RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 MMP9P14780 707 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 ADRA2CP18825 462 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 PSMB1P20618 241 aaKnown RBP3.81□□□□□ -1.8
USP48-211ENST00000526044 MSR1P21757 451 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 GALP22466 123 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 IL32P24001 234 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 ARR3P36575 388 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 CDKN1AP38936 164 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 CD79BP40259 229 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 ASCL1P50553 236 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 HCCSP53701 268 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 PRRX1P54821 245 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 UBE2NP61088 152 aaKnown RBP3.81□□□□□ -1.8
USP48-211ENST00000526044 PCBD1P61457 104 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 RAB40BQ12829 278 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 TSC22D1Q15714 1073 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 GABRA6Q16445 453 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 SLC36A2Q495M3 483 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 TEX30Q5JUR7 227 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 LINC01590Q5TEZ4 76 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 LAIR2Q6ISS4 152 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 STAC2Q6ZMT1 411 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 BHLHA15Q7RTS1 189 aaPredicted RBP3.81□□□□□ -1.8
USP48-211ENST00000526044 SLC16A14Q7RTX9 510 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 SLC16A9Q7RTY1 509 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 DPPA2Q7Z7J5 298 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 P2RY8Q86VZ1 359 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 ERI1Q8IV48 349 aaKnown RBP3.81□□□□□ -1.8
USP48-211ENST00000526044 ZNF679Q8IYX0 411 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 ZNF786Q8N393 782 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 STX19Q8N4C7 294 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 SLC22A24Q8N4F4 322 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 RELL2Q8NC24 303 aaPredicted RBP3.81□□□□□ -1.8
USP48-211ENST00000526044 STEAP2Q8NFT2 490 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 SLC26A10Q8NG04 563 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 OR51G2Q8NGK0 314 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 OR1K1Q8NGR3 316 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 OR2AJ1Q8NGZ0 328 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 OR2T27Q8NH04 317 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 OR5R1Q8NH85 324 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 THEM6Q8WUY1 208 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 ITLN2Q8WWU7 325 aaPredicted RBP3.81□□□□□ -1.8
USP48-211ENST00000526044 GGHQ92820 318 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 RNASE6Q93091 150 aaKnown RBP3.81□□□□□ -1.8
USP48-211ENST00000526044 MYDGFQ969H8 173 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 SLAMF9Q96A28 289 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 MUCL1Q96DR8 90 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 ZMYND19Q96E35 227 aaPredicted RBP3.81□□□□□ -1.8
USP48-211ENST00000526044 TMEM80Q96HE8 168 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 SH3GL3Q99963 347 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 YIPF3Q9GZM5 350 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 WDR76Q9H967 626 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 CCNB1IP1Q9NPC3 277 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 POLE4Q9NR33 117 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 MRPL22Q9NWU5 206 aaKnown RBP3.81□□□□□ -1.8
USP48-211ENST00000526044 PSORS1C1Q9UIG5 152 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 EXOGQ9Y2C4 368 aaKnown RBP3.81□□□□□ -1.8
USP48-211ENST00000526044 OR2W1Q9Y3N9 320 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 TIMM10BQ9Y5J6 103 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 TMEM14AQ9Y6G1 99 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 NBEAQ8NFP9 2946 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 PIEZO2Q9H5I5 2752 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 ACACBO00763 2458 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 ALPK2Q86TB3 2170 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 INTS1Q8N201 2190 aaKnown RBP3.8□□□□□ -1.8
USP48-211ENST00000526044 HCFC1P51610 2035 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 CACNA1GO43497 2377 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 A0A087WYN8 130 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 IQCMA0A1B0GVH7 501 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 SERTM2A0A1B0GWG4 89 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 A0A1B0GWJ7 208 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 A0A1W2PR80 420 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 DAPL1A0PJW8 107 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 NKX2-6A6NCS4 301 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 EFCAB10A6NFE3 127 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 OR5H1A6NKK0 313 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 ZNF670-ZNF695F2Z2N8 137 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 SLC1A7O00341 560 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 PHYHO14832 338 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 SELENOFO60613 162 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 RAD51DO75771 328 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 UBL3O95164 117 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 PTHP01270 115 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 CDK1P06493 297 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 MRPL3P09001 348 aaKnown RBP3.8□□□□□ -1.8
USP48-211ENST00000526044 TACSTD2P09758 323 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 PATE4P0C8F1 98 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 CD79AP11912 226 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 B4GALT1P15291 398 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 CBR1P16152 277 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 ALOX5APP20292 161 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 COX5AP20674 150 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 CRHBPP24387 322 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 EEF1B2P24534 225 aaKnown RBP3.8□□□□□ -1.8
USP48-211ENST00000526044 DNASE1P24855 282 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 DCKP27707 260 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 UGT2B10P36537 528 aa3.8□□□□□ -1.8
USP48-211ENST00000526044 NAA10P41227 235 aaPredicted RBP3.8□□□□□ -1.8
USP48-211ENST00000526044 RPS27P42677 84 aaKnown RBP3.8□□□□□ -1.8
USP48-211ENST00000526044 ACTC1P68032 377 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms