RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 TBC1D15Q8TC07 691 aa13.41□□□□□ -0.26
TSPAN4-213ENST00000524895 AQP3Q92482 292 aa13.41□□□□□ -0.26
TSPAN4-213ENST00000524895 SLC25A28Q96A46 364 aa13.41□□□□□ -0.26
TSPAN4-213ENST00000524895 FAM3DQ96BQ1 224 aa13.41□□□□□ -0.26
TSPAN4-213ENST00000524895 KCTD12Q96CX2 325 aaKnown RBP13.41□□□□□ -0.26
TSPAN4-213ENST00000524895 MRI1Q9BV20 369 aa13.41□□□□□ -0.26
TSPAN4-213ENST00000524895 SLIRPQ9GZT3 109 aaKnown RBP13.41□□□□□ -0.26
TSPAN4-213ENST00000524895 TLNRD1Q9H1K6 362 aa13.41□□□□□ -0.26
TSPAN4-213ENST00000524895 SMURF1Q9HCE7 757 aa13.41□□□□□ -0.26
TSPAN4-213ENST00000524895 C1orf123Q9NWV4 160 aa13.41□□□□□ -0.26
TSPAN4-213ENST00000524895 A0A0B4J203 849 aa13.4□□□□□ -0.26
TSPAN4-213ENST00000524895 H7C417 338 aa13.4□□□□□ -0.26
TSPAN4-213ENST00000524895 SYNGR1O43759 233 aa13.4□□□□□ -0.26
TSPAN4-213ENST00000524895 BPNT1O95861 308 aa13.4□□□□□ -0.26
TSPAN4-213ENST00000524895 SNRPBP14678 240 aaKnown RBP13.4□□□□□ -0.26
TSPAN4-213ENST00000524895 CDKN1AP38936 164 aa13.4□□□□□ -0.26
TSPAN4-213ENST00000524895 RSU1Q15404 277 aa13.4□□□□□ -0.26
TSPAN4-213ENST00000524895 ZNF404Q494X3 552 aa13.4□□□□□ -0.26
TSPAN4-213ENST00000524895 ZNF787Q6DD87 383 aa13.4□□□□□ -0.26
TSPAN4-213ENST00000524895 HIST2H2BCQ6DN03 193 aa13.4□□□□□ -0.26
TSPAN4-213ENST00000524895 SAXO1Q8IYX7 474 aa13.4□□□□□ -0.26
TSPAN4-213ENST00000524895 PXT1Q8NFP0 134 aa13.4□□□□□ -0.26
TSPAN4-213ENST00000524895 OR51D1Q8NGF3 324 aa13.4□□□□□ -0.26
TSPAN4-213ENST00000524895 MCFD2Q8NI22 146 aa13.4□□□□□ -0.26
TSPAN4-213ENST00000524895 LGALS14Q8TCE9 139 aa13.4□□□□□ -0.26
TSPAN4-213ENST00000524895 ACOT12Q8WYK0 555 aa13.4□□□□□ -0.26
TSPAN4-213ENST00000524895 ERGIC1Q969X5 290 aa13.4□□□□□ -0.26
TSPAN4-213ENST00000524895 SLAMF9Q96A28 289 aa13.4□□□□□ -0.26
TSPAN4-213ENST00000524895 METTL9Q9H1A3 318 aa13.4□□□□□ -0.26
TSPAN4-213ENST00000524895 GCM1Q9NP62 436 aa13.4□□□□□ -0.26
TSPAN4-213ENST00000524895 PTTG2Q9NZH5 202 aa13.4□□□□□ -0.26
TSPAN4-213ENST00000524895 ABRACLQ9P1F3 81 aa13.4□□□□□ -0.26
TSPAN4-213ENST00000524895 GHRLQ9UBU3 117 aa13.4□□□□□ -0.26
TSPAN4-213ENST00000524895 PPP1R3CQ9UQK1 317 aa13.4□□□□□ -0.26
TSPAN4-213ENST00000524895 DCHS2Q6V1P9 2916 aa13.4□□□□□ -0.26
TSPAN4-213ENST00000524895 DOPEY2Q9Y3R5 2298 aa13.39□□□□□ -0.27
TSPAN4-213ENST00000524895 LRBAP50851 2863 aa13.39□□□□□ -0.27
TSPAN4-213ENST00000524895 TRAPPC2LH3BP13 241 aa13.39□□□□□ -0.27
TSPAN4-213ENST00000524895 RHBDL1O75783 438 aa13.39□□□□□ -0.27
TSPAN4-213ENST00000524895 CALCBP10092 127 aa13.39□□□□□ -0.27
TSPAN4-213ENST00000524895 SLC22A6Q4U2R8 563 aa13.39□□□□□ -0.27
TSPAN4-213ENST00000524895 MZT2AQ6P582 158 aa13.39□□□□□ -0.27
TSPAN4-213ENST00000524895 WDR82Q6UXN9 313 aa13.39□□□□□ -0.27
TSPAN4-213ENST00000524895 ZNF826PQ6ZT77 177 aa13.39□□□□□ -0.27
TSPAN4-213ENST00000524895 C1QL2Q7Z5L3 287 aa13.39□□□□□ -0.27
TSPAN4-213ENST00000524895 C11orf53Q8IXP5 236 aa13.39□□□□□ -0.27
TSPAN4-213ENST00000524895 OR11L1Q8NGX0 322 aa13.39□□□□□ -0.27
TSPAN4-213ENST00000524895 NEU4Q8WWR8 484 aaPredicted RBP13.39□□□□□ -0.27
TSPAN4-213ENST00000524895 HPS1Q92902 700 aa13.39□□□□□ -0.27
TSPAN4-213ENST00000524895 C6orf62Q9GZU0 229 aaPredicted RBP13.39□□□□□ -0.27
TSPAN4-213ENST00000524895 CST11Q9H112 138 aa13.39□□□□□ -0.27
TSPAN4-213ENST00000524895 KCNK15Q9H427 330 aa13.39□□□□□ -0.27
TSPAN4-213ENST00000524895 CXorf56Q9H5V9 222 aa13.39□□□□□ -0.27
TSPAN4-213ENST00000524895 COMMD3Q9UBI1 195 aa13.39□□□□□ -0.27
TSPAN4-213ENST00000524895 IGKV1-12A0A0C4DH73 117 aa13.38□□□□□ -0.27
TSPAN4-213ENST00000524895 LRRC30A6NM36 301 aa13.38□□□□□ -0.27
TSPAN4-213ENST00000524895 ZNF780AO75290 641 aaPredicted RBP13.38□□□□□ -0.27
TSPAN4-213ENST00000524895 CRTAPO75718 401 aaPredicted RBP13.38□□□□□ -0.27
TSPAN4-213ENST00000524895 PAHP00439 452 aa13.38□□□□□ -0.27
TSPAN4-213ENST00000524895 IGKV1D-12P01611 117 aa13.38□□□□□ -0.27
TSPAN4-213ENST00000524895 HPXP02790 462 aa13.38□□□□□ -0.27
TSPAN4-213ENST00000524895 CSTBP04080 98 aaKnown RBP13.38□□□□□ -0.27
TSPAN4-213ENST00000524895 IRF2P14316 349 aa13.38□□□□□ -0.27
TSPAN4-213ENST00000524895 SERPINA2P20848 420 aa13.38□□□□□ -0.27
TSPAN4-213ENST00000524895 SCAND1P57086 179 aa13.38□□□□□ -0.27
TSPAN4-213ENST00000524895 DYNC1I2Q13409 638 aaKnown RBP13.38□□□□□ -0.27
TSPAN4-213ENST00000524895 GPR176Q14439 515 aa13.38□□□□□ -0.27
TSPAN4-213ENST00000524895 C2orf76Q3KRA6 126 aa13.38□□□□□ -0.27
TSPAN4-213ENST00000524895 ASCL4Q6XD76 172 aa13.38□□□□□ -0.27
TSPAN4-213ENST00000524895 BATF2Q8N1L9 274 aa13.38□□□□□ -0.27
TSPAN4-213ENST00000524895 OR10K1Q8NGX5 313 aa13.38□□□□□ -0.27
TSPAN4-213ENST00000524895 LRRC29Q8WV35 223 aa13.38□□□□□ -0.27
TSPAN4-213ENST00000524895 FAM46BQ96A09 425 aa13.38□□□□□ -0.27
TSPAN4-213ENST00000524895 CEP19Q96LK0 163 aa13.38□□□□□ -0.27
TSPAN4-213ENST00000524895 C1orf147Q96MC9 270 aaPredicted RBP13.38□□□□□ -0.27
TSPAN4-213ENST00000524895 ZNF488Q96MN9 340 aa13.38□□□□□ -0.27
TSPAN4-213ENST00000524895 PCDHB16Q9NRJ7 776 aa13.38□□□□□ -0.27
TSPAN4-213ENST00000524895 IL36GQ9NZH8 169 aa13.38□□□□□ -0.27
TSPAN4-213ENST00000524895 MTCH1Q9NZJ7 389 aa13.38□□□□□ -0.27
TSPAN4-213ENST00000524895 OR5V1Q9UGF6 321 aa13.38□□□□□ -0.27
TSPAN4-213ENST00000524895 ETV7Q9Y603 341 aa13.38□□□□□ -0.27
TSPAN4-213ENST00000524895 A0A075B6Q4 140 aa13.37□□□□□ -0.27
TSPAN4-213ENST00000524895 IGHV1-69-2A0A0G2JMI3 117 aa13.37□□□□□ -0.27
TSPAN4-213ENST00000524895 TMEM272A0A1B0GTI8 110 aa13.37□□□□□ -0.27
TSPAN4-213ENST00000524895 RGS5O15539 181 aa13.37□□□□□ -0.27
TSPAN4-213ENST00000524895 CDC14BO60729 498 aa13.37□□□□□ -0.27
TSPAN4-213ENST00000524895 KDM4BO94953 1096 aa13.37□□□□□ -0.27
TSPAN4-213ENST00000524895 HTR3BO95264 441 aa13.37□□□□□ -0.27
TSPAN4-213ENST00000524895 PGA5P0DJD9 388 aa13.37□□□□□ -0.27
TSPAN4-213ENST00000524895 VSIG8P0DPA2 414 aa13.37□□□□□ -0.27
TSPAN4-213ENST00000524895 BCL3P20749 454 aa13.37□□□□□ -0.27
TSPAN4-213ENST00000524895 OR2W3Q7Z3T1 314 aa13.37□□□□□ -0.27
TSPAN4-213ENST00000524895 Q8IYB0 196 aa13.37□□□□□ -0.27
TSPAN4-213ENST00000524895 SAMD12Q8N8I0 201 aa13.37□□□□□ -0.27
TSPAN4-213ENST00000524895 POC1AQ8NBT0 407 aa13.37□□□□□ -0.27
TSPAN4-213ENST00000524895 OR10Z1Q8NGY1 313 aa13.37□□□□□ -0.27
TSPAN4-213ENST00000524895 KCNG3Q8TAE7 436 aa13.37□□□□□ -0.27
TSPAN4-213ENST00000524895 Q8TCH9 128 aa13.37□□□□□ -0.27
TSPAN4-213ENST00000524895 NXF2Q9GZY0 626 aaKnown RBP13.37□□□□□ -0.27
TSPAN4-213ENST00000524895 MMP27Q9H306 513 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms