RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-222ENST00000523555 ACTC1P68032 377 aa7.85□□□□□ -1.15
PABPC1-222ENST00000523555 ACTA1P68133 377 aa7.85□□□□□ -1.15
PABPC1-222ENST00000523555 GALEQ14376 348 aa7.85□□□□□ -1.15
PABPC1-222ENST00000523555 ATPAF1Q5TC12 328 aaPredicted RBP7.85□□□□□ -1.15
PABPC1-222ENST00000523555 XAF1Q6GPH4 301 aa7.85□□□□□ -1.15
PABPC1-222ENST00000523555 ACP7Q6ZNF0 438 aa7.85□□□□□ -1.15
PABPC1-222ENST00000523555 USP43Q70EL4 1123 aa7.85□□□□□ -1.15
PABPC1-222ENST00000523555 PDZD9Q8IXQ8 264 aa7.85□□□□□ -1.15
PABPC1-222ENST00000523555 CD177Q8N6Q3 437 aa7.85□□□□□ -1.15
PABPC1-222ENST00000523555 POC1AQ8NBT0 407 aa7.85□□□□□ -1.15
PABPC1-222ENST00000523555 LY6G5BQ8NDX9 201 aa7.85□□□□□ -1.15
PABPC1-222ENST00000523555 C12orf43Q96C57 262 aaKnown RBP7.85□□□□□ -1.15
PABPC1-222ENST00000523555 WDFY2Q96P53 400 aa7.85□□□□□ -1.15
PABPC1-222ENST00000523555 SUCNR1Q9BXA5 334 aa7.85□□□□□ -1.15
PABPC1-222ENST00000523555 CHST5Q9GZS9 411 aa7.85□□□□□ -1.15
PABPC1-222ENST00000523555 ERVK13-1Q9NX77 482 aa7.85□□□□□ -1.15
PABPC1-222ENST00000523555 NKX1-2Q9UD57 310 aaPredicted RBP7.85□□□□□ -1.15
PABPC1-222ENST00000523555 RPUSD1Q9UJJ7 312 aaKnown RBP7.85□□□□□ -1.15
PABPC1-222ENST00000523555 TENM1Q9UKZ4 2725 aa7.85□□□□□ -1.15
PABPC1-222ENST00000523555 A0A0A6YYJ9 748 aa7.84□□□□□ -1.15
PABPC1-222ENST00000523555 CENPVL3A0A0U1RRI6 287 aa7.84□□□□□ -1.15
PABPC1-222ENST00000523555 DNAJC9-AS1A6NH13 148 aa7.84□□□□□ -1.15
PABPC1-222ENST00000523555 RFPL4AA6NLU0 287 aa7.84□□□□□ -1.15
PABPC1-222ENST00000523555 OR4C45A6NMZ5 311 aa7.84□□□□□ -1.15
PABPC1-222ENST00000523555 RFPL4AL1F8VTS6 287 aa7.84□□□□□ -1.15
PABPC1-222ENST00000523555 SIGLEC5O15389 551 aa7.84□□□□□ -1.15
PABPC1-222ENST00000523555 TOX4O94842 621 aa7.84□□□□□ -1.15
PABPC1-222ENST00000523555 HTR1AP08908 422 aa7.84□□□□□ -1.15
PABPC1-222ENST00000523555 ACAA1P09110 424 aaPredicted RBP7.84□□□□□ -1.15
PABPC1-222ENST00000523555 GNAO1P09471 354 aa7.84□□□□□ -1.15
PABPC1-222ENST00000523555 UBCP0CG48 685 aaKnown RBP7.84□□□□□ -1.15
PABPC1-222ENST00000523555 LIMS3P0CW19 117 aa7.84□□□□□ -1.15
PABPC1-222ENST00000523555 LIMS4P0CW20 117 aa7.84□□□□□ -1.15
PABPC1-222ENST00000523555 MPZP25189 248 aa7.84□□□□□ -1.15
PABPC1-222ENST00000523555 GTF2A1P52655 376 aaPredicted RBP7.84□□□□□ -1.15
PABPC1-222ENST00000523555 UBA52P62987 128 aaKnown RBP7.84□□□□□ -1.15
PABPC1-222ENST00000523555 ADARB1P78563 741 aaKnown RBP7.84□□□□□ -1.15
PABPC1-222ENST00000523555 KLRD1Q13241 179 aa7.84□□□□□ -1.15
PABPC1-222ENST00000523555 ALKBH1Q13686 389 aaKnown RBP7.84□□□□□ -1.15
PABPC1-222ENST00000523555 DOC2BQ14184 412 aa7.84□□□□□ -1.15
PABPC1-222ENST00000523555 DEFB112Q30KQ8 113 aa7.84□□□□□ -1.15
PABPC1-222ENST00000523555 OGFRL1Q5TC84 451 aaPredicted RBP7.84□□□□□ -1.15
PABPC1-222ENST00000523555 CD276Q5ZPR3 534 aa7.84□□□□□ -1.15
PABPC1-222ENST00000523555 LAIR2Q6ISS4 152 aa7.84□□□□□ -1.15
PABPC1-222ENST00000523555 FDX2Q6P4F2 183 aa7.84□□□□□ -1.15
PABPC1-222ENST00000523555 CRIP3Q6Q6R5 217 aa7.84□□□□□ -1.15
PABPC1-222ENST00000523555 SLC36A1Q7Z2H8 476 aa7.84□□□□□ -1.15
PABPC1-222ENST00000523555 TEX29Q8N6K0 151 aa7.84□□□□□ -1.15
PABPC1-222ENST00000523555 Q8N7P7 452 aa7.84□□□□□ -1.15
PABPC1-222ENST00000523555 ZNF555Q8NEP9 628 aa7.84□□□□□ -1.15
PABPC1-222ENST00000523555 CYGBQ8WWM9 190 aa7.84□□□□□ -1.15
PABPC1-222ENST00000523555 H1FXQ92522 213 aaKnown RBP7.84□□□□□ -1.15
PABPC1-222ENST00000523555 LHX4Q969G2 390 aa7.84□□□□□ -1.15
PABPC1-222ENST00000523555 TMIGD2Q96BF3 282 aa7.84□□□□□ -1.15
PABPC1-222ENST00000523555 FGGYQ96C11 551 aa7.84□□□□□ -1.15
PABPC1-222ENST00000523555 NRIP2Q9BQI9 281 aa7.84□□□□□ -1.15
PABPC1-222ENST00000523555 DCTN5Q9BTE1 182 aa7.84□□□□□ -1.15
PABPC1-222ENST00000523555 MS4A7Q9GZW8 240 aaPredicted RBP7.84□□□□□ -1.15
PABPC1-222ENST00000523555 PLEKHA1Q9HB21 404 aa7.84□□□□□ -1.15
PABPC1-222ENST00000523555 HES4Q9HCC6 221 aa7.84□□□□□ -1.15
PABPC1-222ENST00000523555 MRPS18AQ9NVS2 196 aaKnown RBP7.84□□□□□ -1.15
PABPC1-222ENST00000523555 MTCH1Q9NZJ7 389 aa7.84□□□□□ -1.15
PABPC1-222ENST00000523555 IL36RNQ9UBH0 155 aa7.84□□□□□ -1.15
PABPC1-222ENST00000523555 SLC25A10Q9UBX3 287 aaPredicted RBP7.84□□□□□ -1.15
PABPC1-222ENST00000523555 NKX6-3A6NJ46 265 aa7.83□□□□□ -1.16
PABPC1-222ENST00000523555 CASQ2O14958 399 aaPredicted RBP7.83□□□□□ -1.16
PABPC1-222ENST00000523555 NDUFB3O43676 98 aa7.83□□□□□ -1.16
PABPC1-222ENST00000523555 MPZL2O60487 215 aa7.83□□□□□ -1.16
PABPC1-222ENST00000523555 LALBAP00709 142 aa7.83□□□□□ -1.16
PABPC1-222ENST00000523555 ISG15P05161 165 aa7.83□□□□□ -1.16
PABPC1-222ENST00000523555 CALCBP10092 127 aa7.83□□□□□ -1.16
PABPC1-222ENST00000523555 FPR2P25090 351 aa7.83□□□□□ -1.16
PABPC1-222ENST00000523555 ETV1P50549 477 aa7.83□□□□□ -1.16
PABPC1-222ENST00000523555 ERVFRD-1P60508 538 aa7.83□□□□□ -1.16
PABPC1-222ENST00000523555 ERVK11-1P61568 191 aa7.83□□□□□ -1.16
PABPC1-222ENST00000523555 IL13RA1P78552 427 aa7.83□□□□□ -1.16
PABPC1-222ENST00000523555 RAB40BQ12829 278 aa7.83□□□□□ -1.16
PABPC1-222ENST00000523555 OR2G6Q5TZ20 316 aa7.83□□□□□ -1.16
PABPC1-222ENST00000523555 ASPHD2Q6ICH7 369 aa7.83□□□□□ -1.16
PABPC1-222ENST00000523555 C9orf139Q6ZV77 190 aa7.83□□□□□ -1.16
PABPC1-222ENST00000523555 VMO1Q7Z5L0 202 aa7.83□□□□□ -1.16
PABPC1-222ENST00000523555 ZNF573Q86YE8 665 aa7.83□□□□□ -1.16
PABPC1-222ENST00000523555 PNKDQ8N490 385 aa7.83□□□□□ -1.16
PABPC1-222ENST00000523555 PNLDC1Q8NA58 520 aaKnown RBP7.83□□□□□ -1.16
PABPC1-222ENST00000523555 TMEM185AQ8NFB2 350 aa7.83□□□□□ -1.16
PABPC1-222ENST00000523555 ZNF671Q8TAW3 534 aa7.83□□□□□ -1.16
PABPC1-222ENST00000523555 RGP1Q92546 391 aaPredicted RBP7.83□□□□□ -1.16
PABPC1-222ENST00000523555 ITFG2Q969R8 447 aa7.83□□□□□ -1.16
PABPC1-222ENST00000523555 SLAMF9Q96A28 289 aa7.83□□□□□ -1.16
PABPC1-222ENST00000523555 RFT1Q96AA3 541 aa7.83□□□□□ -1.16
PABPC1-222ENST00000523555 Q96MT0 163 aa7.83□□□□□ -1.16
PABPC1-222ENST00000523555 RDH12Q96NR8 316 aa7.83□□□□□ -1.16
PABPC1-222ENST00000523555 SPACA5Q96QH8 159 aa7.83□□□□□ -1.16
PABPC1-222ENST00000523555 PDCD1LG2Q9BQ51 273 aa7.83□□□□□ -1.16
PABPC1-222ENST00000523555 ADI1Q9BV57 179 aa7.83□□□□□ -1.16
PABPC1-222ENST00000523555 DNTTIP1Q9H147 329 aa7.83□□□□□ -1.16
PABPC1-222ENST00000523555 CNTD2Q9H8S5 307 aa7.83□□□□□ -1.16
PABPC1-222ENST00000523555 FGF20Q9NP95 211 aaPredicted RBP7.83□□□□□ -1.16
PABPC1-222ENST00000523555 SIRT7Q9NRC8 400 aa7.83□□□□□ -1.16
PABPC1-222ENST00000523555 C19orf12Q9NSK7 152 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms