RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 KCTD9Q7L273 389 aa11.63□□□□□ -0.55
VPS33B-202ENST00000535906 TUSC5Q8IXB3 177 aa11.63□□□□□ -0.55
VPS33B-202ENST00000535906 IL22RA1Q8N6P7 574 aa11.63□□□□□ -0.55
VPS33B-202ENST00000535906 THAP6Q8TBB0 222 aa11.63□□□□□ -0.55
VPS33B-202ENST00000535906 SLC7A10Q9NS82 523 aa11.63□□□□□ -0.55
VPS33B-202ENST00000535906 IGKV1-27A0A075B6S5 117 aa11.62□□□□□ -0.55
VPS33B-202ENST00000535906 LGALS8O00214 317 aa11.62□□□□□ -0.55
VPS33B-202ENST00000535906 LUMP51884 338 aaPredicted RBP11.62□□□□□ -0.55
VPS33B-202ENST00000535906 PCBD1P61457 104 aa11.62□□□□□ -0.55
VPS33B-202ENST00000535906 TMEM128Q5BJH2 165 aa11.62□□□□□ -0.55
VPS33B-202ENST00000535906 CPEB3Q8NE35 698 aaKnown RBP11.62□□□□□ -0.55
VPS33B-202ENST00000535906 PHYHIPLQ96FC7 376 aa11.62□□□□□ -0.55
VPS33B-202ENST00000535906 ST6GALNAC5Q9BVH7 336 aa11.62□□□□□ -0.55
VPS33B-202ENST00000535906 TM2D1Q9BX74 207 aa11.62□□□□□ -0.55
VPS33B-202ENST00000535906 PECRQ9BY49 303 aa11.62□□□□□ -0.55
VPS33B-202ENST00000535906 GPR160Q9UJ42 338 aa11.62□□□□□ -0.55
VPS33B-202ENST00000535906 FAM230AA0A1W2PPH8 454 aa11.62□□□□□ -0.55
VPS33B-202ENST00000535906 TEX46H3BTG2 121 aa11.62□□□□□ -0.55
VPS33B-202ENST00000535906 TMEM225BP0DP42 221 aa11.62□□□□□ -0.55
VPS33B-202ENST00000535906 CBX5P45973 191 aa11.62□□□□□ -0.55
VPS33B-202ENST00000535906 TAGLNQ01995 201 aaKnown RBP11.62□□□□□ -0.55
VPS33B-202ENST00000535906 ZNF92Q03936 586 aa11.62□□□□□ -0.55
VPS33B-202ENST00000535906 ATXN7L3Q14CW9 347 aaPredicted RBP11.62□□□□□ -0.55
VPS33B-202ENST00000535906 C9orf135Q5VTT2 229 aa11.62□□□□□ -0.55
VPS33B-202ENST00000535906 MOB3CQ70IA8 216 aa11.62□□□□□ -0.55
VPS33B-202ENST00000535906 KMT2EQ8IZD2 1858 aa11.62□□□□□ -0.55
VPS33B-202ENST00000535906 FNDC9Q8TBE3 224 aa11.62□□□□□ -0.55
VPS33B-202ENST00000535906 DNTTIP1Q9H147 329 aa11.62□□□□□ -0.55
VPS33B-202ENST00000535906 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.62□□□□□ -0.55
VPS33B-202ENST00000535906 GPR132Q9UNW8 380 aa11.62□□□□□ -0.55
VPS33B-202ENST00000535906 SPRY1O43609 319 aaPredicted RBP11.61□□□□□ -0.55
VPS33B-202ENST00000535906 ANGPTL7O43827 346 aa11.61□□□□□ -0.55
VPS33B-202ENST00000535906 SP1P08047 785 aa11.61□□□□□ -0.55
VPS33B-202ENST00000535906 FOXG1P55316 489 aaPredicted RBP11.61□□□□□ -0.55
VPS33B-202ENST00000535906 PLGLB1Q02325 96 aa11.61□□□□□ -0.55
VPS33B-202ENST00000535906 TRIP6Q15654 476 aaKnown RBP11.61□□□□□ -0.55
VPS33B-202ENST00000535906 PABPC1L2AQ5JQF8 200 aa11.61□□□□□ -0.55
VPS33B-202ENST00000535906 SPERTQ8NA61 448 aa11.61□□□□□ -0.55
VPS33B-202ENST00000535906 INO80EQ8NBZ0 244 aaPredicted RBP11.61□□□□□ -0.55
VPS33B-202ENST00000535906 TMEM185AQ8NFB2 350 aa11.61□□□□□ -0.55
VPS33B-202ENST00000535906 MAFIPQ8WZ33 124 aa11.61□□□□□ -0.55
VPS33B-202ENST00000535906 SPSB1Q96BD6 273 aa11.61□□□□□ -0.55
VPS33B-202ENST00000535906 ZNF471Q9BX82 626 aaPredicted RBP11.61□□□□□ -0.55
VPS33B-202ENST00000535906 C5orf66Q9H5L9 145 aa11.61□□□□□ -0.55
VPS33B-202ENST00000535906 CALHM2Q9HA72 323 aa11.61□□□□□ -0.55
VPS33B-202ENST00000535906 EEF1E1-BLOC1S5C9J1V9 151 aa11.61□□□□□ -0.55
VPS33B-202ENST00000535906 BET1O15155 118 aa11.61□□□□□ -0.55
VPS33B-202ENST00000535906 FARS2O95363 451 aaKnown RBP11.61□□□□□ -0.55
VPS33B-202ENST00000535906 PLATP00750 562 aa11.61□□□□□ -0.55
VPS33B-202ENST00000535906 CRHP06850 196 aa11.61□□□□□ -0.55
VPS33B-202ENST00000535906 CPT2P23786 658 aa11.61□□□□□ -0.55
VPS33B-202ENST00000535906 PSMB6P28072 239 aa11.61□□□□□ -0.55
VPS33B-202ENST00000535906 MEOX1P50221 254 aa11.61□□□□□ -0.55
VPS33B-202ENST00000535906 FAM3AP98173 230 aa11.61□□□□□ -0.55
VPS33B-202ENST00000535906 TGIF1Q15583 401 aa11.61□□□□□ -0.55
VPS33B-202ENST00000535906 SMUG1Q53HV7 270 aa11.61□□□□□ -0.55
VPS33B-202ENST00000535906 BEX5Q5H9J7 111 aa11.61□□□□□ -0.55
VPS33B-202ENST00000535906 C6orf201Q7Z4U5 140 aa11.61□□□□□ -0.55
VPS33B-202ENST00000535906 ZNF75AQ96N20 296 aa11.61□□□□□ -0.55
VPS33B-202ENST00000535906 NMES1Q9C002 83 aa11.61□□□□□ -0.55
VPS33B-202ENST00000535906 BARX1Q9HBU1 254 aaPredicted RBP11.61□□□□□ -0.55
VPS33B-202ENST00000535906 MBD2Q9UBB5 411 aa11.61□□□□□ -0.55
VPS33B-202ENST00000535906 GLS2Q9UI32 602 aa11.61□□□□□ -0.55
VPS33B-202ENST00000535906 A0A096LPE4 126 aa11.6□□□□□ -0.55
VPS33B-202ENST00000535906 hCG_38984A0A1B0GV85 526 aa11.6□□□□□ -0.55
VPS33B-202ENST00000535906 A0A1W2PPZ6 126 aa11.6□□□□□ -0.55
VPS33B-202ENST00000535906 C5orf51A6NDU8 294 aa11.6□□□□□ -0.55
VPS33B-202ENST00000535906 ZNF587BE7ETH6 402 aa11.6□□□□□ -0.55
VPS33B-202ENST00000535906 EDN3P14138 238 aa11.6□□□□□ -0.55
VPS33B-202ENST00000535906 GABRR1P24046 479 aa11.6□□□□□ -0.55
VPS33B-202ENST00000535906 NPY4RP50391 375 aa11.6□□□□□ -0.55
VPS33B-202ENST00000535906 ARF1P84077 181 aaKnown RBP11.6□□□□□ -0.55
VPS33B-202ENST00000535906 C3AR1Q16581 482 aa11.6□□□□□ -0.55
VPS33B-202ENST00000535906 FAM74A1Q5RGS3 127 aa11.6□□□□□ -0.55
VPS33B-202ENST00000535906 TMEM42Q69YG0 159 aa11.6□□□□□ -0.55
VPS33B-202ENST00000535906 MDS2Q8NDY4 140 aa11.6□□□□□ -0.55
VPS33B-202ENST00000535906 OR5H2Q8NGV7 314 aa11.6□□□□□ -0.55
VPS33B-202ENST00000535906 Q96M66 194 aa11.6□□□□□ -0.55
VPS33B-202ENST00000535906 FER1L6-AS2Q96M78 137 aa11.6□□□□□ -0.55
VPS33B-202ENST00000535906 IP6K3Q96PC2 410 aa11.6□□□□□ -0.55
VPS33B-202ENST00000535906 LINC00470Q9BZP3 86 aa11.6□□□□□ -0.55
VPS33B-202ENST00000535906 CHMP1AQ9HD42 196 aaPredicted RBP11.6□□□□□ -0.55
VPS33B-202ENST00000535906 FRYQ5TBA9 3013 aa11.6□□□□□ -0.55
VPS33B-202ENST00000535906 SDCBPO00560 298 aaPredicted RBP11.6□□□□□ -0.55
VPS33B-202ENST00000535906 ZNHIT1O43257 154 aa11.6□□□□□ -0.55
VPS33B-202ENST00000535906 NME2P1O60361 137 aa11.6□□□□□ -0.55
VPS33B-202ENST00000535906 SYNGR4O95473 234 aa11.6□□□□□ -0.55
VPS33B-202ENST00000535906 NRASP01111 189 aa11.6□□□□□ -0.55
VPS33B-202ENST00000535906 AMY2BP19961 511 aa11.6□□□□□ -0.55
VPS33B-202ENST00000535906 NME2P22392 152 aa11.6□□□□□ -0.55
VPS33B-202ENST00000535906 FPR2P25090 351 aa11.6□□□□□ -0.55
VPS33B-202ENST00000535906 SERPINF1P36955 418 aa11.6□□□□□ -0.55
VPS33B-202ENST00000535906 SNU13P55769 128 aaKnown RBP11.6□□□□□ -0.55
VPS33B-202ENST00000535906 CYCSP99999 105 aaKnown RBP11.6□□□□□ -0.55
VPS33B-202ENST00000535906 NRN1LQ496H8 165 aa11.6□□□□□ -0.55
VPS33B-202ENST00000535906 PEG10Q86TG7 708 aaKnown RBP11.6□□□□□ -0.55
VPS33B-202ENST00000535906 STPG2Q8N412 459 aa11.6□□□□□ -0.55
VPS33B-202ENST00000535906 TMEM230Q96A57 120 aa11.6□□□□□ -0.55
VPS33B-202ENST00000535906 MRPS24Q96EL2 167 aaKnown RBP11.6□□□□□ -0.55
VPS33B-202ENST00000535906 SCGB3A2Q96PL1 93 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms