RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 STK16O75716 305 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 ZNF189O75820 626 aaPredicted RBP1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 SERPINI2O75830 405 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 CSTAP01040 98 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 RBP4P02753 201 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 ALDOCP09972 364 aaKnown RBP1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 TFPTP0C1Z6 253 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 FAM90A15PP0C7V4 464 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 FAM90A14PP0C7W9 464 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 UBTFL6P0CB48 400 aaPredicted RBP1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 SPART-AS1P0CW21 52 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 CCL3L1P16619 93 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 IMPDH1P20839 514 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 SYT1P21579 422 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 CXCR1P25024 350 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 ACKR3P25106 362 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 CD40LGP29965 261 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 FMO3P31513 532 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 SOX6P35712 828 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 NAA10P41227 235 aaPredicted RBP1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 MAP3K8P41279 467 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 GPR4P46093 362 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 AMTP48728 403 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 CSNK1A1P48729 337 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 IDH2P48735 452 aaKnown RBP1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 ERFP50548 548 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 NCBP2P52298 156 aaKnown RBP eCLIP1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 CAPZA1P52907 286 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 KRTAP10-12P60413 245 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 CNBPP62633 177 aaKnown RBP1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 CBX1P83916 185 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 PSG4Q00888 419 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 MZT1Q08AG7 82 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 OR8G1Q15617 311 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 PCK2Q16822 640 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 C18orf21Q32NC0 220 aaPredicted RBP1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 RFX4Q33E94 735 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 DDX59Q5T1V6 619 aaKnown RBP eCLIP1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 CCNJQ5T5M9 372 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 LIPKQ5VXJ0 399 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 STUMQ69YW2 141 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 ANKRD26P1Q6NSI1 321 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 CD200R1LQ6Q8B3 271 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 REG3GQ6UW15 175 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 FBXW12Q6X9E4 464 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 ZNF826PQ6ZT77 177 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 EIF3MQ7L2H7 374 aaKnown RBP1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 GDPD3Q7L5L3 318 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 NUDCD3Q8IVD9 361 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 ARHGAP24Q8N264 748 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 TCAIMQ8N3R3 496 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 OR2C3Q8N628 320 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 TCTEX1D1Q8N7M0 179 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 BHLHE23Q8NDY6 225 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 TMEM185AQ8NFB2 350 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 AKR7LQ8NHP1 331 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 ZNF596Q8TC21 504 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 GRK7Q8WTQ7 553 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 NELFBQ8WX92 580 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 SGK3Q96BR1 496 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 SLC25A36Q96CQ1 311 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 HAUS1Q96CS2 278 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 RASD2Q96D21 266 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 NMD3Q96D46 503 aaKnown RBP1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 PDLIM5Q96HC4 596 aaKnown RBP1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 RSRC1Q96IZ7 334 aaKnown RBP1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 BPIFA3Q9BQP9 254 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 KIFC1Q9BW19 673 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 CLEC7AQ9BXN2 247 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 CHST5Q9GZS9 411 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 SLC25A32Q9H2D1 315 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 PPIL3Q9H2H8 161 aaKnown RBP1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 TXNIPQ9H3M7 391 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 ELL3Q9HB65 397 aaPredicted RBP1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 PNRC2Q9NPJ4 139 aaKnown RBP1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 MIEF1Q9NQG6 463 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 HAO2Q9NYQ3 351 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 BFARQ9NZS9 450 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 CELA1Q9UNI1 258 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 COPS3Q9UNS2 423 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 ERGIC3Q9Y282 383 aa1.41□□□□□ -2.18
TRAV1-1-201ENST00000542354 SAA2-SAA4A0A096LPE2 208 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 IGHV2-26A0A0B4J1V2 119 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 TRAV26-2A0A0B4J265 109 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 TRAV41A0A0B4J266 112 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 A0A0D9SG52 128 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 A0A1B0GVL5 298 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 TRAPPC13A5PLN9 417 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 OR6C68A6NDL8 312 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 ARRDC5A6NEK1 342 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 A8MVM7 634 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 G3V318 75 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 AP3B1O00203 1094 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 PRYO14603 147 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 LSM1O15116 133 aaKnown RBP1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 GMDSO60547 372 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 ADAP1O75689 374 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 GATBO75879 557 aaKnown RBP1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 PROSCO94903 275 aa1.4□□□□□ -2.19
TRAV1-1-201ENST00000542354 CA1P00915 261 aaPredicted RBP1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms