RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 SYS1Q8N2H4 156 aa7.8□□□□□ -1.16
CTNND1-232ENST00000532649 KLHDC1Q8N7A1 406 aa7.8□□□□□ -1.16
CTNND1-232ENST00000532649 DUS4LO95620 317 aaKnown RBP7.8□□□□□ -1.16
CTNND1-232ENST00000532649 C1QAP02745 245 aa7.8□□□□□ -1.16
CTNND1-232ENST00000532649 SLC25A4P12235 298 aa7.8□□□□□ -1.16
CTNND1-232ENST00000532649 HTN1P15515 57 aa7.8□□□□□ -1.16
CTNND1-232ENST00000532649 RPS19P39019 145 aaKnown RBP7.8□□□□□ -1.16
CTNND1-232ENST00000532649 GPM6AP51674 278 aa7.8□□□□□ -1.16
CTNND1-232ENST00000532649 STARD6P59095 220 aa7.8□□□□□ -1.16
CTNND1-232ENST00000532649 APOBEC4Q8WW27 367 aaKnown RBP7.8□□□□□ -1.16
CTNND1-232ENST00000532649 PLA2G12AQ9BZM1 189 aa7.8□□□□□ -1.16
CTNND1-232ENST00000532649 ZNF385DQ9H6B1 395 aa7.8□□□□□ -1.16
CTNND1-232ENST00000532649 COA4Q9NYJ1 87 aa7.8□□□□□ -1.16
CTNND1-232ENST00000532649 ZNF391Q9UJN7 358 aa7.8□□□□□ -1.16
CTNND1-232ENST00000532649 C21orf140B9A014 251 aa7.8□□□□□ -1.16
CTNND1-232ENST00000532649 KIR2DS2P43631 304 aa7.8□□□□□ -1.16
CTNND1-232ENST00000532649 TAS2R60P59551 318 aa7.8□□□□□ -1.16
CTNND1-232ENST00000532649 RPL30P62888 115 aaKnown RBP7.8□□□□□ -1.16
CTNND1-232ENST00000532649 PAFAH1B2P68402 229 aa7.8□□□□□ -1.16
CTNND1-232ENST00000532649 PAX5Q02548 391 aa7.8□□□□□ -1.16
CTNND1-232ENST00000532649 STPG1Q5TH74 334 aa7.8□□□□□ -1.16
CTNND1-232ENST00000532649 LCN15Q6UWW0 184 aa7.8□□□□□ -1.16
CTNND1-232ENST00000532649 OR10D3Q8NH80 312 aa7.8□□□□□ -1.16
CTNND1-232ENST00000532649 DYNC2LI1Q8TCX1 351 aa7.8□□□□□ -1.16
CTNND1-232ENST00000532649 ZG16BQ96DA0 208 aa7.8□□□□□ -1.16
CTNND1-232ENST00000532649 SCN10AQ9Y5Y9 1956 aa7.8□□□□□ -1.16
CTNND1-232ENST00000532649 A0A1W2PPV9 198 aa7.8□□□□□ -1.16
CTNND1-232ENST00000532649 GCGP01275 180 aa7.8□□□□□ -1.16
CTNND1-232ENST00000532649 CD1BP29016 333 aa7.8□□□□□ -1.16
CTNND1-232ENST00000532649 ASCL1P50553 236 aa7.8□□□□□ -1.16
CTNND1-232ENST00000532649 SOX8P57073 446 aa7.8□□□□□ -1.16
CTNND1-232ENST00000532649 TPPP2P59282 170 aa7.8□□□□□ -1.16
CTNND1-232ENST00000532649 AQP6Q13520 282 aa7.8□□□□□ -1.16
CTNND1-232ENST00000532649 CEBPEQ15744 281 aa7.8□□□□□ -1.16
CTNND1-232ENST00000532649 GSG1Q2KHT4 349 aa7.8□□□□□ -1.16
CTNND1-232ENST00000532649 MSRB3Q8IXL7 192 aa7.8□□□□□ -1.16
CTNND1-232ENST00000532649 SLC22A18ASQ8N1D0 253 aa7.8□□□□□ -1.16
CTNND1-232ENST00000532649 OR1L4Q8NGR5 311 aa7.8□□□□□ -1.16
CTNND1-232ENST00000532649 OR5H6Q8NGV6 325 aa7.8□□□□□ -1.16
CTNND1-232ENST00000532649 CDCA4Q9BXL8 241 aa7.8□□□□□ -1.16
CTNND1-232ENST00000532649 GON7Q9BXV9 100 aa7.8□□□□□ -1.16
CTNND1-232ENST00000532649 SEBOXQ9HB31 216 aaPredicted RBP7.8□□□□□ -1.16
CTNND1-232ENST00000532649 OR5V1Q9UGF6 321 aa7.8□□□□□ -1.16
CTNND1-232ENST00000532649 C9orf172C9J069 976 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 JUNBP17275 347 aaPredicted RBP7.79□□□□□ -1.16
CTNND1-232ENST00000532649 PCMT1P22061 227 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 HAAOP46952 286 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 ERVFC1-1P60608 527 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 NHLH1Q02575 133 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 NHLH2Q02577 135 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 PRSS45Q7RTY3 260 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 DOLPP1Q86YN1 238 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 SIAH3Q8IW03 269 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 TMEM123Q8N131 208 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 PRR7Q8TB68 274 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 RPUSD4Q96CM3 377 aaKnown RBP7.79□□□□□ -1.16
CTNND1-232ENST00000532649 ASCC3Q8N3C0 2202 aaKnown RBP7.79□□□□□ -1.16
CTNND1-232ENST00000532649 TMEM30CPA0ZSE6 113 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 ZNF727A8MUV8 499 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 SRD5A2P31213 254 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 KRTDAPP60985 99 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 RANP62826 216 aaKnown RBP7.79□□□□□ -1.16
CTNND1-232ENST00000532649 PRDX4Q13162 271 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 MICBQ29980 383 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 TOR2AQ5JU69 321 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 MARC2Q969Z3 335 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 SMIM19Q96E16 107 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 RASL11BQ9BPW5 248 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 RNF167Q9H6Y7 350 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 UFC1Q9Y3C8 167 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 A0A1W2PR80 420 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 ZNF320A2RRD8 509 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 HSPB2A8KAH6 182 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 ZBTB25P24278 435 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 BRS3P32247 399 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 PPP1CCP36873 323 aaKnown RBP7.79□□□□□ -1.16
CTNND1-232ENST00000532649 RELAQ04206 551 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 HSPB2Q16082 182 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 CCDC190Q86UF4 302 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 OR8B3Q8NGG8 313 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 NUBPLQ8TB37 319 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 OR8B2Q96RD0 313 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 RASL10BQ96S79 203 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 K7ESF4 209 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 COX7A1P24310 79 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 ID1P41134 155 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 C21orf58P58505 322 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 CDK5R1Q15078 307 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 NRARPQ7Z6K4 114 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 RAB1CQ92928 201 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 NPAS1Q99742 590 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 ISG20L2Q9H9L3 353 aaKnown RBP7.79□□□□□ -1.16
CTNND1-232ENST00000532649 FBXO8Q9NRD0 319 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 SIRT3Q9NTG7 399 aaPredicted RBP7.79□□□□□ -1.16
CTNND1-232ENST00000532649 C20orf141Q9NUB4 165 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 NDUFB11Q9NX14 153 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 LSM2Q9Y333 95 aaKnown RBP7.79□□□□□ -1.16
CTNND1-232ENST00000532649 SIPA1L1O43166 1804 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 FAM24AA6NFZ4 105 aa7.79□□□□□ -1.16
CTNND1-232ENST00000532649 GREM1O60565 184 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms