RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 IP6K3Q96PC2 410 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 MENTQ9BUN1 341 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 MRPS18AQ9NVS2 196 aaKnown RBP6.2□□□□□ -1.42
SORT1-209ENST00000538502 ISLRO14498 428 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 DHRS3O75911 302 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 CST7O76096 145 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 ABLIM3O94929 683 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 TTRP02766 147 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 SP1P08047 785 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 CYB561P49447 251 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 FAM53BQ14153 422 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 VMA21Q3ZAQ7 101 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 PABPC1L2AQ5JQF8 200 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 OR2B11Q5JQS5 317 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 WDR38Q5JTN6 314 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 ASTLQ6HA08 431 aaPredicted RBP6.2□□□□□ -1.42
SORT1-209ENST00000538502 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.2□□□□□ -1.426e-7■■■■■ 32.5
SORT1-209ENST00000538502 SHISA6Q6ZSJ9 500 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 OR10V1Q8NGI7 309 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 OR2T6Q8NHC8 308 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 TXNDC17Q9BRA2 123 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 TBX21Q9UL17 535 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 TNFSF18Q9UNG2 199 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 ANKRD12Q6UB98 2062 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 FGF17O60258 216 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 ICOSLGO75144 302 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 MT-ND6P03923 174 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 AREGP15514 252 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 CLN3Q13286 438 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 C9orf152Q5JTZ5 239 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 FAM209BQ5JX69 171 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 LDLRAD1Q5T700 205 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 DOLPP1Q86YN1 238 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 C12orf76Q8N812 135 aaPredicted RBP6.2□□□□□ -1.42
SORT1-209ENST00000538502 SCCPDHQ8NBX0 429 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 OR1L1Q8NH94 360 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 ZNF707Q96C28 371 aaPredicted RBP6.2□□□□□ -1.42
SORT1-209ENST00000538502 POM121Q96HA1 1249 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 OR1A1Q9P1Q5 309 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 H3BQ15 152 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 BMPR1BO00238 502 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 GYPAP02724 150 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 GAPDHP04406 335 aaKnown RBP6.2□□□□□ -1.42
SORT1-209ENST00000538502 HOXA6P31267 233 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 RPL24P83731 157 aaKnown RBP6.2□□□□□ -1.42
SORT1-209ENST00000538502 COL19A1Q14993 1142 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 AGERQ15109 404 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 PRAMEF20Q5VT98 475 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 C9orf135Q5VTT2 229 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 DHRS7BQ6IAN0 325 aaPredicted RBP6.2□□□□□ -1.42
SORT1-209ENST00000538502 TMEFF1Q8IYR6 380 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 TIMD4Q96H15 378 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 OR6C1Q96RD1 312 aa6.2□□□□□ -1.42
SORT1-209ENST00000538502 TECRQ9NZ01 308 aaKnown RBP6.2□□□□□ -1.42
SORT1-209ENST00000538502 PPM1DO15297 605 aa6.19□□□□□ -1.42
SORT1-209ENST00000538502 CBLN2Q8IUK8 224 aa6.19□□□□□ -1.42
SORT1-209ENST00000538502 TMEM251Q8N6I4 163 aa6.19□□□□□ -1.42
SORT1-209ENST00000538502 MIXL1Q9H2W2 232 aa6.19□□□□□ -1.42
SORT1-209ENST00000538502 KCNE1BA0A087WTH5 132 aa6.19□□□□□ -1.42
SORT1-209ENST00000538502 IGSF23A1L1A6 192 aa6.19□□□□□ -1.42
SORT1-209ENST00000538502 KCNAB3O43448 404 aa6.19□□□□□ -1.42
SORT1-209ENST00000538502 EDIL3O43854 480 aa6.19□□□□□ -1.42
SORT1-209ENST00000538502 ONECUT2O95948 504 aa6.19□□□□□ -1.42
SORT1-209ENST00000538502 HAND1O96004 215 aa6.19□□□□□ -1.42
SORT1-209ENST00000538502 FAM87AP0C7U9 286 aa6.19□□□□□ -1.42
SORT1-209ENST00000538502 DYNLT3P51808 116 aa6.19□□□□□ -1.42
SORT1-209ENST00000538502 PPP1CAP62136 330 aa6.19□□□□□ -1.42
SORT1-209ENST00000538502 DHRS13Q6UX07 377 aa6.19□□□□□ -1.42
SORT1-209ENST00000538502 C12orf54Q6X4T0 127 aa6.19□□□□□ -1.42
SORT1-209ENST00000538502 LINC00596Q86U02 117 aa6.19□□□□□ -1.42
SORT1-209ENST00000538502 VN1R2Q8NFZ6 395 aa6.19□□□□□ -1.42
SORT1-209ENST00000538502 OR52L2PQ8NGH6 319 aa6.19□□□□□ -1.42
SORT1-209ENST00000538502 NAGKQ9UJ70 344 aa6.19□□□□□ -1.42
SORT1-209ENST00000538502 ZFP30Q9Y2G7 519 aa6.19□□□□□ -1.42
SORT1-209ENST00000538502 SLC22A20A6NK97 555 aa6.19□□□□□ -1.42
SORT1-209ENST00000538502 CDS2O95674 445 aa6.19□□□□□ -1.42
SORT1-209ENST00000538502 CYB5R3P00387 301 aaPredicted RBP6.19□□□□□ -1.42
SORT1-209ENST00000538502 SLC25A5P05141 298 aaKnown RBP6.19□□□□□ -1.42
SORT1-209ENST00000538502 CDKN2AP42771 156 aaKnown RBP6.19□□□□□ -1.42
SORT1-209ENST00000538502 RPS16P62249 146 aaKnown RBP6.19□□□□□ -1.42
SORT1-209ENST00000538502 ISXQ2M1V0 245 aa6.19□□□□□ -1.42
SORT1-209ENST00000538502 SLC35E3Q7Z769 313 aa6.19□□□□□ -1.42
SORT1-209ENST00000538502 LINC01465Q8N7H1 131 aa6.19□□□□□ -1.42
SORT1-209ENST00000538502 ABHD14BQ96IU4 210 aa6.19□□□□□ -1.42
SORT1-209ENST00000538502 ADTRPQ96IZ2 230 aa6.19□□□□□ -1.42
SORT1-209ENST00000538502 HES4Q9HCC6 221 aa6.19□□□□□ -1.42
SORT1-209ENST00000538502 TCF21O43680 179 aa6.19□□□□□ -1.42
SORT1-209ENST00000538502 HAAOP46952 286 aa6.19□□□□□ -1.42
SORT1-209ENST00000538502 RAE1P78406 368 aaKnown RBP6.19□□□□□ -1.42
SORT1-209ENST00000538502 RFLNAQ6ZTI6 216 aa6.19□□□□□ -1.42
SORT1-209ENST00000538502 ERASQ7Z444 233 aa6.19□□□□□ -1.42
SORT1-209ENST00000538502 H1FOOQ8IZA3 346 aaPredicted RBP6.19□□□□□ -1.42
SORT1-209ENST00000538502 C17orf78Q8N4C9 275 aa6.19□□□□□ -1.42
SORT1-209ENST00000538502 UBALD1Q8TB05 177 aa6.19□□□□□ -1.42
SORT1-209ENST00000538502 ABHD1Q96SE0 405 aa6.19□□□□□ -1.42
SORT1-209ENST00000538502 CD207Q9UJ71 328 aa6.19□□□□□ -1.42
SORT1-209ENST00000538502 TMEM238LA0A1B0GVL6 79 aa6.19□□□□□ -1.42
SORT1-209ENST00000538502 A6NJY4 79 aa6.19□□□□□ -1.42
SORT1-209ENST00000538502 GEMIN2O14893 280 aaKnown RBP6.19□□□□□ -1.42
SORT1-209ENST00000538502 DHHO43323 396 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms