RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 ASCL1P50553 236 aa7.59□□□□□ -1.19
UBE3B-208ENST00000538070 SSBP1Q04837 148 aaKnown RBP7.59□□□□□ -1.19
UBE3B-208ENST00000538070 FGL1Q08830 312 aa7.59□□□□□ -1.19
UBE3B-208ENST00000538070 AIMP2Q13155 320 aaKnown RBP7.59□□□□□ -1.19
UBE3B-208ENST00000538070 TRA2AQ13595 282 aaKnown RBP eCLIP7.59□□□□□ -1.19
UBE3B-208ENST00000538070 DRAM2Q6UX65 266 aa7.59□□□□□ -1.19
UBE3B-208ENST00000538070 DNM1P46Q6ZS02 220 aa7.59□□□□□ -1.19
UBE3B-208ENST00000538070 SULF2Q8IWU5 870 aa7.59□□□□□ -1.19
UBE3B-208ENST00000538070 C1orf147Q96MC9 270 aaPredicted RBP7.59□□□□□ -1.19
UBE3B-208ENST00000538070 TMEM38BQ9NVV0 291 aa7.59□□□□□ -1.19
UBE3B-208ENST00000538070 LRRC3CA6NJW4 275 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 ZNF587BE7ETH6 402 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 DIRAS3O95661 229 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 GSTP1P09211 210 aaKnown RBP7.58□□□□□ -1.2
UBE3B-208ENST00000538070 OR5H8P0DN80 308 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 RAB32Q13637 225 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 IAH1Q2TAA2 248 aaPredicted RBP7.58□□□□□ -1.2
UBE3B-208ENST00000538070 TMEM65Q6PI78 240 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 SLC22A25Q6T423 547 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 FAM180AQ6UWF9 173 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 DTWD2Q8NBA8 298 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 SUMF1Q8NBK3 374 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 ZBTB44Q8NCP5 570 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 OR10C1Q96KK4 312 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 BOKQ9UMX3 212 aaPredicted RBP7.58□□□□□ -1.2
UBE3B-208ENST00000538070 HMSDA8MTL9 139 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 XRCC2O43543 280 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 SERPINA7P05543 415 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 M6PRP20645 277 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 THBS4P35443 961 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 NPBWR2P48146 333 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 GPM6AP51674 278 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 PMP22Q01453 160 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 SSPNQ14714 243 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 TMEM128Q5BJH2 165 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 GCNT2Q8N0V5 402 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 PXT1Q8NFP0 134 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 MITD1Q8WV92 249 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 C17orf50Q8WW18 174 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 HAS2Q92819 552 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 ZNF488Q96MN9 340 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 CHST5Q9GZS9 411 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 HRH4Q9H3N8 390 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 GPR35Q9HC97 309 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 OR5AC2Q9NZP5 309 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 AK3Q9UIJ7 227 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 TIMM10BQ9Y5J6 103 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 SPTAN1Q13813 2472 aaKnown RBP7.58□□□□□ -1.2
UBE3B-208ENST00000538070 IGKV1-27A0A075B6S5 117 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 TRAV39A0A0B4J263 110 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 MSGN1A6NI15 193 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 TTLL8A6PVC2 850 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 GSK3AP49840 483 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 SPEM2Q0P670 501 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 HIST3H3Q16695 136 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 FAM27BQ5VT28 67 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 SIGIRRQ6IA17 410 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 GGNQ86UU5 652 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 LYPD6Q86Y78 171 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 ADPRHL1Q8NDY3 354 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 OR56B2PQ8NGI1 322 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 OR52H1Q8NGJ2 320 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 TMEM54Q969K7 222 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 SLAMF9Q96A28 289 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 TAAR9Q96RI9 348 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 SULT4A1Q9BR01 284 aa7.58□□□□□ -1.2
UBE3B-208ENST00000538070 MFNGO00587 321 aa7.57□□□□□ -1.2
UBE3B-208ENST00000538070 SCGNO76038 276 aa7.57□□□□□ -1.2
UBE3B-208ENST00000538070 HAAOP46952 286 aa7.57□□□□□ -1.2
UBE3B-208ENST00000538070 MRPS34P82930 218 aaKnown RBP7.57□□□□□ -1.2
UBE3B-208ENST00000538070 RAB35Q15286 201 aa7.57□□□□□ -1.2
UBE3B-208ENST00000538070 ACOT7LQ6ZUV0 252 aa7.57□□□□□ -1.2
UBE3B-208ENST00000538070 MRPL21Q7Z2W9 205 aaKnown RBP7.57□□□□□ -1.2
UBE3B-208ENST00000538070 OR2W3Q7Z3T1 314 aa7.57□□□□□ -1.2
UBE3B-208ENST00000538070 HOGA1Q86XE5 327 aa7.57□□□□□ -1.2
UBE3B-208ENST00000538070 PP6455Q8WZ26 134 aa7.57□□□□□ -1.2
UBE3B-208ENST00000538070 OR2H1Q9GZK4 316 aa7.57□□□□□ -1.2
UBE3B-208ENST00000538070 TREM1Q9NP99 234 aa7.57□□□□□ -1.2
UBE3B-208ENST00000538070 IL36RNQ9UBH0 155 aa7.57□□□□□ -1.2
UBE3B-208ENST00000538070 ETV2O00321 342 aaPredicted RBP7.57□□□□□ -1.2
UBE3B-208ENST00000538070 HS3ST1O14792 307 aa7.57□□□□□ -1.2
UBE3B-208ENST00000538070 DUS4LO95620 317 aaKnown RBP7.57□□□□□ -1.2
UBE3B-208ENST00000538070 NGFP01138 241 aa7.57□□□□□ -1.2
UBE3B-208ENST00000538070 APOC1P02654 83 aa7.57□□□□□ -1.2
UBE3B-208ENST00000538070 FKBP2P26885 142 aaKnown RBP7.57□□□□□ -1.2
UBE3B-208ENST00000538070 HOXD11P31277 338 aaPredicted RBP7.57□□□□□ -1.2
UBE3B-208ENST00000538070 FCGR2CP31995 323 aa7.57□□□□□ -1.2
UBE3B-208ENST00000538070 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.57□□□□□ -1.2
UBE3B-208ENST00000538070 ZSCAN4Q8NAM6 433 aaPredicted RBP7.57□□□□□ -1.2
UBE3B-208ENST00000538070 CPEB3Q8NE35 698 aaKnown RBP7.57□□□□□ -1.2
UBE3B-208ENST00000538070 OR11L1Q8NGX0 322 aa7.57□□□□□ -1.2
UBE3B-208ENST00000538070 PTX4Q96A99 478 aa7.57□□□□□ -1.2
UBE3B-208ENST00000538070 ALX4Q9H161 411 aaPredicted RBP7.57□□□□□ -1.2
UBE3B-208ENST00000538070 WNT5BQ9H1J7 359 aa7.57□□□□□ -1.2
UBE3B-208ENST00000538070 ABI3Q9P2A4 366 aa7.57□□□□□ -1.2
UBE3B-208ENST00000538070 DMXL1Q9Y485 3027 aa7.57□□□□□ -1.2
UBE3B-208ENST00000538070 A0A0D9SG52 128 aa7.57□□□□□ -1.2
UBE3B-208ENST00000538070 NME2P22392 152 aa7.57□□□□□ -1.2
UBE3B-208ENST00000538070 B3GALT5-AS1P59052 145 aa7.57□□□□□ -1.2
UBE3B-208ENST00000538070 ARG2P78540 354 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms