RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 DYNAPQ8N1N2 210 aa12.52□□□□□ -0.41
MRPS28-209ENST00000522987 SDSLQ96GA7 329 aa12.52□□□□□ -0.41
MRPS28-209ENST00000522987 OR5M11Q96RB7 305 aa12.52□□□□□ -0.41
MRPS28-209ENST00000522987 FAM234AQ9H0X4 552 aa12.52□□□□□ -0.41
MRPS28-209ENST00000522987 ZNF556Q9HAH1 456 aa12.52□□□□□ -0.41
MRPS28-209ENST00000522987 TVP23BQ9NYZ1 205 aa12.52□□□□□ -0.41
MRPS28-209ENST00000522987 NOTCH3Q9UM47 2321 aa12.52□□□□□ -0.41
MRPS28-209ENST00000522987 KIAA2026Q5HYC2 2103 aa12.52□□□□□ -0.41
MRPS28-209ENST00000522987 TRBV23-1A0A0A0MS06 115 aa12.51□□□□□ -0.41
MRPS28-209ENST00000522987 CCDC182A6NF36 153 aa12.51□□□□□ -0.41
MRPS28-209ENST00000522987 MTRF1O75570 445 aaKnown RBP12.51□□□□□ -0.41
MRPS28-209ENST00000522987 NRASP01111 189 aa12.51□□□□□ -0.41
MRPS28-209ENST00000522987 HMGN1P05114 100 aa12.51□□□□□ -0.41
MRPS28-209ENST00000522987 JUNBP17275 347 aaPredicted RBP12.51□□□□□ -0.41
MRPS28-209ENST00000522987 PRDX2P32119 198 aa12.51□□□□□ -0.41
MRPS28-209ENST00000522987 KIR2DS4P43632 304 aa12.51□□□□□ -0.41
MRPS28-209ENST00000522987 HAAOP46952 286 aa12.51□□□□□ -0.41
MRPS28-209ENST00000522987 LGALS4P56470 323 aa12.51□□□□□ -0.41
MRPS28-209ENST00000522987 RIPPLY1Q0D2K3 151 aa12.51□□□□□ -0.41
MRPS28-209ENST00000522987 SNAPC1Q16533 368 aa12.51□□□□□ -0.41
MRPS28-209ENST00000522987 ZNF684Q5T5D7 378 aa12.51□□□□□ -0.41
MRPS28-209ENST00000522987 CRIP3Q6Q6R5 217 aa12.51□□□□□ -0.41
MRPS28-209ENST00000522987 ASRGL1Q7L266 308 aa12.51□□□□□ -0.41
MRPS28-209ENST00000522987 POC1AQ8NBT0 407 aa12.51□□□□□ -0.41
MRPS28-209ENST00000522987 OR5A2Q8NGI9 324 aa12.51□□□□□ -0.41
MRPS28-209ENST00000522987 APOL4Q9BPW4 351 aa12.51□□□□□ -0.41
MRPS28-209ENST00000522987 THTPAQ9BU02 230 aa12.51□□□□□ -0.41
MRPS28-209ENST00000522987 C1orf21Q9H246 121 aa12.51□□□□□ -0.41
MRPS28-209ENST00000522987 A0A0U1RQV5 110 aa12.5□□□□□ -0.41
MRPS28-209ENST00000522987 OR5B21A6NL26 309 aa12.5□□□□□ -0.41
MRPS28-209ENST00000522987 SLC1A7O00341 560 aa12.5□□□□□ -0.41
MRPS28-209ENST00000522987 NXPH2O95156 264 aa12.5□□□□□ -0.41
MRPS28-209ENST00000522987 TTRP02766 147 aa12.5□□□□□ -0.41
MRPS28-209ENST00000522987 OPN1MWP04001 364 aa12.5□□□□□ -0.41
MRPS28-209ENST00000522987 OPN1MW2P0DN77 364 aa12.5□□□□□ -0.41
MRPS28-209ENST00000522987 OPN1MW3P0DN78 364 aa12.5□□□□□ -0.41
MRPS28-209ENST00000522987 T-ENOLP0DO92 83 aa12.5□□□□□ -0.41
MRPS28-209ENST00000522987 CD28P10747 220 aa12.5□□□□□ -0.41
MRPS28-209ENST00000522987 ODF4Q2M2E3 257 aa12.5□□□□□ -0.41
MRPS28-209ENST00000522987 SMIM21Q3B7S5 101 aa12.5□□□□□ -0.41
MRPS28-209ENST00000522987 OXLD1Q5BKU9 147 aa12.5□□□□□ -0.41
MRPS28-209ENST00000522987 SLC35D3Q5M8T2 416 aa12.5□□□□□ -0.41
MRPS28-209ENST00000522987 KCTD18Q6PI47 426 aaPredicted RBP12.5□□□□□ -0.41
MRPS28-209ENST00000522987 ANGPTL5Q86XS5 388 aa12.5□□□□□ -0.41
MRPS28-209ENST00000522987 ARHGAP24Q8N264 748 aa12.5□□□□□ -0.41
MRPS28-209ENST00000522987 C11orf42Q8N5U0 333 aa12.5□□□□□ -0.41
MRPS28-209ENST00000522987 TRMT10AQ8TBZ6 339 aaKnown RBP12.5□□□□□ -0.41
MRPS28-209ENST00000522987 PIFOQ8TCI5 191 aa12.5□□□□□ -0.41
MRPS28-209ENST00000522987 ASB9Q96DX5 294 aa12.5□□□□□ -0.41
MRPS28-209ENST00000522987 OR8B4Q96RC9 309 aa12.5□□□□□ -0.41
MRPS28-209ENST00000522987 MROQ9BYG7 248 aa12.5□□□□□ -0.41
MRPS28-209ENST00000522987 YIPF3Q9GZM5 350 aa12.5□□□□□ -0.41
MRPS28-209ENST00000522987 MEGF9Q9H1U4 602 aa12.5□□□□□ -0.41
MRPS28-209ENST00000522987 HEXA-AS1Q9H8Q6 139 aa12.5□□□□□ -0.41
MRPS28-209ENST00000522987 ENPP5Q9UJA9 477 aa12.5□□□□□ -0.41
MRPS28-209ENST00000522987 ARRDC5A6NEK1 342 aa12.49□□□□□ -0.41
MRPS28-209ENST00000522987 PGA5P0DJD9 388 aa12.49□□□□□ -0.41
MRPS28-209ENST00000522987 RIDAP52758 137 aaKnown RBP12.49□□□□□ -0.41
MRPS28-209ENST00000522987 SAMD5Q5TGI4 173 aa12.49□□□□□ -0.41
MRPS28-209ENST00000522987 CCBE1Q6UXH8 406 aaPredicted RBP12.49□□□□□ -0.41
MRPS28-209ENST00000522987 SPATA24Q86W54 205 aa12.49□□□□□ -0.41
MRPS28-209ENST00000522987 ASCC1Q8N9N2 400 aaKnown RBP12.49□□□□□ -0.41
MRPS28-209ENST00000522987 OR5K1Q8NHB7 308 aa12.49□□□□□ -0.41
MRPS28-209ENST00000522987 NPFFR1Q9GZQ6 430 aa12.49□□□□□ -0.41
MRPS28-209ENST00000522987 ZNF702PQ9H963 129 aa12.49□□□□□ -0.41
MRPS28-209ENST00000522987 LOC110117498-PIK3R3F6TDL0 507 aa12.48□□□□□ -0.41
MRPS28-209ENST00000522987 J3QT63 122 aa12.48□□□□□ -0.41
MRPS28-209ENST00000522987 PRKYO43930 277 aa12.48□□□□□ -0.41
MRPS28-209ENST00000522987 IGLV3-1P01715 115 aa12.48□□□□□ -0.41
MRPS28-209ENST00000522987 ARG1P05089 322 aa12.48□□□□□ -0.41
MRPS28-209ENST00000522987 CALB2P22676 271 aa12.48□□□□□ -0.41
MRPS28-209ENST00000522987 CBX1P83916 185 aa12.48□□□□□ -0.41
MRPS28-209ENST00000522987 ZNF829Q3KNS6 432 aaPredicted RBP12.48□□□□□ -0.41
MRPS28-209ENST00000522987 TMEM95Q3KNT9 176 aa12.48□□□□□ -0.41
MRPS28-209ENST00000522987 ARSJQ5FYB0 599 aaPredicted RBP12.48□□□□□ -0.41
MRPS28-209ENST00000522987 Q6ZPA2 131 aa12.48□□□□□ -0.41
MRPS28-209ENST00000522987 ZNF679Q8IYX0 411 aa12.48□□□□□ -0.41
MRPS28-209ENST00000522987 ZNF561Q8N587 486 aa12.48□□□□□ -0.41
MRPS28-209ENST00000522987 CFHR4Q92496 578 aa12.48□□□□□ -0.41
MRPS28-209ENST00000522987 MMP28Q9H239 520 aa12.48□□□□□ -0.41
MRPS28-209ENST00000522987 SLC25A19Q9HC21 320 aa12.48□□□□□ -0.41
MRPS28-209ENST00000522987 RASL12Q9NYN1 266 aa12.48□□□□□ -0.41
MRPS28-209ENST00000522987 USE1Q9NZ43 259 aa12.48□□□□□ -0.41
MRPS28-209ENST00000522987 NUFIP1Q9UHK0 495 aaKnown RBP12.48□□□□□ -0.41
MRPS28-209ENST00000522987 SLC22A13Q9Y226 551 aa12.48□□□□□ -0.41
MRPS28-209ENST00000522987 FAM230AA0A1W2PPH8 454 aa12.47□□□□□ -0.41
MRPS28-209ENST00000522987 A0A1W2PRX2 142 aa12.47□□□□□ -0.41
MRPS28-209ENST00000522987 ATP8B1O43520 1251 aa12.47□□□□□ -0.41
MRPS28-209ENST00000522987 FBXO24O75426 580 aa12.47□□□□□ -0.41
MRPS28-209ENST00000522987 DHRS3O75911 302 aa12.47□□□□□ -0.41
MRPS28-209ENST00000522987 RPP14O95059 124 aaKnown RBP12.47□□□□□ -0.41
MRPS28-209ENST00000522987 TK1P04183 234 aa12.47□□□□□ -0.41
MRPS28-209ENST00000522987 EDDM3BP56851 147 aa12.47□□□□□ -0.41
MRPS28-209ENST00000522987 CXCR4P61073 352 aa12.47□□□□□ -0.41
MRPS28-209ENST00000522987 COL10A1Q03692 680 aa12.47□□□□□ -0.41
MRPS28-209ENST00000522987 DYNC1I2Q13409 638 aaKnown RBP12.47□□□□□ -0.41
MRPS28-209ENST00000522987 SSX2Q16385 188 aa12.47□□□□□ -0.41
MRPS28-209ENST00000522987 CLVS2Q5SYC1 327 aa12.47□□□□□ -0.41
MRPS28-209ENST00000522987 LDLRAD2Q5SZI1 272 aa12.47□□□□□ -0.41
MRPS28-209ENST00000522987 BCL2L15Q5TBC7 163 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms