RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 DTX2Q86UW9 622 aa20.92■□□□□ 0.94
LDLRAD3-203ENST00000528989 TGIF2LYQ8IUE0 185 aa20.92■□□□□ 0.94
LDLRAD3-203ENST00000528989 SLAMF9Q96A28 289 aa20.92■□□□□ 0.94
LDLRAD3-203ENST00000528989 ZNF488Q96MN9 340 aa20.92■□□□□ 0.94
LDLRAD3-203ENST00000528989 ELL3Q9HB65 397 aaPredicted RBP20.92■□□□□ 0.94
LDLRAD3-203ENST00000528989 MTCH1Q9NZJ7 389 aa20.92■□□□□ 0.94
LDLRAD3-203ENST00000528989 LRP5LA4QPB2 252 aa20.92■□□□□ 0.94
LDLRAD3-203ENST00000528989 F8VVB4 439 aa20.92■□□□□ 0.94
LDLRAD3-203ENST00000528989 F8VWA3 439 aa20.92■□□□□ 0.94
LDLRAD3-203ENST00000528989 NPBWR2P48146 333 aa20.92■□□□□ 0.94
LDLRAD3-203ENST00000528989 SLC22A6Q4U2R8 563 aa20.92■□□□□ 0.94
LDLRAD3-203ENST00000528989 AQP3Q92482 292 aa20.92■□□□□ 0.94
LDLRAD3-203ENST00000528989 FAM46BQ96A09 425 aa20.92■□□□□ 0.94
LDLRAD3-203ENST00000528989 TRAF4Q9BUZ4 470 aaPredicted RBP20.92■□□□□ 0.94
LDLRAD3-203ENST00000528989 IL19Q9UHD0 177 aa20.92■□□□□ 0.94
LDLRAD3-203ENST00000528989 A6NLC8 198 aa20.91■□□□□ 0.94
LDLRAD3-203ENST00000528989 TMEM210A6NLX4 147 aa20.91■□□□□ 0.94
LDLRAD3-203ENST00000528989 TMEM104Q8NE00 496 aa20.91■□□□□ 0.94
LDLRAD3-203ENST00000528989 TPD52L2O43399 206 aaKnown RBP20.9■□□□□ 0.94
LDLRAD3-203ENST00000528989 SFTPBP07988 381 aa20.9■□□□□ 0.94
LDLRAD3-203ENST00000528989 ADH4P08319 380 aa20.9■□□□□ 0.94
LDLRAD3-203ENST00000528989 VSIG8P0DPA2 414 aa20.9■□□□□ 0.94
LDLRAD3-203ENST00000528989 PMELP40967 661 aa20.9■□□□□ 0.94
LDLRAD3-203ENST00000528989 EFNB2P52799 333 aa20.9■□□□□ 0.94
LDLRAD3-203ENST00000528989 MOGAT3Q86VF5 341 aa20.9■□□□□ 0.94
LDLRAD3-203ENST00000528989 AP3S1Q92572 193 aa20.9■□□□□ 0.94
LDLRAD3-203ENST00000528989 CPNE2Q96FN4 548 aaPredicted RBP20.9■□□□□ 0.94
LDLRAD3-203ENST00000528989 LIME1Q9H400 295 aa20.9■□□□□ 0.94
LDLRAD3-203ENST00000528989 TMEM272A0A1B0GTI8 110 aa20.9■□□□□ 0.94
LDLRAD3-203ENST00000528989 RGS5O15539 181 aa20.9■□□□□ 0.94
LDLRAD3-203ENST00000528989 SRP9P49458 86 aaKnown RBP20.9■□□□□ 0.94
LDLRAD3-203ENST00000528989 GMFBP60983 142 aa20.9■□□□□ 0.94
LDLRAD3-203ENST00000528989 QRFPP83859 136 aa20.9■□□□□ 0.94
LDLRAD3-203ENST00000528989 NRGNQ92686 78 aa20.9■□□□□ 0.94
LDLRAD3-203ENST00000528989 GAL3ST1Q99999 423 aa20.9■□□□□ 0.94
LDLRAD3-203ENST00000528989 CACNG6Q9BXT2 260 aa20.9■□□□□ 0.94
LDLRAD3-203ENST00000528989 TLNRD1Q9H1K6 362 aa20.9■□□□□ 0.94
LDLRAD3-203ENST00000528989 BANF2Q9H503 90 aa20.9■□□□□ 0.94
LDLRAD3-203ENST00000528989 GCM1Q9NP62 436 aa20.9■□□□□ 0.94
LDLRAD3-203ENST00000528989 ABRACLQ9P1F3 81 aa20.9■□□□□ 0.94
LDLRAD3-203ENST00000528989 CHD3Q12873 2000 aaKnown RBP20.89■□□□□ 0.94
LDLRAD3-203ENST00000528989 AKR7A2O43488 359 aa20.89■□□□□ 0.93
LDLRAD3-203ENST00000528989 HPGDSO60760 199 aa20.89■□□□□ 0.93
LDLRAD3-203ENST00000528989 PTBP3O95758 552 aaKnown RBP20.89■□□□□ 0.93
LDLRAD3-203ENST00000528989 TNFSF4P23510 183 aa20.89■□□□□ 0.93
LDLRAD3-203ENST00000528989 MPZP25189 248 aa20.89■□□□□ 0.93
LDLRAD3-203ENST00000528989 UNC119Q13432 240 aa20.89■□□□□ 0.93
LDLRAD3-203ENST00000528989 SAMD12Q8N8I0 201 aa20.89■□□□□ 0.93
LDLRAD3-203ENST00000528989 KCTD12Q96CX2 325 aaKnown RBP20.89■□□□□ 0.93
LDLRAD3-203ENST00000528989 DIRC2Q96SL1 478 aa20.89■□□□□ 0.93
LDLRAD3-203ENST00000528989 S100A13Q99584 98 aa20.89■□□□□ 0.93
LDLRAD3-203ENST00000528989 SMURF1Q9HCE7 757 aa20.89■□□□□ 0.93
LDLRAD3-203ENST00000528989 DECR2Q9NUI1 292 aa20.89■□□□□ 0.93
LDLRAD3-203ENST00000528989 C1orf123Q9NWV4 160 aa20.89■□□□□ 0.93
LDLRAD3-203ENST00000528989 SPATA2Q9UM82 520 aa20.89■□□□□ 0.93
LDLRAD3-203ENST00000528989 A0A075B6Q4 140 aa20.88■□□□□ 0.93
LDLRAD3-203ENST00000528989 J3QT63 122 aa20.88■□□□□ 0.93
LDLRAD3-203ENST00000528989 CLPXO76031 633 aa20.88■□□□□ 0.93
LDLRAD3-203ENST00000528989 HPXP02790 462 aa20.88■□□□□ 0.93
LDLRAD3-203ENST00000528989 CD55P08174 381 aa20.88■□□□□ 0.93
LDLRAD3-203ENST00000528989 BCL3P20749 454 aa20.88■□□□□ 0.93
LDLRAD3-203ENST00000528989 SERPINA2P20848 420 aa20.88■□□□□ 0.93
LDLRAD3-203ENST00000528989 CDKN1AP38936 164 aa20.88■□□□□ 0.93
LDLRAD3-203ENST00000528989 WDR82Q6UXN9 313 aa20.88■□□□□ 0.93
LDLRAD3-203ENST00000528989 ASCL4Q6XD76 172 aa20.88■□□□□ 0.93
LDLRAD3-203ENST00000528989 BIVMQ86UB2 503 aa20.88■□□□□ 0.93
LDLRAD3-203ENST00000528989 TBC1D15Q8TC07 691 aa20.88■□□□□ 0.93
LDLRAD3-203ENST00000528989 MMP27Q9H306 513 aa20.88■□□□□ 0.93
LDLRAD3-203ENST00000528989 RBFOX1Q9NWB1 397 aaKnown RBP20.88■□□□□ 0.93
LDLRAD3-203ENST00000528989 CACNG2Q9Y698 323 aa20.88■□□□□ 0.93
LDLRAD3-203ENST00000528989 RAI1Q7Z5J4 1906 aaPredicted RBP20.88■□□□□ 0.93
LDLRAD3-203ENST00000528989 LDLRAD4O15165 306 aa20.88■□□□□ 0.93
LDLRAD3-203ENST00000528989 MZT1Q08AG7 82 aa20.88■□□□□ 0.93
LDLRAD3-203ENST00000528989 IL24Q13007 206 aa20.88■□□□□ 0.93
LDLRAD3-203ENST00000528989 RSU1Q15404 277 aa20.88■□□□□ 0.93
LDLRAD3-203ENST00000528989 FAM209AQ5JX71 171 aa20.88■□□□□ 0.93
LDLRAD3-203ENST00000528989 LAX1Q8IWV1 398 aa20.88■□□□□ 0.93
LDLRAD3-203ENST00000528989 CELF2-AS1Q8N7Q2 184 aa20.88■□□□□ 0.93
LDLRAD3-203ENST00000528989 DTX3Q8N9I9 347 aa20.88■□□□□ 0.93
LDLRAD3-203ENST00000528989 ACOT12Q8WYK0 555 aa20.88■□□□□ 0.93
LDLRAD3-203ENST00000528989 PKIBQ9C010 78 aa20.88■□□□□ 0.93
LDLRAD3-203ENST00000528989 MIXL1Q9H2W2 232 aa20.88■□□□□ 0.93
LDLRAD3-203ENST00000528989 SAP30LQ9HAJ7 183 aa20.88■□□□□ 0.93
LDLRAD3-203ENST00000528989 USF3Q68DE3 2245 aa20.87■□□□□ 0.93
LDLRAD3-203ENST00000528989 SPG11Q96JI7 2443 aa20.87■□□□□ 0.93
LDLRAD3-203ENST00000528989 hCG_1807616A0A1W2PRN6 198 aa20.87■□□□□ 0.93
LDLRAD3-203ENST00000528989 LY6HO94772 140 aa20.87■□□□□ 0.93
LDLRAD3-203ENST00000528989 HTR3BO95264 441 aa20.87■□□□□ 0.93
LDLRAD3-203ENST00000528989 BPNT1O95861 308 aa20.87■□□□□ 0.93
LDLRAD3-203ENST00000528989 PPOXP50336 477 aa20.87■□□□□ 0.93
LDLRAD3-203ENST00000528989 PXT1Q8NFP0 134 aa20.87■□□□□ 0.93
LDLRAD3-203ENST00000528989 SLC25A38Q96DW6 304 aa20.87■□□□□ 0.93
LDLRAD3-203ENST00000528989 METTL9Q9H1A3 318 aa20.87■□□□□ 0.93
LDLRAD3-203ENST00000528989 DCAF16Q9NXF7 216 aa20.87■□□□□ 0.93
LDLRAD3-203ENST00000528989 DSCAMO60469 2012 aa20.86■□□□□ 0.93
LDLRAD3-203ENST00000528989 CDC14BO60729 498 aa20.86■□□□□ 0.93
LDLRAD3-203ENST00000528989 CRTAPO75718 401 aaPredicted RBP20.86■□□□□ 0.93
LDLRAD3-203ENST00000528989 GATA4P43694 442 aa20.86■□□□□ 0.93
LDLRAD3-203ENST00000528989 ZNF787Q6DD87 383 aa20.86■□□□□ 0.93
LDLRAD3-203ENST00000528989 MKXQ8IYA7 352 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms