RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 CPMP14384 443 aa11.92□□□□□ -0.5
PABPC1-208ENST00000519004 UCP3P55916 312 aa11.92□□□□□ -0.5
PABPC1-208ENST00000519004 RAB11AP62491 216 aa11.92□□□□□ -0.5
PABPC1-208ENST00000519004 ROM1Q03395 351 aa11.92□□□□□ -0.5
PABPC1-208ENST00000519004 EXOSC7Q15024 291 aaKnown RBP11.92□□□□□ -0.5
PABPC1-208ENST00000519004 PRSS8Q16651 343 aa11.92□□□□□ -0.5
PABPC1-208ENST00000519004 TDRG1Q3Y452 100 aa11.92□□□□□ -0.5
PABPC1-208ENST00000519004 P4HA3Q7Z4N8 544 aa11.92□□□□□ -0.5
PABPC1-208ENST00000519004 OR14L1PQ8NHC6 308 aa11.92□□□□□ -0.5
PABPC1-208ENST00000519004 SDSLQ96GA7 329 aa11.92□□□□□ -0.5
PABPC1-208ENST00000519004 GRHPRQ9UBQ7 328 aa11.92□□□□□ -0.5
PABPC1-208ENST00000519004 C14orf166Q9Y224 244 aaKnown RBP11.92□□□□□ -0.5
PABPC1-208ENST00000519004 KIF26BQ2KJY2 2108 aa11.92□□□□□ -0.5
PABPC1-208ENST00000519004 CHD3Q12873 2000 aaKnown RBP11.92□□□□□ -0.5
PABPC1-208ENST00000519004 SCN10AQ9Y5Y9 1956 aa11.92□□□□□ -0.5
PABPC1-208ENST00000519004 FAM230AA0A1W2PPH8 454 aa11.92□□□□□ -0.5
PABPC1-208ENST00000519004 SOCS1O15524 211 aa11.92□□□□□ -0.5
PABPC1-208ENST00000519004 SRSF10O75494 262 aaKnown RBP11.92□□□□□ -0.5
PABPC1-208ENST00000519004 HIST1H1DP16402 221 aaKnown RBP11.92□□□□□ -0.5
PABPC1-208ENST00000519004 GRK6P43250 576 aa11.92□□□□□ -0.5
PABPC1-208ENST00000519004 ACTL10Q5JWF8 245 aa11.92□□□□□ -0.5
PABPC1-208ENST00000519004 C1orf140Q5VVS0 124 aa11.92□□□□□ -0.5
PABPC1-208ENST00000519004 AMZ2Q86W34 360 aa11.92□□□□□ -0.5
PABPC1-208ENST00000519004 OR1L6Q8NGR2 347 aa11.92□□□□□ -0.5
PABPC1-208ENST00000519004 SPPL3Q8TCT6 385 aa11.92□□□□□ -0.5
PABPC1-208ENST00000519004 TMEM37Q8WXS4 190 aa11.92□□□□□ -0.5
PABPC1-208ENST00000519004 RBMXL1Q96E39 390 aaKnown RBP11.92□□□□□ -0.5
PABPC1-208ENST00000519004 SLC35E1Q96K37 410 aa11.92□□□□□ -0.5
PABPC1-208ENST00000519004 GPR84Q9NQS5 396 aa11.92□□□□□ -0.5
PABPC1-208ENST00000519004 EHFQ9NZC4 300 aa11.92□□□□□ -0.5
PABPC1-208ENST00000519004 LSM7Q9UK45 103 aaKnown RBP11.92□□□□□ -0.5
PABPC1-208ENST00000519004 LRP12Q9Y561 859 aa11.92□□□□□ -0.5
PABPC1-208ENST00000519004 SCN3AQ9NY46 2000 aa11.92□□□□□ -0.5
PABPC1-208ENST00000519004 GOLGA4Q13439 2230 aaKnown RBP11.92□□□□□ -0.5
PABPC1-208ENST00000519004 HCRTR2O43614 444 aa11.91□□□□□ -0.5
PABPC1-208ENST00000519004 APBA3O96018 575 aa11.91□□□□□ -0.5
PABPC1-208ENST00000519004 RENP00797 406 aa11.91□□□□□ -0.5
PABPC1-208ENST00000519004 PPBPP02775 128 aa11.91□□□□□ -0.5
PABPC1-208ENST00000519004 GALNSP34059 522 aa11.91□□□□□ -0.5
PABPC1-208ENST00000519004 CDK3Q00526 305 aa11.91□□□□□ -0.5
PABPC1-208ENST00000519004 ZNF74Q16587 644 aa11.91□□□□□ -0.5
PABPC1-208ENST00000519004 SLC8B1Q6J4K2 584 aa11.91□□□□□ -0.5
PABPC1-208ENST00000519004 SLC18B1Q6NT16 456 aa11.91□□□□□ -0.5
PABPC1-208ENST00000519004 SLC24A5Q71RS6 500 aa11.91□□□□□ -0.5
PABPC1-208ENST00000519004 LYG1Q8N1E2 194 aa11.91□□□□□ -0.5
PABPC1-208ENST00000519004 C8orf44Q96CB5 159 aa11.91□□□□□ -0.5
PABPC1-208ENST00000519004 GLRX2Q9NS18 164 aa11.91□□□□□ -0.5
PABPC1-208ENST00000519004 FBLN5Q9UBX5 448 aa11.91□□□□□ -0.5
PABPC1-208ENST00000519004 FUT9Q9Y231 359 aa11.91□□□□□ -0.5
PABPC1-208ENST00000519004 SCDO00767 359 aa11.91□□□□□ -0.5
PABPC1-208ENST00000519004 SPINT1O43278 529 aa11.91□□□□□ -0.5
PABPC1-208ENST00000519004 YPEL1O60688 119 aa11.91□□□□□ -0.5
PABPC1-208ENST00000519004 HSD11B1P28845 292 aa11.91□□□□□ -0.5
PABPC1-208ENST00000519004 TMEM50BP56557 158 aa11.91□□□□□ -0.5
PABPC1-208ENST00000519004 ERVS71-1P61550 626 aa11.91□□□□□ -0.5
PABPC1-208ENST00000519004 EWSR1Q01844 656 aaKnown RBP eCLIP11.91□□□□□ -0.5
PABPC1-208ENST00000519004 ZP2Q05996 745 aa11.91□□□□□ -0.5
PABPC1-208ENST00000519004 RNF151Q2KHN1 245 aa11.91□□□□□ -0.5
PABPC1-208ENST00000519004 TEX43Q6ZNM6 134 aa11.91□□□□□ -0.5
PABPC1-208ENST00000519004 TMEM123Q8N131 208 aa11.91□□□□□ -0.5
PABPC1-208ENST00000519004 SLC24A4Q8NFF2 622 aa11.91□□□□□ -0.5
PABPC1-208ENST00000519004 ZCCHC14Q8WYQ9 949 aaKnown RBP11.91□□□□□ -0.5
PABPC1-208ENST00000519004 YPEL2Q96QA6 119 aa11.91□□□□□ -0.5
PABPC1-208ENST00000519004 MRPL22Q9NWU5 206 aaKnown RBP11.91□□□□□ -0.5
PABPC1-208ENST00000519004 RNF150Q9ULK6 438 aa11.91□□□□□ -0.5
PABPC1-208ENST00000519004 Q9Y3F1 56 aa11.91□□□□□ -0.5
PABPC1-208ENST00000519004 LRRK1Q38SD2 2015 aa11.9□□□□□ -0.5
PABPC1-208ENST00000519004 LOC105371242A0A075B767 164 aa11.9□□□□□ -0.5
PABPC1-208ENST00000519004 LOC101059948A0A1B0GTJ6 334 aa11.9□□□□□ -0.5
PABPC1-208ENST00000519004 CNOT4O95628 575 aaKnown RBP11.9□□□□□ -0.5
PABPC1-208ENST00000519004 IGKV1D-16P01601 117 aa11.9□□□□□ -0.5
PABPC1-208ENST00000519004 HLA-DQA2P01906 255 aa11.9□□□□□ -0.5
PABPC1-208ENST00000519004 DBHP09172 617 aa11.9□□□□□ -0.5
PABPC1-208ENST00000519004 TUBG1P23258 451 aa11.9□□□□□ -0.5
PABPC1-208ENST00000519004 GATMP50440 423 aa11.9□□□□□ -0.5
PABPC1-208ENST00000519004 PSG6Q00889 435 aa11.9□□□□□ -0.5
PABPC1-208ENST00000519004 IL13RA2Q14627 380 aa11.9□□□□□ -0.5
PABPC1-208ENST00000519004 SHHQ15465 462 aa11.9□□□□□ -0.5
PABPC1-208ENST00000519004 CCL14Q16627 93 aa11.9□□□□□ -0.5
PABPC1-208ENST00000519004 EMC4Q5J8M3 183 aa11.9□□□□□ -0.5
PABPC1-208ENST00000519004 PARS2Q7L3T8 475 aaKnown RBP11.9□□□□□ -0.5
PABPC1-208ENST00000519004 SLC22A24Q8N4F4 322 aa11.9□□□□□ -0.5
PABPC1-208ENST00000519004 C10orf53Q8N6V4 93 aa11.9□□□□□ -0.5
PABPC1-208ENST00000519004 ORAOV1Q8WV07 137 aa11.9□□□□□ -0.5
PABPC1-208ENST00000519004 ZNF2Q9BSG1 426 aaPredicted RBP11.9□□□□□ -0.5
PABPC1-208ENST00000519004 TMEM74BQ9NUR3 256 aa11.9□□□□□ -0.5
PABPC1-208ENST00000519004 EMC9Q9Y3B6 208 aa11.9□□□□□ -0.5
PABPC1-208ENST00000519004 RNF115Q9Y4L5 304 aa11.9□□□□□ -0.5
PABPC1-208ENST00000519004 PPIAL4AQ9Y536 164 aa11.9□□□□□ -0.5
PABPC1-208ENST00000519004 CRYM-AS1A6NIL9 109 aa11.9□□□□□ -0.5
PABPC1-208ENST00000519004 RAC2P15153 192 aa11.9□□□□□ -0.5
PABPC1-208ENST00000519004 CARD18P57730 90 aa11.9□□□□□ -0.5
PABPC1-208ENST00000519004 FAM3BP58499 235 aaPredicted RBP11.9□□□□□ -0.5
PABPC1-208ENST00000519004 HIST1H3AP68431 136 aa11.9□□□□□ -0.5
PABPC1-208ENST00000519004 FOXK1P85037 733 aa11.9□□□□□ -0.5
PABPC1-208ENST00000519004 RPL18Q07020 188 aaKnown RBP11.9□□□□□ -0.5
PABPC1-208ENST00000519004 RTL6Q6ICC9 239 aa11.9□□□□□ -0.5
PABPC1-208ENST00000519004 C16orf82Q7Z2V1 217 aa11.9□□□□□ -0.5
PABPC1-208ENST00000519004 RNF144BQ7Z419 303 aa11.9□□□□□ -0.5
PABPC1-208ENST00000519004 FBXL14Q8N1E6 418 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms