RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 CDC14BO60729 498 aa13.82□□□□□ -0.2
CHD4-210ENST00000544040 CA6P23280 308 aa13.82□□□□□ -0.2
CHD4-210ENST00000544040 ISOC2Q96AB3 205 aa13.82□□□□□ -0.2
CHD4-210ENST00000544040 HMGA1P17096 107 aaKnown RBP13.82□□□□□ -0.2
CHD4-210ENST00000544040 RPS4XP62701 263 aaKnown RBP13.82□□□□□ -0.2
CHD4-210ENST00000544040 LSM11P83369 360 aaKnown RBP eCLIP13.82□□□□□ -0.21e-6■□□□□ 9.8
CHD4-210ENST00000544040 RSPO2Q6UXX9 243 aaPredicted RBP13.82□□□□□ -0.2
CHD4-210ENST00000544040 MYEOVQ96EZ4 313 aa13.82□□□□□ -0.2
CHD4-210ENST00000544040 NWD2Q9ULI1 1742 aa13.82□□□□□ -0.2
CHD4-210ENST00000544040 NGFP01138 241 aa13.82□□□□□ -0.2
CHD4-210ENST00000544040 DHRS2Q13268 280 aa13.82□□□□□ -0.2
CHD4-210ENST00000544040 RASL12Q9NYN1 266 aa13.82□□□□□ -0.2
CHD4-210ENST00000544040 LYZP61626 148 aa13.82□□□□□ -0.2
CHD4-210ENST00000544040 OR10G4Q8NGN3 311 aa13.82□□□□□ -0.2
CHD4-210ENST00000544040 OR10G9Q8NGN4 311 aa13.82□□□□□ -0.2
CHD4-210ENST00000544040 OR10G7Q8NGN6 311 aa13.82□□□□□ -0.2
CHD4-210ENST00000544040 OR1B1Q8NGR6 318 aa13.82□□□□□ -0.2
CHD4-210ENST00000544040 TMEM56Q96MV1 263 aa13.82□□□□□ -0.2
CHD4-210ENST00000544040 LPAR5Q9H1C0 372 aa13.82□□□□□ -0.2
CHD4-210ENST00000544040 CYSLTR2Q9NS75 346 aa13.82□□□□□ -0.2
CHD4-210ENST00000544040 CACNG5Q9UF02 275 aa13.82□□□□□ -0.2
CHD4-210ENST00000544040 PNLIPRP2P54317 469 aa13.82□□□□□ -0.2
CHD4-210ENST00000544040 INPP5JQ15735 1006 aaPredicted RBP13.82□□□□□ -0.2
CHD4-210ENST00000544040 NEURL2Q9BR09 285 aa13.82□□□□□ -0.2
CHD4-210ENST00000544040 OR2D2Q9H210 308 aa13.82□□□□□ -0.2
CHD4-210ENST00000544040 LINC01553A4QN01 128 aa13.81□□□□□ -0.2
CHD4-210ENST00000544040 CCL2P13500 99 aa13.81□□□□□ -0.2
CHD4-210ENST00000544040 MEOX2P50222 304 aa13.81□□□□□ -0.2
CHD4-210ENST00000544040 TMEM215Q68D42 235 aa13.81□□□□□ -0.2
CHD4-210ENST00000544040 FDX2Q6P4F2 183 aa13.81□□□□□ -0.2
CHD4-210ENST00000544040 TMEM116Q8NCL8 245 aa13.81□□□□□ -0.2
CHD4-210ENST00000544040 OR10C1Q96KK4 312 aa13.81□□□□□ -0.2
CHD4-210ENST00000544040 ASB16Q96NS5 453 aa13.81□□□□□ -0.2
CHD4-210ENST00000544040 TMEM140Q9NV12 185 aa13.81□□□□□ -0.2
CHD4-210ENST00000544040 OR5AC1P0C628 307 aa13.81□□□□□ -0.2
CHD4-210ENST00000544040 DAOP14920 347 aa13.81□□□□□ -0.2
CHD4-210ENST00000544040 DPTQ07507 201 aa13.81□□□□□ -0.2
CHD4-210ENST00000544040 SLC6A13Q9NSD5 602 aa13.81□□□□□ -0.2
CHD4-210ENST00000544040 CAPZBP47756 277 aa13.81□□□□□ -0.2
CHD4-210ENST00000544040 KISS1Q15726 138 aa13.81□□□□□ -0.2
CHD4-210ENST00000544040 ZNF683Q8IZ20 524 aa13.81□□□□□ -0.2
CHD4-210ENST00000544040 LINC00052Q96N35 136 aa13.81□□□□□ -0.2
CHD4-210ENST00000544040 PDFQ9HBH1 243 aa13.81□□□□□ -0.2
CHD4-210ENST00000544040 HELTA6NFD8 242 aa13.81□□□□□ -0.2
CHD4-210ENST00000544040 SP1P08047 785 aa13.81□□□□□ -0.2
CHD4-210ENST00000544040 PRSS12P56730 875 aa13.81□□□□□ -0.2
CHD4-210ENST00000544040 ARRDC1Q8N5I2 433 aa13.81□□□□□ -0.2
CHD4-210ENST00000544040 ANKLE1Q8NAG6 615 aa13.81□□□□□ -0.2
CHD4-210ENST00000544040 APOBEC3DQ96AK3 386 aaPredicted RBP13.81□□□□□ -0.2
CHD4-210ENST00000544040 SIRT5Q9NXA8 310 aa13.81□□□□□ -0.2
CHD4-210ENST00000544040 LRP6O75581 1613 aa13.81□□□□□ -0.2
CHD4-210ENST00000544040 ZDHHC22Q8N966 263 aa13.81□□□□□ -0.2
CHD4-210ENST00000544040 HIST1H1DP16402 221 aaKnown RBP13.81□□□□□ -0.2
CHD4-210ENST00000544040 GSG1Q2KHT4 349 aa13.81□□□□□ -0.2
CHD4-210ENST00000544040 WIPI1Q5MNZ9 446 aaPredicted RBP13.81□□□□□ -0.2
CHD4-210ENST00000544040 OR5A2Q8NGI9 324 aa13.81□□□□□ -0.2
CHD4-210ENST00000544040 PLA2G3Q9NZ20 509 aa13.81□□□□□ -0.2
CHD4-210ENST00000544040 IL17BQ9UHF5 180 aa13.81□□□□□ -0.2
CHD4-210ENST00000544040 A0A087X0M5 115 aa13.8□□□□□ -0.2
CHD4-210ENST00000544040 A0A1B0GX30 115 aa13.8□□□□□ -0.2
CHD4-210ENST00000544040 SERTM1A2A2V5 107 aa13.8□□□□□ -0.2
CHD4-210ENST00000544040 DNASE2O00115 360 aaPredicted RBP13.8□□□□□ -0.2
CHD4-210ENST00000544040 ST8SIA5O15466 376 aa13.8□□□□□ -0.2
CHD4-210ENST00000544040 ACTL6AO96019 429 aa13.8□□□□□ -0.2
CHD4-210ENST00000544040 DYNLT3P51808 116 aa13.8□□□□□ -0.2
CHD4-210ENST00000544040 NKG7Q16617 165 aa13.8□□□□□ -0.2
CHD4-210ENST00000544040 GVQW1Q8N7I0 195 aa13.8□□□□□ -0.2
CHD4-210ENST00000544040 ELSPBP1Q96BH3 223 aa13.8□□□□□ -0.2
CHD4-210ENST00000544040 TAAR3PQ9P1P4 343 aa13.8□□□□□ -0.2
CHD4-210ENST00000544040 RER1O15258 196 aa13.8□□□□□ -0.2
CHD4-210ENST00000544040 ATP5SQ99766 215 aa13.8□□□□□ -0.2
CHD4-210ENST00000544040 IER2Q9BTL4 223 aa13.8□□□□□ -0.2
CHD4-210ENST00000544040 SLIRPQ9GZT3 109 aaKnown RBP13.8□□□□□ -0.2
CHD4-210ENST00000544040 SLC45A2Q9UMX9 530 aa13.8□□□□□ -0.2
CHD4-210ENST00000544040 HTN1P15515 57 aa13.8□□□□□ -0.2
CHD4-210ENST00000544040 SLC6A1P30531 599 aa13.8□□□□□ -0.2
CHD4-210ENST00000544040 ZNF83P51522 516 aa13.8□□□□□ -0.2
CHD4-210ENST00000544040 ACVR1Q04771 509 aa13.8□□□□□ -0.2
CHD4-210ENST00000544040 TRAT1Q6PIZ9 186 aa13.8□□□□□ -0.2
CHD4-210ENST00000544040 TMEM9BQ9NQ34 198 aa13.8□□□□□ -0.2
CHD4-210ENST00000544040 A0A0A6YYD5 115 aa13.8□□□□□ -0.2
CHD4-210ENST00000544040 FIGNL2A6NMB9 653 aa13.8□□□□□ -0.2
CHD4-210ENST00000544040 KLK8O60259 260 aa13.8□□□□□ -0.2
CHD4-210ENST00000544040 COX7A1P24310 79 aa13.8□□□□□ -0.2
CHD4-210ENST00000544040 SCGB1D4Q6XE38 83 aa13.8□□□□□ -0.2
CHD4-210ENST00000544040 LILRB1Q8NHL6 650 aaPredicted RBP13.8□□□□□ -0.2
CHD4-210ENST00000544040 GPX7Q96SL4 187 aaPredicted RBP13.8□□□□□ -0.2
CHD4-210ENST00000544040 FBXL17Q9UF56 701 aa13.8□□□□□ -0.2
CHD4-210ENST00000544040 ADAM11O75078 769 aa13.8□□□□□ -0.2
CHD4-210ENST00000544040 CRYBB2P43320 205 aa13.8□□□□□ -0.2
CHD4-210ENST00000544040 TMED3Q9Y3Q3 217 aa13.8□□□□□ -0.2
CHD4-210ENST00000544040 LIPGQ9Y5X9 500 aa13.8□□□□□ -0.2
CHD4-210ENST00000544040 RGS13O14921 159 aa13.79□□□□□ -0.2
CHD4-210ENST00000544040 SBK3P0C264 359 aa13.79□□□□□ -0.2
CHD4-210ENST00000544040 C12orf73Q69YU5 71 aa13.79□□□□□ -0.2
CHD4-210ENST00000544040 TMEM174Q8WUU8 243 aa13.79□□□□□ -0.2
CHD4-210ENST00000544040 TMEM208Q9BTX3 173 aa13.79□□□□□ -0.2
CHD4-210ENST00000544040 TCRBV16S1A1N1A0A5B0 115 aa13.79□□□□□ -0.2
CHD4-210ENST00000544040 ALG1L2C9J202 215 aa13.79□□□□□ -0.2
CHD4-210ENST00000544040 MPC2O95563 127 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms