RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 MRPL47Q9HD33 250 aaKnown RBP2.1□□□□□ -2.07
SNHG1-224ENST00000545688 TAC3Q9UHF0 121 aa2.1□□□□□ -2.07
SNHG1-224ENST00000545688 HOOK1Q9UJC3 728 aaKnown RBP2.1□□□□□ -2.07
SNHG1-224ENST00000545688 ZNF222Q9UK12 451 aa2.1□□□□□ -2.07
SNHG1-224ENST00000545688 MMACHCQ9Y4U1 282 aa2.1□□□□□ -2.07
SNHG1-224ENST00000545688 NCKAP5O14513 1909 aa2.1□□□□□ -2.07
SNHG1-224ENST00000545688 EML6Q6ZMW3 1958 aa2.1□□□□□ -2.07
SNHG1-224ENST00000545688 NINQ8N4C6 2090 aa2.1□□□□□ -2.07
SNHG1-224ENST00000545688 COL7A1Q02388 2944 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 STARD9Q9P2P6 4700 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 C15orf38-AP3S2A0A0A6YYH1 394 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 LOC100653049A0A140TA62 436 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 CTAGE15A4D2H0 777 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 DPRXA6NFQ7 191 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 OR51F1A6NGY5 319 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 ZNF860A6NHJ4 632 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 IQCF5A8MTL0 148 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 C4orf51C9J302 202 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 RPL36A-HNRNPH2H7BZ11 118 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 H7C417 338 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 UBFD1O14562 309 aaKnown RBP2.09□□□□□ -2.07
SNHG1-224ENST00000545688 RS1O15537 224 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 KRT34O76011 436 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 MYO1DO94832 1006 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 SNX4O95219 450 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 NPR2P20594 1047 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 RPS3P23396 243 aaKnown RBP eCLIP2.09□□□□□ -2.07
SNHG1-224ENST00000545688 MSNP26038 577 aaKnown RBP2.09□□□□□ -2.07
SNHG1-224ENST00000545688 HSD17B2P37059 387 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 COILP38432 576 aaPredicted RBP2.09□□□□□ -2.07
SNHG1-224ENST00000545688 CDKN2BP42772 138 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 CLDN18P56856 261 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 MEF2BQ02080 365 aaPredicted RBP2.09□□□□□ -2.07
SNHG1-224ENST00000545688 BCL2A1Q16548 175 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 HADHQ16836 314 aaKnown RBP2.09□□□□□ -2.07
SNHG1-224ENST00000545688 AFTPHQ6ULP2 937 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 SBSNQ6UWP8 590 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 HSDL2Q6YN16 418 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 CYHR1Q6ZMK1 362 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 TAS2R42Q7RTR8 314 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 PID1Q7Z2X4 250 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 CTAGE6Q86UF2 777 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 CA13Q8N1Q1 262 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 ZNF321PQ8N8H1 164 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 ZDHHC22Q8N966 263 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 MFSD9Q8NBP5 474 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 MORN4Q8NDC4 146 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 IPMKQ8NFU5 416 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 OR4K14Q8NGD5 310 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 NT5CQ8TCD5 201 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 BIRC8Q96P09 236 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 QKIQ96PU8 341 aaKnown RBP eCLIP2.09□□□□□ -2.07
SNHG1-224ENST00000545688 EBNA1BP2Q99848 306 aaKnown RBP2.09□□□□□ -2.07
SNHG1-224ENST00000545688 NXF5Q9H1B4 397 aaKnown RBP2.09□□□□□ -2.07
SNHG1-224ENST00000545688 HSD3B7Q9H2F3 369 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 HAUS4Q9H6D7 363 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 ANKHQ9HCJ1 492 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 ADAP2Q9NPF8 381 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 PTBP2Q9UKA9 531 aaKnown RBP2.09□□□□□ -2.07
SNHG1-224ENST00000545688 BOKQ9UMX3 212 aaPredicted RBP2.09□□□□□ -2.07
SNHG1-224ENST00000545688 MGAT4BQ9UQ53 548 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 C15orf41Q9Y2V0 281 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 HEY1Q9Y5J3 304 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 RFNGQ9Y644 331 aa2.09□□□□□ -2.07
SNHG1-224ENST00000545688 LYSTQ99698 3801 aa2.09□□□□□ -2.08
SNHG1-224ENST00000545688 SCN3AQ9NY46 2000 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 FRAS1Q86XX4 4008 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 PLAC8L1A1L4L8 177 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 HACD1B0YJ81 288 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 TRDCB7Z8K6 153 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 NDUFS8O00217 210 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 PRMT5O14744 637 aaPredicted RBP2.08□□□□□ -2.08
SNHG1-224ENST00000545688 CXCL13O43927 109 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 CTNSO60931 367 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 GCM2O75603 506 aaPredicted RBP2.08□□□□□ -2.08
SNHG1-224ENST00000545688 OR4F21O95013 312 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 ETHE1O95571 254 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 AIFM1O95831 613 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 CLPSP04118 112 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 TACSTD2P09758 323 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 IMPA1P29218 277 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 CALCRP30988 508 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 RPA3P35244 121 aaPredicted RBP2.08□□□□□ -2.08
SNHG1-224ENST00000545688 HPCAL1P37235 193 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 RCAN2Q14206 197 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 DEFB134Q4QY38 66 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 CTSL3PQ5NE16 218 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 PRAMEF20Q5VT98 475 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 CLEC2AQ6UVW9 174 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 SCIMPQ6UWF3 145 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 Q6ZN92 141 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 BZW1Q7L1Q6 419 aaKnown RBP2.08□□□□□ -2.08
SNHG1-224ENST00000545688 CDKL3Q8IVW4 592 aaPredicted RBP2.08□□□□□ -2.08
SNHG1-224ENST00000545688 KRT222Q8N1A0 295 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 DHRSXQ8N5I4 330 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 LINC00304Q8N9R0 145 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 SYT14Q8NB59 555 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 FAM83FQ8NEG4 500 aaPredicted RBP2.08□□□□□ -2.08
SNHG1-224ENST00000545688 OR52K1Q8NGK4 314 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 PEX13Q92968 403 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms