXC11-202ENST00000546378 EIF5AL1Q6IS14 154 aaKnown RBP12.89□□□□□ -0.35
HOXC11-202ENST00000546378 RPUSD3Q6P087 351 aaKnown RBP12.89□□□□□ -0.35
HOXC11-202ENST00000546378 GRINAQ7Z429 371 aa12.89□□□□□ -0.35
HOXC11-202ENST00000546378 WDSUB1Q8N9V3 476 aa12.89□□□□□ -0.35
HOXC11-202ENST00000546378 SUMF2Q8NBJ7 301 aa12.89□□□□□ -0.35
HOXC11-202ENST00000546378 PLA2G2EQ9NZK7 142 aa12.89□□□□□ -0.35
HOXC11-202ENST00000546378 MCTS1Q9ULC4 181 aaKnown RBP12.89□□□□□ -0.35
HOXC11-202ENST00000546378 SCGNO76038 276 aa12.88□□□□□ -0.35
HOXC11-202ENST00000546378 HPNP05981 417 aa12.88□□□□□ -0.35
HOXC11-202ENST00000546378 HEXBP07686 556 aa12.88□□□□□ -0.35
HOXC11-202ENST00000546378 OR5H8P0DN80 308 aa12.88□□□□□ -0.35
HOXC11-202ENST00000546378 CD37P11049 281 aa12.88□□□□□ -0.35
HOXC11-202ENST00000546378 CSRP1P21291 193 aaKnown RBP12.88□□□□□ -0.35
HOXC11-202ENST00000546378 S100A2P29034 98 aa12.88□□□□□ -0.35
HOXC11-202ENST00000546378 CALCRP30988 508 aa12.88□□□□□ -0.35
HOXC11-202ENST00000546378 RPS18P62269 152 aaKnown RBP12.88□□□□□ -0.35
HOXC11-202ENST00000546378 CCL20P78556 96 aa12.88□□□□□ -0.35
HOXC11-202ENST00000546378 CYCSP99999 105 aaKnown RBP12.88□□□□□ -0.35
HOXC11-202ENST00000546378 PCK2Q16822 640 aa12.88□□□□□ -0.35
HOXC11-202ENST00000546378 PRSS54Q6PEW0 395 aa12.88□□□□□ -0.35
HOXC11-202ENST00000546378 OR10S1Q8NGN2 331 aa12.88□□□□□ -0.35
HOXC11-202ENST00000546378 IL1F10Q8WWZ1 152 aa12.88□□□□□ -0.35
HOXC11-202ENST00000546378 ZNF837Q96EG3 531 aaPredicted RBP12.88□□□□□ -0.35
HOXC11-202ENST00000546378 C2orf50Q96LR7 162 aa12.88□□□□□ -0.35
HOXC11-202ENST00000546378 MEMO1Q9Y316 297 aa12.88□□□□□ -0.35
HOXC11-202ENST00000546378 WIF1Q9Y5W5 379 aa12.88□□□□□ -0.35
HOXC11-202ENST00000546378 COLCA2A8K830 154 aa12.88□□□□□ -0.35
HOXC11-202ENST00000546378 ZNF705GA8MUZ8 300 aaPredicted RBP12.88□□□□□ -0.35
HOXC11-202ENST00000546378 PATE3B3GLJ2 98 aa12.88□□□□□ -0.35
HOXC11-202ENST00000546378 WRBO00258 174 aa12.88□□□□□ -0.35
HOXC11-202ENST00000546378 DDAH2O95865 285 aa12.88□□□□□ -0.35
HOXC11-202ENST00000546378 SULT1A1P50225 295 aa12.88□□□□□ -0.35
HOXC11-202ENST00000546378 RAB2AP61019 212 aa12.88□□□□□ -0.35
HOXC11-202ENST00000546378 LYSMD4Q5XG99 296 aa12.88□□□□□ -0.35
HOXC11-202ENST00000546378 LPCAT3Q6P1A2 487 aa12.88□□□□□ -0.35
HOXC11-202ENST00000546378 SLC22A25Q6T423 547 aa12.88□□□□□ -0.35
HOXC11-202ENST00000546378 KCNG3Q8TAE7 436 aa12.88□□□□□ -0.35
HOXC11-202ENST00000546378 TCTN2Q96GX1 697 aa12.88□□□□□ -0.35
HOXC11-202ENST00000546378 UCN2Q96RP3 112 aa12.88□□□□□ -0.35
HOXC11-202ENST00000546378 RTBDNQ9BSG5 229 aaPredicted RBP12.88□□□□□ -0.35
HOXC11-202ENST00000546378 AURKAIP1Q9NWT8 199 aaPredicted RBP12.88□□□□□ -0.35
HOXC11-202ENST00000546378 LIPGQ9Y5X9 500 aa12.88□□□□□ -0.35
HOXC11-202ENST00000546378 CYB5BO43169 146 aa12.87□□□□□ -0.35
HOXC11-202ENST00000546378 SCAF4O95104 1147 aaKnown RBP12.87□□□□□ -0.35
HOXC11-202ENST00000546378 FAM157CP0CG43 387 aa12.87□□□□□ -0.35
HOXC11-202ENST00000546378 LCN15Q6UWW0 184 aa12.87□□□□□ -0.35
HOXC11-202ENST00000546378 PIGCQ92535 297 aa12.87□□□□□ -0.35
HOXC11-202ENST00000546378 NAT6Q93015 286 aa12.87□□□□□ -0.35
HOXC11-202ENST00000546378 INTS12Q96CB8 462 aaKnown RBP12.87□□□□□ -0.35
HOXC11-202ENST00000546378 CRLF2Q9HC73 371 aa12.87□□□□□ -0.35
HOXC11-202ENST00000546378 SDHAF3Q9NRP4 125 aa12.87□□□□□ -0.35
HOXC11-202ENST00000546378 K7ESF4 209 aa12.87□□□□□ -0.35
HOXC11-202ENST00000546378 ZNF708P17019 499 aa12.87□□□□□ -0.35
HOXC11-202ENST00000546378 CAPZBP47756 277 aa12.87□□□□□ -0.35
HOXC11-202ENST00000546378 ZNF84P51523 738 aa12.87□□□□□ -0.35
HOXC11-202ENST00000546378 NXPH1P58417 271 aa12.87□□□□□ -0.35
HOXC11-202ENST00000546378 ZXDAP98168 799 aa12.87□□□□□ -0.35
HOXC11-202ENST00000546378 NKAIN1Q4KMZ8 207 aa12.87□□□□□ -0.35
HOXC11-202ENST00000546378 ZNF721Q8TF20 911 aa12.87□□□□□ -0.35
HOXC11-202ENST00000546378 GPX7Q96SL4 187 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms