RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 KIR3DL2P43630 455 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 SLC11A1P49279 550 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 RPS14P62263 151 aaKnown RBP2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 ERVK-25P63136 954 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 FABP5Q01469 135 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 TNFRSF17Q02223 184 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 PAX2Q02962 417 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 EIF2B1Q14232 305 aaKnown RBP2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 IRF4Q15306 451 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 ZSWIM7Q19AV6 140 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 PYY3Q5JQD4 70 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 ANXA8L1Q5VT79 327 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 PTRHD1Q6GMV3 140 aaKnown RBP2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 NOXRED1Q6NXP6 359 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 C2orf66Q6UXQ4 117 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 ADAMTSL5Q6ZMM2 481 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 RASSF6Q6ZTQ3 369 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 LRRC70Q7Z2Q7 622 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 VTCN1Q7Z7D3 282 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 TMEM150AQ86TG1 271 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 SERPINA9Q86WD7 417 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 CBLN2Q8IUK8 224 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 ZNF584Q8IVC4 421 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 PDZD9Q8IXQ8 264 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 FTMTQ8N4E7 242 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 CD177Q8N6Q3 437 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 GPR26Q8NDV2 337 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR4A4PQ8NGN8 299 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR2T35Q8NGX2 323 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR51Q1Q8NH59 317 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR52J3Q8NH60 311 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR56B4Q8NH76 319 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR10J5Q8NHC4 309 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 ZNF671Q8TAW3 534 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 OSTF1Q92882 214 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 EXOSC8Q96B26 276 aaKnown RBP2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 TMEM186Q96B77 213 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 CXorf40BQ96DE9 158 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 RAB3CQ96E17 227 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 WDR34Q96EX3 536 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 KCTD7Q96MP8 289 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 ERMAPQ96PL5 475 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 MAPKAP1Q9BPZ7 522 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 SPXQ9BT56 116 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 SCRT1Q9BWW7 348 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 RSPO3Q9BXY4 272 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 ACTR6Q9GZN1 396 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 TLNRD1Q9H1K6 362 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 ABCG8Q9H221 673 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 ASB8Q9H765 288 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 TUBA4BQ9H853 241 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 PLEKHA1Q9HB21 404 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 FGF20Q9NP95 211 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 MYOZ1Q9NP98 299 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 CTPS2Q9NRF8 586 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 CA10Q9NS85 328 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 ACER3Q9NUN7 267 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 NUDT15Q9NV35 164 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 PISDQ9UG56 409 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 OPN4Q9UHM6 478 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 HS3ST2Q9Y278 367 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 POFUT2Q9Y2G5 429 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 NTNG1Q9Y2I2 539 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 YARS2Q9Y2Z4 477 aaKnown RBP2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 NUP210LQ5VU65 1888 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 MYO16Q9Y6X6 1858 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 TRBV7-9A0A0J9YWB2 115 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 FAM168BA1KXE4 195 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 TSPAN11A1L157 253 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 NCF1BA6NI72 391 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 IQCF5A8MTL0 148 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 A8MU10 97 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 NCF1CA8MVU1 366 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 SNRPGP15A8MWD9 76 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 KLLNB2CW77 178 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 IDSB3KWA1 339 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 TEX46H3BTG2 121 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 H7C417 338 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 J3QRE1 110 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 M0R129 80 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 GNGT2O14610 69 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 PRRG1O14668 218 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 IMPA2O14732 288 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR2T1O43869 369 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 PRKYO43930 277 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 LCMT2O60294 686 aaKnown RBP2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 SLC19A2O60779 497 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 TBL1XO60907 577 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 ENTPD6O75354 484 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 RDH16O75452 317 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 DIRAS1O95057 198 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 IGSF6O95976 241 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 ACTL6AO96019 429 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 IGF2P01344 180 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 CD8AP01732 235 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 FABP3P05413 133 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 HEXBP07686 556 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 WNT2P09544 360 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 CT45A10P0DMU9 189 aa2.44□□□□□ -2.02
HMGB1P41-201ENST00000520234 ANXA8P13928 327 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms