RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 MFGE8Q08431 387 aaPredicted RBP6.87□□□□□ -1.31
USP28-203ENST00000537490 C2orf68Q2NKX9 166 aa6.87□□□□□ -1.31
USP28-203ENST00000537490 LRRC75BQ2VPJ9 315 aa6.87□□□□□ -1.31
USP28-203ENST00000537490 ZBTB37Q5TC79 503 aa6.87□□□□□ -1.31
USP28-203ENST00000537490 BCDIN3DQ7Z5W3 292 aaKnown RBP6.87□□□□□ -1.31
USP28-203ENST00000537490 ZNF679Q8IYX0 411 aa6.87□□□□□ -1.31
USP28-203ENST00000537490 BATF2Q8N1L9 274 aa6.87□□□□□ -1.31
USP28-203ENST00000537490 C11orf44Q8N8P7 122 aa6.87□□□□□ -1.31
USP28-203ENST00000537490 POC1AQ8NBT0 407 aa6.87□□□□□ -1.31
USP28-203ENST00000537490 CCDC197Q8NCU1 140 aa6.87□□□□□ -1.31
USP28-203ENST00000537490 OR4M1Q8NGD0 313 aa6.87□□□□□ -1.31
USP28-203ENST00000537490 OR2T27Q8NH04 317 aa6.87□□□□□ -1.31
USP28-203ENST00000537490 OR5K1Q8NHB7 308 aa6.87□□□□□ -1.31
USP28-203ENST00000537490 PIFOQ8TCI5 191 aa6.87□□□□□ -1.31
USP28-203ENST00000537490 ITFG2Q969R8 447 aa6.87□□□□□ -1.31
USP28-203ENST00000537490 APOL4Q9BPW4 351 aa6.87□□□□□ -1.31
USP28-203ENST00000537490 MROQ9BYG7 248 aa6.87□□□□□ -1.31
USP28-203ENST00000537490 FAM234AQ9H0X4 552 aa6.87□□□□□ -1.31
USP28-203ENST00000537490 C1orf21Q9H246 121 aa6.87□□□□□ -1.31
USP28-203ENST00000537490 GPR173Q9NS66 373 aa6.87□□□□□ -1.31
USP28-203ENST00000537490 RASL12Q9NYN1 266 aa6.87□□□□□ -1.31
USP28-203ENST00000537490 NUFIP1Q9UHK0 495 aaKnown RBP6.87□□□□□ -1.31
USP28-203ENST00000537490 ENPP5Q9UJA9 477 aa6.87□□□□□ -1.31
USP28-203ENST00000537490 IKZF2Q9UKS7 526 aa6.87□□□□□ -1.31
USP28-203ENST00000537490 PIGLQ9Y2B2 252 aa6.87□□□□□ -1.31
USP28-203ENST00000537490 A0A1B0GTI1 187 aa6.86□□□□□ -1.31
USP28-203ENST00000537490 A6NIN4 97 aa6.86□□□□□ -1.31
USP28-203ENST00000537490 G3V4G9 280 aa6.86□□□□□ -1.31
USP28-203ENST00000537490 J3QT63 122 aa6.86□□□□□ -1.31
USP28-203ENST00000537490 CHST1O43916 411 aa6.86□□□□□ -1.31
USP28-203ENST00000537490 PRKYO43930 277 aa6.86□□□□□ -1.31
USP28-203ENST00000537490 NOS1APO75052 506 aaPredicted RBP6.86□□□□□ -1.31
USP28-203ENST00000537490 FKBP6O75344 327 aa6.86□□□□□ -1.31
USP28-203ENST00000537490 DHRS3O75911 302 aa6.86□□□□□ -1.31
USP28-203ENST00000537490 FAM107AO95990 144 aa6.86□□□□□ -1.31
USP28-203ENST00000537490 PGA5P0DJD9 388 aa6.86□□□□□ -1.31
USP28-203ENST00000537490 COX7A1P24310 79 aa6.86□□□□□ -1.31
USP28-203ENST00000537490 HAAOP46952 286 aa6.86□□□□□ -1.31
USP28-203ENST00000537490 DAPP51397 102 aa6.86□□□□□ -1.31
USP28-203ENST00000537490 BMXP51813 675 aa6.86□□□□□ -1.31
USP28-203ENST00000537490 RPL31P62899 125 aaKnown RBP6.86□□□□□ -1.31
USP28-203ENST00000537490 ZNF273Q14593 569 aa6.86□□□□□ -1.31
USP28-203ENST00000537490 PTGES3Q15185 160 aaKnown RBP6.86□□□□□ -1.31
USP28-203ENST00000537490 ZNF829Q3KNS6 432 aaPredicted RBP6.86□□□□□ -1.31
USP28-203ENST00000537490 ZNF684Q5T5D7 378 aa6.86□□□□□ -1.31
USP28-203ENST00000537490 TMEM42Q69YG0 159 aa6.86□□□□□ -1.31
USP28-203ENST00000537490 PLEKHG7Q6ZR37 379 aa6.86□□□□□ -1.31
USP28-203ENST00000537490 Q6ZTK2 550 aa6.86□□□□□ -1.31
USP28-203ENST00000537490 LHFPL4Q7Z7J7 247 aa6.86□□□□□ -1.31
USP28-203ENST00000537490 SPATA24Q86W54 205 aa6.86□□□□□ -1.31
USP28-203ENST00000537490 DYNAPQ8N1N2 210 aa6.86□□□□□ -1.31
USP28-203ENST00000537490 ZNF561Q8N587 486 aa6.86□□□□□ -1.31
USP28-203ENST00000537490 OR14K1Q8NGZ2 314 aa6.86□□□□□ -1.31
USP28-203ENST00000537490 ASB17Q8WXJ9 295 aa6.86□□□□□ -1.31
USP28-203ENST00000537490 CFHR4Q92496 578 aa6.86□□□□□ -1.31
USP28-203ENST00000537490 NRIP2Q9BQI9 281 aa6.86□□□□□ -1.31
USP28-203ENST00000537490 TEX12Q9BXU0 123 aa6.86□□□□□ -1.31
USP28-203ENST00000537490 HEXA-AS1Q9H8Q6 139 aa6.86□□□□□ -1.31
USP28-203ENST00000537490 DNAJB9Q9UBS3 223 aa6.86□□□□□ -1.31
USP28-203ENST00000537490 V9GYS6 101 aa6.86□□□□□ -1.31
USP28-203ENST00000537490 VWFP04275 2813 aa6.86□□□□□ -1.31
USP28-203ENST00000537490 TCRBV3S1A0A5B6 114 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 PQLC2LA1A4F0 135 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 MEX3AA1L020 520 aaKnown RBP6.85□□□□□ -1.31
USP28-203ENST00000537490 FAM90A8PA6NJQ4 464 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 LOC110117498-PIK3R3F6TDL0 507 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 M0R129 80 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 SLC1A7O00341 560 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 NXPH2O95156 264 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 TK1P04183 234 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 PIPP12273 146 aaPredicted RBP6.85□□□□□ -1.31
USP28-203ENST00000537490 RAB13P51153 203 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 DLX6P56179 175 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 CXCR4P61073 352 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 EFNB1P98172 346 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 FLOT2Q14254 428 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 AANATQ16613 207 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 SMIM21Q3B7S5 101 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 BEAN1Q3B7T3 259 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 CLVS2Q5SYC1 327 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 LDLRAD2Q5SZI1 272 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 LCN1P1Q5VSP4 162 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 AADACL4Q5VUY2 407 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 FAHD1Q6P587 224 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 ZNF322Q6U7Q0 402 aaPredicted RBP6.85□□□□□ -1.31
USP28-203ENST00000537490 ZNF782Q6ZMW2 699 aaPredicted RBP6.85□□□□□ -1.31
USP28-203ENST00000537490 Q6ZSR3 168 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 ASRGL1Q7L266 308 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 MEPCEQ7L2J0 689 aaKnown RBP6.85□□□□□ -1.31
USP28-203ENST00000537490 ANGPTL5Q86XS5 388 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 ZNF573Q86YE8 665 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 CALHM1Q8IU99 346 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 SLC35F2Q8IXU6 374 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 ELMOD2Q8IZ81 293 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 LYG1Q8N1E2 194 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 KLHDC1Q8N7A1 406 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 OR4C13Q8NGP0 309 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 OR2T6Q8NHC8 308 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 CNN2Q99439 309 aaKnown RBP6.85□□□□□ -1.31
USP28-203ENST00000537490 RANBP3Q9H6Z4 567 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms