RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 SERINC1Q9NRX5 453 aa7.08□□□□□ -1.28
NEDD8-207ENST00000533242 CENPMQ9NSP4 180 aa7.08□□□□□ -1.28
NEDD8-207ENST00000533242 OR52A1Q9UKL2 312 aa7.08□□□□□ -1.28
NEDD8-207ENST00000533242 R4GMQ9 66 aa7.08□□□□□ -1.28
NEDD8-207ENST00000533242 MALRD1Q5VYJ5 2156 aa7.08□□□□□ -1.28
NEDD8-207ENST00000533242 TMEM269A0A1B0GVZ9 245 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 VWC2LB2RUY7 222 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 M0QYG6 137 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 LDLRAD4O15165 306 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 PRAF2O60831 178 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 TMEM127O75204 238 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 TTRP02766 147 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 GTF2F2P13984 249 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 IGHV1-2P23083 117 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 PTAFRP25105 342 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 HTR2CP28335 458 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 CRABP1P29762 137 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 P2RY4P51582 365 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 P2RX3P56373 397 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 TSPAN5P62079 268 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 ZP4Q12836 540 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 GRK1Q15835 563 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 SLC22A6Q4U2R8 563 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 DMRTC1Q5HYR2 192 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 TMEM108Q6UXF1 575 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 CFAP77Q6ZQR2 320 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 IL17RELQ6ZVW7 336 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 ELMOD2Q8IZ81 293 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 MUC20Q8N307 709 aaPredicted RBP7.07□□□□□ -1.28
NEDD8-207ENST00000533242 OR13C3Q8NGS6 347 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 GPX8Q8TED1 209 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 TMEM234Q8WY98 164 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 ST8SIA1Q92185 356 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 SEH1LQ96EE3 360 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 ADAT3Q96EY9 351 aaPredicted RBP7.07□□□□□ -1.28
NEDD8-207ENST00000533242 CADP27708 2225 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 PLSCR5A0PG75 271 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 C5orf63A6NC05 138 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 OR5H1A6NKK0 313 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 ZNF724A8MTY0 619 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 RGS11O94810 467 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 RLN1P04808 185 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 ACSM4P0C7M7 580 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 CD37P11049 281 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 SLC2A1P11166 492 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 FSTP19883 344 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 PDLIM4P50479 330 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 SUMO3P55854 103 aaPredicted RBP7.07□□□□□ -1.28
NEDD8-207ENST00000533242 TMEM176BQ3YBM2 270 aaPredicted RBP7.07□□□□□ -1.28
NEDD8-207ENST00000533242 JAGN1Q8N5M9 183 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 OR4S1Q8NGB4 309 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 RNF133Q8WVZ7 376 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 SPACA5Q96QH8 159 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 MRPL13Q9BYD1 178 aaKnown RBP7.07□□□□□ -1.28
NEDD8-207ENST00000533242 TINAGL1Q9GZM7 467 aaPredicted RBP7.07□□□□□ -1.28
NEDD8-207ENST00000533242 CHODLQ9H9P2 273 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 FAM206AQ9NX38 181 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 ZNF319Q9P2F9 582 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 RABL2AQ9UBK7 228 aaPredicted RBP7.07□□□□□ -1.28
NEDD8-207ENST00000533242 RABL2BQ9UNT1 228 aa7.07□□□□□ -1.28
NEDD8-207ENST00000533242 TMEM235A6NFC5 223 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 NDUFS8O00217 210 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 ETV2O00321 342 aaPredicted RBP7.06□□□□□ -1.28
NEDD8-207ENST00000533242 SMAD9O15198 467 aaKnown RBP7.06□□□□□ -1.28
NEDD8-207ENST00000533242 CREBL2O60519 120 aaPredicted RBP7.06□□□□□ -1.28
NEDD8-207ENST00000533242 NOS1APO75052 506 aaPredicted RBP7.06□□□□□ -1.28
NEDD8-207ENST00000533242 OR2A4O95047 310 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 ZNF823P16415 610 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 CD40P25942 277 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 PRSS3P35030 304 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 APOBEC1P41238 236 aaKnown RBP7.06□□□□□ -1.28
NEDD8-207ENST00000533242 SCAND1P57086 179 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 RAC3P60763 192 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 PSMA6P60900 246 aaKnown RBP7.06□□□□□ -1.28
NEDD8-207ENST00000533242 UNC119Q13432 240 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 RBMS2Q15434 407 aaKnown RBP7.06□□□□□ -1.28
NEDD8-207ENST00000533242 CARD17Q5XLA6 110 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 SLC22A25Q6T423 547 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 C17orf107Q6ZR85 190 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 ZNF627Q7L945 461 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 PAQR4Q8N4S7 273 aaPredicted RBP7.06□□□□□ -1.28
NEDD8-207ENST00000533242 SPICQ8N5J4 248 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 UXS1Q8NBZ7 420 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 OR52N4Q8NGI2 321 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 FGGYQ96C11 551 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 OR2A7Q96R45 310 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 CNTD2Q9H8S5 307 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 DIABLOQ9NR28 239 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 B3GNT2Q9NY97 397 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 EMC3Q9P0I2 261 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 CYB5R1Q9UHQ9 305 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 HHLA2Q9UM44 414 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 LHFPL6Q9Y693 200 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 SPRY1O43609 319 aaPredicted RBP7.06□□□□□ -1.28
NEDD8-207ENST00000533242 TCF21O43680 179 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 TRAF3IP2O43734 574 aaPredicted RBP7.06□□□□□ -1.28
NEDD8-207ENST00000533242 CYTIPO60759 359 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 IL5P05113 134 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 ISG15P05161 165 aa7.06□□□□□ -1.28
NEDD8-207ENST00000533242 DAP3P51398 398 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms