RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 RPL35P42766 123 aaKnown RBP11.92□□□□□ -0.5
BNIP3-202ENST00000540159 HTR5AP47898 357 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 NPBWR1P48145 328 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 SSR4P51571 173 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 IGFBP7Q16270 282 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 HAGHLQ6PII5 290 aaPredicted RBP11.92□□□□□ -0.5
BNIP3-202ENST00000540159 VASH2Q86V25 355 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 LDLRAD3Q86YD5 345 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 SULF2Q8IWU5 870 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 ARRDC1Q8N5I2 433 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 ZIC4Q8N9L1 334 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 OR5T2Q8NGG2 359 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 PIGCQ92535 297 aa11.92□□□□□ -0.5
BNIP3-202ENST00000540159 LIFP15018 202 aa11.91□□□□□ -0.5
BNIP3-202ENST00000540159 FPR2P25090 351 aa11.91□□□□□ -0.5
BNIP3-202ENST00000540159 TAS2R31P59538 309 aa11.91□□□□□ -0.5
BNIP3-202ENST00000540159 HIST3H3Q16695 136 aa11.91□□□□□ -0.5
BNIP3-202ENST00000540159 SLC25A53Q5H9E4 307 aa11.91□□□□□ -0.5
BNIP3-202ENST00000540159 TCEAL6Q6IPX3 200 aa11.91□□□□□ -0.5
BNIP3-202ENST00000540159 MEX3BQ6ZN04 569 aaKnown RBP11.91□□□□□ -0.5
BNIP3-202ENST00000540159 MAML2Q8IZL2 1156 aaPredicted RBP11.91□□□□□ -0.5
BNIP3-202ENST00000540159 FADS6Q8N9I5 356 aa11.91□□□□□ -0.5
BNIP3-202ENST00000540159 SUMF1Q8NBK3 374 aa11.91□□□□□ -0.5
BNIP3-202ENST00000540159 TCEAL3Q969E4 200 aa11.91□□□□□ -0.5
BNIP3-202ENST00000540159 DUSP23Q9BVJ7 150 aa11.91□□□□□ -0.5
BNIP3-202ENST00000540159 ZNF107Q9UII5 783 aaPredicted RBP11.91□□□□□ -0.5
BNIP3-202ENST00000540159 AK3Q9UIJ7 227 aa11.91□□□□□ -0.5
BNIP3-202ENST00000540159 RFNGQ9Y644 331 aa11.91□□□□□ -0.5
BNIP3-202ENST00000540159 TTC28Q96AY4 2481 aa11.91□□□□□ -0.5
BNIP3-202ENST00000540159 IGHV3-64DA0A0J9YX35 117 aa11.91□□□□□ -0.5
BNIP3-202ENST00000540159 C1QL1O75973 258 aa11.91□□□□□ -0.5
BNIP3-202ENST00000540159 OR5H8P0DN80 308 aa11.91□□□□□ -0.5
BNIP3-202ENST00000540159 DUSP1P28562 367 aa11.91□□□□□ -0.5
BNIP3-202ENST00000540159 EIF1P41567 113 aaKnown RBP11.91□□□□□ -0.5
BNIP3-202ENST00000540159 FHITP49789 147 aa11.91□□□□□ -0.5
BNIP3-202ENST00000540159 SULT4A1Q9BR01 284 aa11.91□□□□□ -0.5
BNIP3-202ENST00000540159 P4HTMQ9NXG6 502 aa11.91□□□□□ -0.5
BNIP3-202ENST00000540159 ZNF629Q9UEG4 869 aaPredicted RBP11.91□□□□□ -0.5
BNIP3-202ENST00000540159 OSGIN2Q9Y236 505 aa11.91□□□□□ -0.5
BNIP3-202ENST00000540159 SPTBN2O15020 2390 aa11.9□□□□□ -0.5
BNIP3-202ENST00000540159 CPT2P23786 658 aa11.9□□□□□ -0.5
BNIP3-202ENST00000540159 PIGPP57054 158 aa11.9□□□□□ -0.5
BNIP3-202ENST00000540159 VAX1Q5SQQ9 334 aa11.9□□□□□ -0.5
BNIP3-202ENST00000540159 FBXL14Q8N1E6 418 aa11.9□□□□□ -0.5
BNIP3-202ENST00000540159 SLC25A43Q8WUT9 341 aaPredicted RBP11.9□□□□□ -0.5
BNIP3-202ENST00000540159 OCSTAMPQ9BR26 566 aa11.9□□□□□ -0.5
BNIP3-202ENST00000540159 CHST5Q9GZS9 411 aa11.9□□□□□ -0.5
BNIP3-202ENST00000540159 PIGMQ9H3S5 423 aa11.9□□□□□ -0.5
BNIP3-202ENST00000540159 DKK1O94907 266 aa11.9□□□□□ -0.5
BNIP3-202ENST00000540159 RPS2P15880 293 aaKnown RBP11.9□□□□□ -0.5
BNIP3-202ENST00000540159 CD80P33681 288 aa11.9□□□□□ -0.5
BNIP3-202ENST00000540159 LPAR6P43657 344 aa11.9□□□□□ -0.5
BNIP3-202ENST00000540159 SUCLG1P53597 346 aaKnown RBP11.9□□□□□ -0.5
BNIP3-202ENST00000540159 H3F3AP84243 136 aa11.9□□□□□ -0.5
BNIP3-202ENST00000540159 CMSS1Q9BQ75 279 aaKnown RBP11.9□□□□□ -0.5
BNIP3-202ENST00000540159 NMES1Q9C002 83 aa11.9□□□□□ -0.5
BNIP3-202ENST00000540159 SLC26A1Q9H2B4 701 aa11.9□□□□□ -0.5
BNIP3-202ENST00000540159 TAF9BQ9HBM6 251 aa11.9□□□□□ -0.5
BNIP3-202ENST00000540159 PCDHB16Q9NRJ7 776 aa11.9□□□□□ -0.5
BNIP3-202ENST00000540159 C9J4A7 227 aa11.9□□□□□ -0.51
BNIP3-202ENST00000540159 SCGNO76038 276 aa11.9□□□□□ -0.51
BNIP3-202ENST00000540159 SPEM2Q0P670 501 aa11.9□□□□□ -0.51
BNIP3-202ENST00000540159 TGIF1Q15583 401 aa11.9□□□□□ -0.51
BNIP3-202ENST00000540159 CEACAM16Q2WEN9 425 aa11.9□□□□□ -0.51
BNIP3-202ENST00000540159 OPN5Q6U736 354 aa11.9□□□□□ -0.51
BNIP3-202ENST00000540159 RNF141Q8WVD5 230 aa11.9□□□□□ -0.51
BNIP3-202ENST00000540159 HAS2Q92819 552 aa11.9□□□□□ -0.51
BNIP3-202ENST00000540159 C20orf24Q9BUV8 137 aa11.9□□□□□ -0.51
BNIP3-202ENST00000540159 PCED1AQ9H1Q7 454 aa11.9□□□□□ -0.51
BNIP3-202ENST00000540159 ETV2O00321 342 aaPredicted RBP11.89□□□□□ -0.51
BNIP3-202ENST00000540159 OR7C1O76099 320 aaPredicted RBP11.89□□□□□ -0.51
BNIP3-202ENST00000540159 OR5AC1P0C628 307 aa11.89□□□□□ -0.51
BNIP3-202ENST00000540159 MUC1P15941 1255 aaPredicted RBP11.89□□□□□ -0.51
BNIP3-202ENST00000540159 CTRB1P17538 263 aa11.89□□□□□ -0.51
BNIP3-202ENST00000540159 HLA-GP17693 338 aa11.89□□□□□ -0.51
BNIP3-202ENST00000540159 ZNF84P51523 738 aa11.89□□□□□ -0.51
BNIP3-202ENST00000540159 CTRB2Q6GPI1 263 aa11.89□□□□□ -0.51
BNIP3-202ENST00000540159 FAHD2BQ6P2I3 314 aaPredicted RBP11.89□□□□□ -0.51
BNIP3-202ENST00000540159 FAM122CQ6P4D5 195 aa11.89□□□□□ -0.51
BNIP3-202ENST00000540159 PRSS54Q6PEW0 395 aa11.89□□□□□ -0.51
BNIP3-202ENST00000540159 SLC22A25Q6T423 547 aa11.89□□□□□ -0.51
BNIP3-202ENST00000540159 LYZL2Q7Z4W2 148 aa11.89□□□□□ -0.51
BNIP3-202ENST00000540159 TMEM123Q8N131 208 aa11.89□□□□□ -0.51
BNIP3-202ENST00000540159 CLRN3Q8NCR9 226 aa11.89□□□□□ -0.51
BNIP3-202ENST00000540159 ARL11Q969Q4 196 aa11.89□□□□□ -0.51
BNIP3-202ENST00000540159 ERGIC1Q969X5 290 aa11.89□□□□□ -0.51
BNIP3-202ENST00000540159 BORCS8Q96FH0 119 aa11.89□□□□□ -0.51
BNIP3-202ENST00000540159 FAHD2AQ96GK7 314 aa11.89□□□□□ -0.51
BNIP3-202ENST00000540159 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.89□□□□□ -0.511e-6■■■■■ 29.8
BNIP3-202ENST00000540159 PARPBPQ9NWS1 579 aa11.89□□□□□ -0.51
BNIP3-202ENST00000540159 ICE1Q9Y2F5 2266 aa11.89□□□□□ -0.51
BNIP3-202ENST00000540159 IGKV1-12A0A0C4DH73 117 aa11.89□□□□□ -0.51
BNIP3-202ENST00000540159 IFNA2P01563 188 aa11.89□□□□□ -0.51
BNIP3-202ENST00000540159 IGKV1D-12P01611 117 aa11.89□□□□□ -0.51
BNIP3-202ENST00000540159 CARD18P57730 90 aa11.89□□□□□ -0.51
BNIP3-202ENST00000540159 SRSF4Q08170 494 aaKnown RBP11.89□□□□□ -0.51
BNIP3-202ENST00000540159 GGNBP1Q5YKI7 109 aa11.89□□□□□ -0.51
BNIP3-202ENST00000540159 SPINK14Q6IE38 97 aa11.89□□□□□ -0.51
BNIP3-202ENST00000540159 RPUSD3Q6P087 351 aaKnown RBP11.89□□□□□ -0.51
BNIP3-202ENST00000540159 EIF4E3Q8N5X7 224 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms