RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 ACBD4Q8NC06 268 aa2.81□□□□□ -1.96
C11orf88-204ENST00000529661 ATP6V1C2Q8NEY4 427 aa2.81□□□□□ -1.96
C11orf88-204ENST00000529661 ZFAND1Q8TCF1 268 aa2.81□□□□□ -1.96
C11orf88-204ENST00000529661 DYNC2LI1Q8TCX1 351 aa2.81□□□□□ -1.96
C11orf88-204ENST00000529661 ESR2Q92731 530 aa2.81□□□□□ -1.96
C11orf88-204ENST00000529661 S100PBPQ96BU1 408 aa2.81□□□□□ -1.96
C11orf88-204ENST00000529661 DCPSQ96C86 337 aaKnown RBP2.81□□□□□ -1.96
C11orf88-204ENST00000529661 FLYWCH2Q96CP2 140 aaKnown RBP2.81□□□□□ -1.96
C11orf88-204ENST00000529661 SGTBQ96EQ0 304 aa2.81□□□□□ -1.96
C11orf88-204ENST00000529661 APOL4Q9BPW4 351 aa2.81□□□□□ -1.96
C11orf88-204ENST00000529661 DSN1Q9H410 356 aa2.81□□□□□ -1.96
C11orf88-204ENST00000529661 IFT46Q9NQC8 304 aa2.81□□□□□ -1.96
C11orf88-204ENST00000529661 DDX19AQ9NUU7 478 aaKnown RBP2.81□□□□□ -1.96
C11orf88-204ENST00000529661 TFR2Q9UP52 801 aa2.81□□□□□ -1.96
C11orf88-204ENST00000529661 ELP1O95163 1332 aa2.81□□□□□ -1.96
C11orf88-204ENST00000529661 PCDH11XQ9BZA7 1347 aa2.81□□□□□ -1.96
C11orf88-204ENST00000529661 PIKFYVEQ9Y2I7 2098 aa2.81□□□□□ -1.96
C11orf88-204ENST00000529661 IGHV3OR16-9A0A0B4J2B5 98 aa2.8□□□□□ -1.96
C11orf88-204ENST00000529661 A0A1W2PP18 115 aa2.8□□□□□ -1.96
C11orf88-204ENST00000529661 SLC5A10A0PJK1 596 aa2.8□□□□□ -1.96
C11orf88-204ENST00000529661 FTCDNL1E5RQL4 147 aa2.8□□□□□ -1.96
C11orf88-204ENST00000529661 GOLGA6L19H0YKK7 550 aa2.8□□□□□ -1.96
C11orf88-204ENST00000529661 SHOX2O60902 331 aaPredicted RBP2.8□□□□□ -1.96
C11orf88-204ENST00000529661 PSIP1O75475 530 aaKnown RBP2.8□□□□□ -1.96
C11orf88-204ENST00000529661 PSMG1O95456 288 aa2.8□□□□□ -1.96
C11orf88-204ENST00000529661 THRAP10827 490 aa2.8□□□□□ -1.96
C11orf88-204ENST00000529661 ZNF35P13682 527 aa2.8□□□□□ -1.96
C11orf88-204ENST00000529661 HIST1H1CP16403 213 aaKnown RBP2.8□□□□□ -1.96
C11orf88-204ENST00000529661 TCP1P17987 556 aaKnown RBP2.8□□□□□ -1.96
C11orf88-204ENST00000529661 RPA3P35244 121 aaPredicted RBP2.8□□□□□ -1.96
C11orf88-204ENST00000529661 COILP38432 576 aaPredicted RBP2.8□□□□□ -1.96
C11orf88-204ENST00000529661 STC1P52823 247 aa2.8□□□□□ -1.96
C11orf88-204ENST00000529661 CDKN2DP55273 166 aa2.8□□□□□ -1.96
C11orf88-204ENST00000529661 OR10A3P58181 314 aa2.8□□□□□ -1.96
C11orf88-204ENST00000529661 LOXL1Q08397 574 aaPredicted RBP2.8□□□□□ -1.96
C11orf88-204ENST00000529661 RAB31Q13636 194 aa2.8□□□□□ -1.96
C11orf88-204ENST00000529661 IMPG1Q17R60 797 aa2.8□□□□□ -1.96
C11orf88-204ENST00000529661 COX19Q49B96 90 aa2.8□□□□□ -1.96
C11orf88-204ENST00000529661 TCEAL5Q5H9L2 206 aa2.8□□□□□ -1.96
C11orf88-204ENST00000529661 EPGNQ6UW88 154 aa2.8□□□□□ -1.96
C11orf88-204ENST00000529661 DRAM2Q6UX65 266 aa2.8□□□□□ -1.96
C11orf88-204ENST00000529661 LRRC34Q8IZ02 419 aa2.8□□□□□ -1.96
C11orf88-204ENST00000529661 TMEM251Q8N6I4 163 aa2.8□□□□□ -1.96
C11orf88-204ENST00000529661 CYB561D1Q8N8Q1 229 aa2.8□□□□□ -1.96
C11orf88-204ENST00000529661 SYNPRQ8TBG9 265 aa2.8□□□□□ -1.96
C11orf88-204ENST00000529661 SFXN5Q8TD22 340 aa2.8□□□□□ -1.96
C11orf88-204ENST00000529661 TCEAL3Q969E4 200 aa2.8□□□□□ -1.96
C11orf88-204ENST00000529661 PTX4Q96A99 478 aa2.8□□□□□ -1.96
C11orf88-204ENST00000529661 PPWD1Q96BP3 646 aaKnown RBP2.8□□□□□ -1.96
C11orf88-204ENST00000529661 PPP1R14BQ96C90 147 aa2.8□□□□□ -1.96
C11orf88-204ENST00000529661 CMTM5Q96DZ9 223 aa2.8□□□□□ -1.96
C11orf88-204ENST00000529661 VAT1Q99536 393 aa2.8□□□□□ -1.96
C11orf88-204ENST00000529661 RBBP8Q99708 897 aa2.8□□□□□ -1.96
C11orf88-204ENST00000529661 GABRG3Q99928 467 aa2.8□□□□□ -1.96
C11orf88-204ENST00000529661 LCE3DQ9BYE3 92 aa2.8□□□□□ -1.96
C11orf88-204ENST00000529661 SAMD10Q9BYL1 202 aa2.8□□□□□ -1.96
C11orf88-204ENST00000529661 SLIRPQ9GZT3 109 aaKnown RBP2.8□□□□□ -1.96
C11orf88-204ENST00000529661 ZNF222Q9UK12 451 aa2.8□□□□□ -1.96
C11orf88-204ENST00000529661 SLC7A11Q9UPY5 501 aa2.8□□□□□ -1.96
C11orf88-204ENST00000529661 ZNF257Q9Y2Q1 563 aa2.8□□□□□ -1.96
C11orf88-204ENST00000529661 TBL2Q9Y4P3 447 aaKnown RBP2.8□□□□□ -1.96
C11orf88-204ENST00000529661 NACAE9PAV3 2078 aa2.8□□□□□ -1.96
C11orf88-204ENST00000529661 A0A1W2PRG6 482 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 OR6C70A6NIJ9 312 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 SLC16A4O15374 487 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 FGF16O43320 207 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 SYNGR1O43759 233 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 ENSAO43768 121 aaKnown RBP2.79□□□□□ -1.96
C11orf88-204ENST00000529661 UPK1BO75841 260 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 MPZL1O95297 269 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 SNAP29O95721 258 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 RAB36O95755 333 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 HLA-AP01891 365 aaKnown RBP2.79□□□□□ -1.96
C11orf88-204ENST00000529661 LIMS3P0CW19 117 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 LIMS4P0CW20 117 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 CD37P11049 281 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 MYL9P24844 172 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 GTF2H1P32780 548 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 EVI2BP34910 448 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 MYCNOSP40205 109 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 RPS9P46781 194 aaKnown RBP2.79□□□□□ -1.96
C11orf88-204ENST00000529661 GALR1P47211 349 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 CEBPGP53567 150 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 OR12D2P58182 307 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 RPL10AP62906 217 aaKnown RBP2.79□□□□□ -1.96
C11orf88-204ENST00000529661 SLC35A1P78382 337 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 KDSRQ06136 332 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 STX5Q13190 355 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 TOMM34Q15785 309 aaPredicted RBP2.79□□□□□ -1.96
C11orf88-204ENST00000529661 OR10J3Q5JRS4 329 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 HBMQ6B0K9 141 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 OR2T5Q6IEZ7 315 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 SPICQ8N5J4 248 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 C2orf73Q8N5S3 287 aaPredicted RBP2.79□□□□□ -1.96
C11orf88-204ENST00000529661 OR10G2Q8NGC3 310 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 OR4K2Q8NGD2 314 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 OR5L1Q8NGL2 311 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 OR2T29Q8NH02 315 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 OR10G6Q8NH81 332 aa2.79□□□□□ -1.96
C11orf88-204ENST00000529661 COQ8AQ8NI60 647 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms