RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 TIA1P31483 386 aaKnown RBP eCLIP1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 CFHR2P36980 270 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 RPL5P46777 297 aaKnown RBP1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 NPBWR2P48146 333 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 PPT1P50897 306 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 GZMMP51124 257 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 ATP4BP51164 291 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 IDH3GP51553 393 aaPredicted RBP1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 CCR6P51684 374 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 UCNP55089 124 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 LIM2P55344 173 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 RAB38P57729 211 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 OR4D2P58180 307 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 ERVS71-1P61550 626 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 LSM6P62312 80 aaKnown RBP1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 BTN3A2P78410 334 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 FAM3AP98173 230 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 ZNF763Q0D2J5 394 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 FUT5Q11128 374 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 FUT7Q11130 342 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 GANABQ14697 944 aaKnown RBP1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 TGIF1Q15583 401 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 TRAM1Q15629 374 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 KCNJ8Q15842 424 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 TNXAQ16473 311 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 MAPK14Q16539 360 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 HAGHQ16775 308 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 MEP1AQ16819 746 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 CNPY1Q3B7I2 92 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 BSXQ3C1V8 233 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 ARHGAP11BQ3KRB8 267 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 RFTN2Q52LD8 501 aaPredicted RBP1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 ACSM3Q53FZ2 586 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 AGKQ53H12 422 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 PDZD11Q5EBL8 140 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 FGD3Q5JSP0 725 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 ATAD3CQ5T2N8 411 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 OGFRL1Q5TC84 451 aaPredicted RBP1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 FRG2Q64ET8 278 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 ELP2Q6IA86 826 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 H3F3CQ6NXT2 135 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 MED27Q6P2C8 311 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 NIPAL3Q6P499 406 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 FAM199XQ6PEV8 388 aaPredicted RBP1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 CBLN3Q6UW01 205 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 EPGNQ6UW88 154 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 ASCL4Q6XD76 172 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 RBMS3Q6XE24 437 aaKnown RBP1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 DGAT2L6Q6ZPD8 337 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 ZNF621Q6ZSS3 439 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 ZCCHC23Q6ZST2 131 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 COMMD6Q7Z4G1 85 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 CPEB2Q7Z5Q1 589 aaKnown RBP1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 TMEM144Q7Z5S9 345 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 NRARPQ7Z6K4 114 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 TMPRSS11BQ86T26 416 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 TBC1D26Q86UD7 250 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 C17orf64Q86WR6 236 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 WDFY1Q8IWB7 410 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 MSRB3Q8IXL7 192 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 PUSL1Q8N0Z8 303 aaKnown RBP1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 OR2L13Q8N349 312 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 MTURNQ8N3F0 131 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 LRRC18Q8N456 261 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 C2orf73Q8N5S3 287 aaPredicted RBP1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 TMEM156Q8N614 296 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 CPSF7Q8N684 471 aaKnown RBP1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 TMEM251Q8N6I4 163 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 Q8N9G6 341 aaPredicted RBP1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 CCDC71LQ8N9Z2 235 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 GATSQ8NAP1 163 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 INO80EQ8NBZ0 244 aaPredicted RBP1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 CATSPER1Q8NEC5 780 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 PXT1Q8NFP0 134 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 OR52H1Q8NGJ2 320 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 OR10S1Q8NGN2 331 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 OR2Y1Q8NGV0 311 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 OR6X1Q8NH79 312 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 OR14L1PQ8NHC6 308 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 NUBPLQ8TB37 319 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 MRAPQ8TCY5 172 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 ZNF675Q8TD23 568 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 ZNF721Q8TF20 911 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 CT55Q8WUE5 264 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 TWIST2Q8WVJ9 160 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 ZDHHC19Q8WVZ1 309 aaPredicted RBP1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 APOBEC4Q8WW27 367 aaKnown RBP1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 APH1BQ8WW43 257 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 DNAJC9Q8WXX5 260 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 PIGCQ92535 297 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 CDS1Q92903 461 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 FGF11Q92914 225 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 TSLPQ969D9 159 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 UCN3Q969E3 161 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 CREB3L1Q96BA8 519 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 APH1AQ96BI3 265 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 TESCQ96BS2 214 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 C12orf43Q96C57 262 aaKnown RBP1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 CCDC126Q96EE4 140 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 SMIM12Q96EX1 92 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms