RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 BCAT2O15382 392 aaPredicted RBP5.78□□□□□ -1.48
USP28-202ENST00000535607 LATO43561 262 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 OR10H2O60403 315 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 ZNF354AO60765 605 aaPredicted RBP5.78□□□□□ -1.48
USP28-202ENST00000535607 CTSVO60911 334 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 GGCTO75223 188 aaKnown RBP5.78□□□□□ -1.48
USP28-202ENST00000535607 NDUFS6O75380 124 aaKnown RBP5.78□□□□□ -1.48
USP28-202ENST00000535607 ADAP1O75689 374 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 TNFRSF6BO95407 300 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 APBB3O95704 486 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 CSTAP01040 98 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 HBE1P02100 147 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 ISG15P05161 165 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 DANCRP0C864 163 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 HPGDP15428 266 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 TNFRSF1AP19438 455 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 PTNP21246 168 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 HSD11B1P28845 292 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 GRPRP30550 384 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 HOXA6P31267 233 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 ACAA2P42765 397 aaKnown RBP5.78□□□□□ -1.48
USP28-202ENST00000535607 SLC6A8P48029 635 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 ADPRHP54922 357 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 SLC35A1P78382 337 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 DLK1P80370 383 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 H3F3AP84243 136 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 MFGE8Q08431 387 aaPredicted RBP5.78□□□□□ -1.48
USP28-202ENST00000535607 ZNF616Q08AN1 781 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 EIF2B1Q14232 305 aaKnown RBP5.78□□□□□ -1.48
USP28-202ENST00000535607 EBPQ15125 230 aaKnown RBP5.78□□□□□ -1.48
USP28-202ENST00000535607 PPA1Q15181 289 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 UBE2V2Q15819 145 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 USF2Q15853 346 aaPredicted RBP5.78□□□□□ -1.48
USP28-202ENST00000535607 ZNF260Q3ZCT1 412 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 WDR38Q5JTN6 314 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 C9orf152Q5JTZ5 239 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 FHL5Q5TD97 284 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 KIAA0895LQ68EN5 471 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 DEGS2Q6QHC5 323 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 Q6ZS52 159 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 Q6ZWC4 215 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 SLC35D2Q76EJ3 337 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 MRPL52Q86TS9 123 aaKnown RBP5.78□□□□□ -1.48
USP28-202ENST00000535607 CACUL1Q86Y37 369 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 PRSS35Q8N3Z0 413 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 PAQR4Q8N4S7 273 aaPredicted RBP5.78□□□□□ -1.48
USP28-202ENST00000535607 FAM24BQ8N5W8 94 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 ZSCAN4Q8NAM6 433 aaPredicted RBP5.78□□□□□ -1.48
USP28-202ENST00000535607 PLPP5Q8NEB5 264 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 OTOSQ8NHW6 89 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 NUBPLQ8TB37 319 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 ASB5Q8WWX0 329 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 EMG1Q92979 244 aaKnown RBP5.78□□□□□ -1.48
USP28-202ENST00000535607 ARRDC3Q96B67 414 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 RASD2Q96D21 266 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 RAB39BQ96DA2 213 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 GALNT14Q96FL9 552 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 C14orf144Q96I85 54 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 SCN2AQ99250 2005 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 CCDC3Q9BQI4 270 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 URM1Q9BTM9 101 aaKnown RBP5.78□□□□□ -1.48
USP28-202ENST00000535607 OR11A1Q9GZK7 315 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 SLC26A1Q9H2B4 701 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 SEPSECSQ9HD40 501 aaKnown RBP5.78□□□□□ -1.48
USP28-202ENST00000535607 C19orf12Q9NSK7 152 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 FLRT3Q9NZU0 649 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 DKKL1Q9UK85 242 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 KLK13Q9UKR3 277 aa5.78□□□□□ -1.48
USP28-202ENST00000535607 hCG_1809904A0A1W2PP81 198 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 FAM230AA0A1W2PPH8 454 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 A0A1W2PR64 198 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 A0A1W2PRV1 198 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 OR5H15A6NDH6 313 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 IGLON5A6NGN9 336 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 OR5H1A6NKK0 313 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 VWC2LB2RUY7 222 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 DVL1O14640 695 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 LDLRAD4O15165 306 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 HSPA12AO43301 675 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 DNPH1O43598 174 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 GPR137BO60478 399 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 LDB3O75112 727 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 ALOX12BO75342 701 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 DFFBO76075 338 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 ACTL6BO94805 426 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 MT-ATP6P00846 226 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 GCGP01275 180 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 KLK3P07288 261 aaPredicted RBP5.77□□□□□ -1.49
USP28-202ENST00000535607 TBC1D3HP0C7X1 549 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 SLC35E2P0CK97 266 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 ZNF823P16415 610 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 IGFBP3P17936 291 aaPredicted RBP5.77□□□□□ -1.49
USP28-202ENST00000535607 GABRG2P18507 467 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 GABRR1P24046 479 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 CRABP1P29762 137 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 FCGR2CP31995 323 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 HRH1P35367 487 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 CEACAM6P40199 344 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 MPLP40238 635 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 CDKN2AP42771 156 aaKnown RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms