RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 RAC3P60763 192 aa14.98□□□□□ -0.01
SCARB1-205ENST00000538291 ZNF574Q6ZN55 896 aaPredicted RBP14.98□□□□□ -0.01
SCARB1-205ENST00000538291 BHLHA15Q7RTS1 189 aaPredicted RBP14.98□□□□□ -0.01
SCARB1-205ENST00000538291 PRR7Q8TB68 274 aa14.98□□□□□ -0.01
SCARB1-205ENST00000538291 TSPAN32Q96QS1 320 aa14.98□□□□□ -0.01
SCARB1-205ENST00000538291 LSM2Q9Y333 95 aaKnown RBP14.98□□□□□ -0.01
SCARB1-205ENST00000538291 OR4A8P0C604 315 aa14.98□□□□□ -0.01
SCARB1-205ENST00000538291 Q3ZCU0 254 aa14.98□□□□□ -0.01
SCARB1-205ENST00000538291 C16orf47Q6ZP98 133 aaPredicted RBP14.98□□□□□ -0.01
SCARB1-205ENST00000538291 SH2D5Q6ZV89 423 aa14.98□□□□□ -0.01
SCARB1-205ENST00000538291 COX14Q96I36 57 aa14.98□□□□□ -0.01
SCARB1-205ENST00000538291 C4orf45Q96LM5 186 aa14.98□□□□□ -0.01
SCARB1-205ENST00000538291 FAM103A1Q9BTL3 118 aaKnown RBP14.98□□□□□ -0.01
SCARB1-205ENST00000538291 TMEM208Q9BTX3 173 aa14.98□□□□□ -0.01
SCARB1-205ENST00000538291 FSCN3Q9NQT6 498 aa14.98□□□□□ -0.01
SCARB1-205ENST00000538291 C20orf141Q9NUB4 165 aa14.98□□□□□ -0.01
SCARB1-205ENST00000538291 C3orf80F5H4A9 247 aa14.97□□□□□ -0.01
SCARB1-205ENST00000538291 DNASE2O00115 360 aaPredicted RBP14.97□□□□□ -0.01
SCARB1-205ENST00000538291 PRR35P0CG20 571 aa14.97□□□□□ -0.01
SCARB1-205ENST00000538291 MLF1P58340 268 aa14.97□□□□□ -0.01
SCARB1-205ENST00000538291 BAK1Q16611 211 aa14.97□□□□□ -0.01
SCARB1-205ENST00000538291 FAM109BQ6ICB4 259 aaPredicted RBP14.97□□□□□ -0.01
SCARB1-205ENST00000538291 WDR74Q6RFH5 385 aaPredicted RBP14.97□□□□□ -0.01
SCARB1-205ENST00000538291 VN1R4Q7Z5H5 301 aa14.97□□□□□ -0.01
SCARB1-205ENST00000538291 ST8SIA2Q92186 375 aa14.97□□□□□ -0.01
SCARB1-205ENST00000538291 WDR61Q9GZS3 305 aaKnown RBP14.97□□□□□ -0.01
SCARB1-205ENST00000538291 TMEM231Q9H6L2 316 aa14.97□□□□□ -0.01
SCARB1-205ENST00000538291 OR6C3Q9NZP0 311 aa14.97□□□□□ -0.01
SCARB1-205ENST00000538291 TRAV38-1A0A0B4J264 116 aa14.97□□□□□ -0.01
SCARB1-205ENST00000538291 HIST1H1DP16402 221 aaKnown RBP14.97□□□□□ -0.01
SCARB1-205ENST00000538291 LPAR6P43657 344 aa14.97□□□□□ -0.01
SCARB1-205ENST00000538291 LIMK1P53667 647 aa14.97□□□□□ -0.01
SCARB1-205ENST00000538291 OXA1LQ15070 435 aa14.97□□□□□ -0.01
SCARB1-205ENST00000538291 ZNF141Q15928 474 aa14.97□□□□□ -0.01
SCARB1-205ENST00000538291 OIT3Q8WWZ8 545 aa14.97□□□□□ -0.01
SCARB1-205ENST00000538291 CXorf58Q96LI9 332 aa14.97□□□□□ -0.01
SCARB1-205ENST00000538291 EVPLQ92817 2033 aa14.97□□□□□ -0.01
SCARB1-205ENST00000538291 GP1BAP07359 652 aa14.97□□□□□ -0.01
SCARB1-205ENST00000538291 ANKRD34CP0C6C1 535 aa14.97□□□□□ -0.01
SCARB1-205ENST00000538291 H3F3AP84243 136 aa14.97□□□□□ -0.01
SCARB1-205ENST00000538291 ARHGAP5-AS1Q96IT6 56 aa14.97□□□□□ -0.01
SCARB1-205ENST00000538291 CYSLTR2Q9NS75 346 aa14.97□□□□□ -0.01
SCARB1-205ENST00000538291 MRPL22Q9NWU5 206 aaKnown RBP14.97□□□□□ -0.01
SCARB1-205ENST00000538291 MPC1Q9Y5U8 109 aa14.97□□□□□ -0.01
SCARB1-205ENST00000538291 CD82P27701 267 aa14.97□□□□□ -0.01
SCARB1-205ENST00000538291 A0A1B0GTQ1 180 aa14.97□□□□□ -0.01
SCARB1-205ENST00000538291 PLPP3O14495 311 aa14.97□□□□□ -0.01
SCARB1-205ENST00000538291 PGA3P0DJD8 388 aa14.97□□□□□ -0.01
SCARB1-205ENST00000538291 MPGP29372 298 aa14.97□□□□□ -0.01
SCARB1-205ENST00000538291 BRS3P32247 399 aa14.97□□□□□ -0.01
SCARB1-205ENST00000538291 FAM3AP98173 230 aa14.97□□□□□ -0.01
SCARB1-205ENST00000538291 PAX5Q02548 391 aa14.97□□□□□ -0.01
SCARB1-205ENST00000538291 LINC00303Q3SY05 128 aa14.97□□□□□ -0.01
SCARB1-205ENST00000538291 MRGPREQ86SM8 312 aa14.97□□□□□ -0.01
SCARB1-205ENST00000538291 OR6S1Q8NH40 331 aa14.97□□□□□ -0.01
SCARB1-205ENST00000538291 TMED3Q9Y3Q3 217 aa14.97□□□□□ -0.01
SCARB1-205ENST00000538291 GPANK1O95872 356 aa14.96□□□□□ -0.01
SCARB1-205ENST00000538291 ACTL6AO96019 429 aa14.96□□□□□ -0.01
SCARB1-205ENST00000538291 CDK5Q00535 292 aa14.96□□□□□ -0.01
SCARB1-205ENST00000538291 SKP2Q13309 424 aa14.96□□□□□ -0.01
SCARB1-205ENST00000538291 C20orf196Q8IYI0 205 aa14.96□□□□□ -0.01
SCARB1-205ENST00000538291 SLC24A4Q8NFF2 622 aa14.96□□□□□ -0.01
SCARB1-205ENST00000538291 ADRB1P08588 477 aa14.96□□□□□ -0.01
SCARB1-205ENST00000538291 B3GNTL1Q67FW5 361 aaPredicted RBP14.96□□□□□ -0.01
SCARB1-205ENST00000538291 ZNF425Q6IV72 752 aa14.96□□□□□ -0.01
SCARB1-205ENST00000538291 WDR89Q96FK6 387 aaPredicted RBP14.96□□□□□ -0.01
SCARB1-205ENST00000538291 CRISPLD2Q9H0B8 497 aa14.96□□□□□ -0.01
SCARB1-205ENST00000538291 PDCD6O75340 191 aa14.96□□□□□ -0.02
SCARB1-205ENST00000538291 CCL2P13500 99 aa14.96□□□□□ -0.02
SCARB1-205ENST00000538291 HMGCLL1Q8TB92 370 aa14.96□□□□□ -0.02
SCARB1-205ENST00000538291 TMPRSS5Q9H3S3 457 aa14.96□□□□□ -0.02
SCARB1-205ENST00000538291 FAM60AQ9NP50 221 aa14.96□□□□□ -0.02
SCARB1-205ENST00000538291 ARL2-SNX15V9GYD0 113 aa14.96□□□□□ -0.02
SCARB1-205ENST00000538291 ACSM4P0C7M7 580 aa14.95□□□□□ -0.02
SCARB1-205ENST00000538291 ZNF320A2RRD8 509 aa14.95□□□□□ -0.02
SCARB1-205ENST00000538291 BCL2L11O43521 198 aa14.95□□□□□ -0.02
SCARB1-205ENST00000538291 ASCL1P50553 236 aa14.95□□□□□ -0.02
SCARB1-205ENST00000538291 ERVFC1-1P60608 527 aa14.95□□□□□ -0.02
SCARB1-205ENST00000538291 SP6Q3SY56 376 aa14.95□□□□□ -0.02
SCARB1-205ENST00000538291 PDZD11Q5EBL8 140 aa14.95□□□□□ -0.02
SCARB1-205ENST00000538291 ZDHHC22Q8N966 263 aa14.95□□□□□ -0.02
SCARB1-205ENST00000538291 OR8B3Q8NGG8 313 aa14.95□□□□□ -0.02
SCARB1-205ENST00000538291 OR52B4Q8NGK2 314 aa14.95□□□□□ -0.02
SCARB1-205ENST00000538291 OR8B2Q96RD0 313 aa14.95□□□□□ -0.02
SCARB1-205ENST00000538291 RASL10BQ96S79 203 aa14.95□□□□□ -0.02
SCARB1-205ENST00000538291 SLC6A13Q9NSD5 602 aa14.95□□□□□ -0.02
SCARB1-205ENST00000538291 SLC2A8Q9NY64 477 aa14.95□□□□□ -0.02
SCARB1-205ENST00000538291 WNT3P56703 355 aa14.95□□□□□ -0.02
SCARB1-205ENST00000538291 LRRTM1Q86UE6 522 aa14.95□□□□□ -0.02
SCARB1-205ENST00000538291 RELL2Q8NC24 303 aaPredicted RBP14.95□□□□□ -0.02
SCARB1-205ENST00000538291 OR6X1Q8NH79 312 aa14.95□□□□□ -0.02
SCARB1-205ENST00000538291 FAAP24Q9BTP7 215 aa14.95□□□□□ -0.02
SCARB1-205ENST00000538291 SFTPCP11686 197 aa14.95□□□□□ -0.02
SCARB1-205ENST00000538291 CCL4P13236 92 aa14.95□□□□□ -0.02
SCARB1-205ENST00000538291 ZNF547Q8IVP9 402 aa14.95□□□□□ -0.02
SCARB1-205ENST00000538291 HSD17B10Q99714 261 aaKnown RBP14.95□□□□□ -0.02
SCARB1-205ENST00000538291 SF3B5Q9BWJ5 86 aaKnown RBP14.95□□□□□ -0.02
SCARB1-205ENST00000538291 ZDHHC11Q9H8X9 412 aa14.95□□□□□ -0.02
SCARB1-205ENST00000538291 A0A1W2PPQ1 181 aa14.94□□□□□ -0.02
SCARB1-205ENST00000538291 OR2M5A3KFT3 312 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms