RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 RBKSQ9H477 322 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 TBC1D17Q9HA65 648 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 ELL3Q9HB65 397 aaPredicted RBP5.09□□□□□ -1.59
XRCC4-206ENST00000542685 CDH20Q9HBT6 801 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 OBP2BQ9NPH6 170 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 LIN7CQ9NUP9 197 aaKnown RBP5.09□□□□□ -1.59
XRCC4-206ENST00000542685 TMEM30AQ9NV96 361 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 MRPL27Q9P0M9 148 aaKnown RBP5.09□□□□□ -1.59
XRCC4-206ENST00000542685 GALPQ9UBC7 116 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 YARS2Q9Y2Z4 477 aaKnown RBP5.09□□□□□ -1.59
XRCC4-206ENST00000542685 AMDHD2Q9Y303 409 aa5.09□□□□□ -1.59
XRCC4-206ENST00000542685 RBM7Q9Y580 266 aaKnown RBP5.09□□□□□ -1.59
XRCC4-206ENST00000542685 A0A0B4J2A0 478 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 CXorf51AA0A1B0GTR3 108 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 A0A1W2PPE2 198 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 MYBPHLA2RUH7 354 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 FAM90A18PA6NE21 464 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 FAM90A16PA6NEW6 464 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 TLCD2A6NGC4 264 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 OR51F1A6NGY5 319 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 FAM90A9PA6NNJ1 464 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 DHRS7CA6NNS2 312 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 ZNF705GA8MUZ8 300 aaPredicted RBP5.08□□□□□ -1.6
XRCC4-206ENST00000542685 FAM90A5PA8MXJ8 464 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 MANBAO00462 879 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 SMAD9O15198 467 aaKnown RBP5.08□□□□□ -1.6
XRCC4-206ENST00000542685 ZNF208O43345 1280 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 CST4P01036 141 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 SLC35G6P0C7Q6 338 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 FAM90A15PP0C7V4 464 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 FAM90A14PP0C7W9 464 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 FGF5P12034 268 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 MMP11P24347 488 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 CD34P28906 385 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 IMPA1P29218 277 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 TLX1P31314 330 aaPredicted RBP5.08□□□□□ -1.6
XRCC4-206ENST00000542685 TAGLN2P37802 199 aaKnown RBP5.08□□□□□ -1.6
XRCC4-206ENST00000542685 OR3A2P47893 321 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 RPL29P47914 159 aaKnown RBP5.08□□□□□ -1.6
XRCC4-206ENST00000542685 GLIPR1P48060 266 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 POLR2HP52434 150 aaKnown RBP5.08□□□□□ -1.6
XRCC4-206ENST00000542685 EMP2P54851 167 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 TMEM33P57088 247 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 UBE2MP61081 183 aaKnown RBP5.08□□□□□ -1.6
XRCC4-206ENST00000542685 ERVS71-1P61550 626 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 FAM3AP98173 230 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 IHHQ14623 411 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 SLC17A1Q14916 467 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 PRSS8Q16651 343 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 ODF4Q2M2E3 257 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 DUSP28Q4G0W2 176 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 HIKESHIQ53FT3 197 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 DCST1Q5T197 706 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 OR2G6Q5TZ20 316 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 LYPLAL1Q5VWZ2 237 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 RGMBQ6NW40 437 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 PAQR6Q6TCH4 344 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 LCTLQ6UWM7 567 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 CLEC18BQ6UXF7 455 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 ZNF705AQ6ZN79 300 aaPredicted RBP5.08□□□□□ -1.6
XRCC4-206ENST00000542685 TEX43Q6ZNM6 134 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 Q6ZSV7 163 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 TSEN54Q7Z6J9 526 aaKnown RBP5.08□□□□□ -1.6
XRCC4-206ENST00000542685 GBGT1Q8N5D6 347 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 FRMD1Q8N878 549 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 NOXO1Q8NFA2 376 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 SLC26A10Q8NG04 563 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 OR4B1Q8NGF8 309 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 OR4D5Q8NGN0 318 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 OR10G4Q8NGN3 311 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 OR13C4Q8NGS5 318 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 OR52I2Q8NH67 350 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 OR4S2Q8NH73 311 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 TSEN15Q8WW01 171 aaKnown RBP5.08□□□□□ -1.6
XRCC4-206ENST00000542685 CPNE2Q96FN4 548 aaPredicted RBP5.08□□□□□ -1.6
XRCC4-206ENST00000542685 JSRP1Q96MG2 331 aaPredicted RBP5.08□□□□□ -1.6
XRCC4-206ENST00000542685 IP6K3Q96PC2 410 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 ZBP1Q9H171 429 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 POLR2J3Q9H1A7 115 aaKnown RBP5.08□□□□□ -1.6
XRCC4-206ENST00000542685 CXCL16Q9H2A7 254 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 C6orf106Q9H6K1 298 aaPredicted RBP5.08□□□□□ -1.6
XRCC4-206ENST00000542685 TMEM231Q9H6L2 316 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 AUNIPQ9H7T9 357 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 BEX1Q9HBH7 125 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 SLC17A5Q9NRA2 495 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 CYTL1Q9NRR1 136 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 CNIH4Q9P003 139 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 B3GAT1Q9P2W7 334 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 MTFP1Q9UDX5 166 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 SHPKQ9UHJ6 478 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 SCML2Q9UQR0 700 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 SLC22A13Q9Y226 551 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 FARSAQ9Y285 508 aaKnown RBP5.08□□□□□ -1.6
XRCC4-206ENST00000542685 ARL5AQ9Y689 179 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 THSD7BQ9C0I4 1608 aa5.08□□□□□ -1.6
XRCC4-206ENST00000542685 PLXNB3Q9ULL4 1909 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 LOC105371242A0A075B767 164 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 KCNE1BA0A087WTH5 132 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 IGHV2OR16-5A0A0B4J2B6 119 aa5.07□□□□□ -1.6
XRCC4-206ENST00000542685 TRBV5-4A0A0C4DH59 114 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms