RNA–Protein interactions for RNA: ENST00000544349.5

VPS33A-209, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS33A, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-209ENST00000544349 DISC1C4P0D8 188 aa12.4□□□□□ -0.43
VPS33A-209ENST00000544349 B3GALNT1O75752 331 aa12.4□□□□□ -0.43
VPS33A-209ENST00000544349 KIR2DL2P43627 348 aaPredicted RBP12.4□□□□□ -0.43
VPS33A-209ENST00000544349 CXADRP78310 365 aa12.4□□□□□ -0.43
VPS33A-209ENST00000544349 PPP1R1AQ13522 171 aa12.4□□□□□ -0.43
VPS33A-209ENST00000544349 PLAC9Q5JTB6 97 aa12.4□□□□□ -0.43
VPS33A-209ENST00000544349 NSUN5P2Q63ZY6 315 aa12.4□□□□□ -0.43
VPS33A-209ENST00000544349 OR2A2Q6IF42 318 aa12.4□□□□□ -0.43
VPS33A-209ENST00000544349 CRIP3Q6Q6R5 217 aa12.4□□□□□ -0.43
VPS33A-209ENST00000544349 LRRC20Q8TCA0 184 aa12.4□□□□□ -0.43
VPS33A-209ENST00000544349 C1QTNF5Q9BXJ0 243 aa12.4□□□□□ -0.43
VPS33A-209ENST00000544349 SLC2A8Q9NY64 477 aa12.4□□□□□ -0.43
VPS33A-209ENST00000544349 DHRS7CA6NNS2 312 aa12.39□□□□□ -0.43
VPS33A-209ENST00000544349 TEX46H3BTG2 121 aa12.39□□□□□ -0.43
VPS33A-209ENST00000544349 SOCS1O15524 211 aa12.39□□□□□ -0.43
VPS33A-209ENST00000544349 MPIG6BO95866 241 aa12.39□□□□□ -0.43
VPS33A-209ENST00000544349 FAHP16930 419 aa12.39□□□□□ -0.43
VPS33A-209ENST00000544349 C4BPBP20851 252 aa12.39□□□□□ -0.43
VPS33A-209ENST00000544349 ZBTB25P24278 435 aa12.39□□□□□ -0.43
VPS33A-209ENST00000544349 CD34P28906 385 aa12.39□□□□□ -0.43
VPS33A-209ENST00000544349 CAPZA1P52907 286 aa12.39□□□□□ -0.43
VPS33A-209ENST00000544349 MEF2DQ14814 521 aa12.39□□□□□ -0.43
VPS33A-209ENST00000544349 HIKESHIQ53FT3 197 aa12.39□□□□□ -0.43
VPS33A-209ENST00000544349 TMEM65Q6PI78 240 aa12.39□□□□□ -0.43
VPS33A-209ENST00000544349 GSG1LQ6UXU4 331 aa12.39□□□□□ -0.43
VPS33A-209ENST00000544349 COLCA1Q6ZS62 124 aa12.39□□□□□ -0.43
VPS33A-209ENST00000544349 DPPA2Q7Z7J5 298 aa12.39□□□□□ -0.43
VPS33A-209ENST00000544349 CNEP1R1Q8N9A8 125 aa12.39□□□□□ -0.43
VPS33A-209ENST00000544349 ADAD2Q8NCV1 583 aaKnown RBP12.39□□□□□ -0.43
VPS33A-209ENST00000544349 COQ8AQ8NI60 647 aa12.39□□□□□ -0.43
VPS33A-209ENST00000544349 PP6455Q8WZ26 134 aa12.39□□□□□ -0.43
VPS33A-209ENST00000544349 ST8SIA4Q92187 359 aa12.39□□□□□ -0.43
VPS33A-209ENST00000544349 CCDC120Q96HB5 630 aa12.39□□□□□ -0.43
VPS33A-209ENST00000544349 REG4Q9BYZ8 158 aa12.39□□□□□ -0.43
VPS33A-209ENST00000544349 KIF25Q9UIL4 384 aa12.39□□□□□ -0.43
VPS33A-209ENST00000544349 ZNF391Q9UJN7 358 aa12.39□□□□□ -0.43
VPS33A-209ENST00000544349 NOP16Q9Y3C1 178 aaKnown RBP12.39□□□□□ -0.43
VPS33A-209ENST00000544349 hCG_1807616A0A1W2PRN6 198 aa12.38□□□□□ -0.43
VPS33A-209ENST00000544349 ZSCAN5BA6NJL1 495 aa12.38□□□□□ -0.43
VPS33A-209ENST00000544349 RFPL4AA6NLU0 287 aa12.38□□□□□ -0.43
VPS33A-209ENST00000544349 RFPL4AL1F8VTS6 287 aa12.38□□□□□ -0.43
VPS33A-209ENST00000544349 CDC14BO60729 498 aa12.38□□□□□ -0.43
VPS33A-209ENST00000544349 RAD51DO75771 328 aa12.38□□□□□ -0.43
VPS33A-209ENST00000544349 PMP2P02689 132 aa12.38□□□□□ -0.43
VPS33A-209ENST00000544349 RPA2P15927 270 aa12.38□□□□□ -0.43
VPS33A-209ENST00000544349 IGHV1-2P23083 117 aa12.38□□□□□ -0.43
VPS33A-209ENST00000544349 SIGIRRQ6IA17 410 aa12.38□□□□□ -0.43
VPS33A-209ENST00000544349 SEMA6DQ8NFY4 1073 aa12.38□□□□□ -0.43
VPS33A-209ENST00000544349 OR6K3Q8NGY3 331 aa12.38□□□□□ -0.43
VPS33A-209ENST00000544349 SSC4DQ8WTU2 575 aa12.38□□□□□ -0.43
VPS33A-209ENST00000544349 NPRL2Q8WTW4 380 aa12.38□□□□□ -0.43
VPS33A-209ENST00000544349 PRRT1Q99946 306 aa12.38□□□□□ -0.43
VPS33A-209ENST00000544349 CHST5Q9GZS9 411 aa12.38□□□□□ -0.43
VPS33A-209ENST00000544349 RGCCQ9H4X1 137 aa12.38□□□□□ -0.43
VPS33A-209ENST00000544349 IFT46Q9NQC8 304 aa12.38□□□□□ -0.43
VPS33A-209ENST00000544349 FBLN5Q9UBX5 448 aa12.38□□□□□ -0.43
VPS33A-209ENST00000544349 ACACAQ13085 2346 aa12.38□□□□□ -0.43
VPS33A-209ENST00000544349 TUBAL3A6NHL2 446 aa12.38□□□□□ -0.43
VPS33A-209ENST00000544349 CNOT4O95628 575 aaKnown RBP12.38□□□□□ -0.43
VPS33A-209ENST00000544349 HCKP08631 526 aa12.38□□□□□ -0.43
VPS33A-209ENST00000544349 EDN3P14138 238 aa12.38□□□□□ -0.43
VPS33A-209ENST00000544349 PRF1P14222 555 aa12.38□□□□□ -0.43
VPS33A-209ENST00000544349 ACKR3P25106 362 aa12.38□□□□□ -0.43
VPS33A-209ENST00000544349 PLP2Q04941 152 aa12.38□□□□□ -0.43
VPS33A-209ENST00000544349 GK2Q14410 553 aaPredicted RBP12.38□□□□□ -0.43
VPS33A-209ENST00000544349 UBE2V2Q15819 145 aa12.38□□□□□ -0.43
VPS33A-209ENST00000544349 KRTCAP3Q53RY4 240 aa12.38□□□□□ -0.43
VPS33A-209ENST00000544349 ZNF660Q6AZW8 331 aaPredicted RBP12.38□□□□□ -0.43
VPS33A-209ENST00000544349 VWA1Q6PCB0 445 aa12.38□□□□□ -0.43
VPS33A-209ENST00000544349 FAM180AQ6UWF9 173 aa12.38□□□□□ -0.43
VPS33A-209ENST00000544349 Q6ZT83 130 aa12.38□□□□□ -0.43
VPS33A-209ENST00000544349 SLC25A42Q86VD7 318 aa12.38□□□□□ -0.43
VPS33A-209ENST00000544349 OR5D18Q8NGL1 313 aa12.38□□□□□ -0.43
VPS33A-209ENST00000544349 NANOS1Q8WY41 292 aaKnown RBP12.38□□□□□ -0.43
VPS33A-209ENST00000544349 RBPMSQ93062 196 aaKnown RBP12.38□□□□□ -0.43
VPS33A-209ENST00000544349 MFFQ9GZY8 342 aa12.38□□□□□ -0.43
VPS33A-209ENST00000544349 RDH8Q9NYR8 311 aa12.38□□□□□ -0.43
VPS33A-209ENST00000544349 MBD3L4A6NDZ8 208 aaPredicted RBP12.37□□□□□ -0.43
VPS33A-209ENST00000544349 MBD3L3A6NE82 208 aaPredicted RBP12.37□□□□□ -0.43
VPS33A-209ENST00000544349 MBD3L5A6NJ08 208 aaPredicted RBP12.37□□□□□ -0.43
VPS33A-209ENST00000544349 XRCC2O43543 280 aa12.37□□□□□ -0.43
VPS33A-209ENST00000544349 SPDEFO95238 335 aa12.37□□□□□ -0.43
VPS33A-209ENST00000544349 CD8AP01732 235 aa12.37□□□□□ -0.43
VPS33A-209ENST00000544349 CCL2P13500 99 aa12.37□□□□□ -0.43
VPS33A-209ENST00000544349 CCNOP22674 350 aa12.37□□□□□ -0.43
VPS33A-209ENST00000544349 MPZP25189 248 aa12.37□□□□□ -0.43
VPS33A-209ENST00000544349 TMPRSS3P57727 454 aa12.37□□□□□ -0.43
VPS33A-209ENST00000544349 TGFBR3Q03167 851 aa12.37□□□□□ -0.43
VPS33A-209ENST00000544349 ZNF92Q03936 586 aa12.37□□□□□ -0.43
VPS33A-209ENST00000544349 FOXF2Q12947 444 aa12.37□□□□□ -0.43
VPS33A-209ENST00000544349 LRRC37A5PQ49AS3 106 aa12.37□□□□□ -0.43
VPS33A-209ENST00000544349 SEM1Q6ZVN7 128 aa12.37□□□□□ -0.43
VPS33A-209ENST00000544349 LYG2Q86SG7 212 aa12.37□□□□□ -0.43
VPS33A-209ENST00000544349 MBD3L2Q8NHZ7 208 aaPredicted RBP12.37□□□□□ -0.43
VPS33A-209ENST00000544349 SUN5Q8TC36 379 aa12.37□□□□□ -0.43
VPS33A-209ENST00000544349 SCARB1Q8WTV0 552 aa12.37□□□□□ -0.43
VPS33A-209ENST00000544349 C17orf50Q8WW18 174 aa12.37□□□□□ -0.43
VPS33A-209ENST00000544349 POM121L2Q96KW2 1035 aa12.37□□□□□ -0.43
VPS33A-209ENST00000544349 hCG_38984A0A1B0GV85 526 aa12.37□□□□□ -0.43
VPS33A-209ENST00000544349 C5orf49A4QMS7 147 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms