RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 MEIOCA2RUB1 952 aa6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 TMEM235A6NFC5 223 aa6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 FAM90A27PA6NNH2 459 aa6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 H7C417 338 aa6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 SOCS1O15524 211 aa6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 ORC5O43913 435 aa6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 SSX4O60224 188 aa6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 LPLP06858 475 aa6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 THBDP07204 575 aa6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 GSTP1P09211 210 aaKnown RBP6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 SPNP16150 400 aa6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 KITLGP21583 273 aa6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 HAAOP46952 286 aa6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 RFX2P48378 723 aa6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 SRP9P49458 86 aaKnown RBP6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 ACTBP60709 375 aa6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 ACTG1P63261 375 aa6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 ADORA2A-AS1P86434 159 aa6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 GUCA2AQ02747 115 aa6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 SSBP1Q04837 148 aaKnown RBP6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 KLF9Q13886 244 aaPredicted RBP6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 ARL6IP1Q15041 203 aa6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 OR8G1Q15617 311 aa6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 ALKBH6Q3KRA9 238 aa6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 ZNF260Q3ZCT1 412 aa6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 FBXL19-AS1Q494R0 122 aa6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 CDNFQ49AH0 187 aa6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 DNM1P46Q6ZS02 220 aa6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 Q6ZTK2 550 aa6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 C22orf34Q6ZV56 151 aa6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 SLC25A26Q70HW3 274 aa6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 TMEM200AQ86VY9 491 aa6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 MKXQ8IYA7 352 aa6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 OR8G5Q8NG78 346 aa6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 GPX8Q8TED1 209 aa6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 AQP3Q92482 292 aa6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 RNASE6Q93091 150 aaKnown RBP6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 RAB3CQ96E17 227 aa6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 RADILQ96JH8 1075 aa6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 ZMAT3Q9HA38 289 aaKnown RBP6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 RBFOX1Q9NWB1 397 aaKnown RBP6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 NKIRAS2Q9NYR9 191 aa6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 TAS2R8Q9NYW2 309 aa6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 KLK11Q9UBX7 282 aa6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 MTFP1Q9UDX5 166 aa6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 ERRFI1Q9UJM3 462 aaPredicted RBP6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 DIDO1Q9BTC0 2240 aaKnown RBP6.53□□□□□ -1.36
SCARNA20.1-201ENST00000516009 IGKV1-12A0A0C4DH73 117 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 ANKRD20A5PA0PJZ0 165 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 LRP5LA4QPB2 252 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 WIPF3A6NGB9 483 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 TMEM210A6NLX4 147 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 ATP6V1G2-DDX39BF2Z307 99 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 TRAPPC2LH3BP13 241 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 J3QT63 122 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 IGKV1D-12P01611 117 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 IGHV3-13P01766 116 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 SFTPBP07988 381 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 MELTFP08582 738 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 CSF1P09603 554 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 ZNF250P15622 560 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 HIST1H1DP16402 221 aaKnown RBP6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 GNB3P16520 340 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 GABRR1P24046 479 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 BLVRBP30043 206 aaPredicted RBP6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 FAUP35544 74 aaKnown RBP6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 KLF3P57682 345 aaPredicted RBP6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 GNG2P59768 71 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 SELENOVP59797 346 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 NKX6-1P78426 367 aaPredicted RBP6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 MZT1Q08AG7 82 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 DYRK1AQ13627 763 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 PNLIPRP3Q17RR3 467 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 PCGF3Q3KNV8 242 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 TMEM255AQ5JRV8 349 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 HAGHLQ6PII5 290 aaPredicted RBP6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 VHLLQ6RSH7 139 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 FBXL14Q8N1E6 418 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 OSR2Q8N2R0 312 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 PIAS4Q8N2W9 510 aaPredicted RBP6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 SPERTQ8NA61 448 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 OR13G1Q8NGZ3 307 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 LILRB4Q8NHJ6 448 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 CA5BP1Q8WTZ4 195 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 SLAMF9Q96A28 289 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 SEH1LQ96EE3 360 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 POM121Q96HA1 1249 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 ARHGAP5-AS1Q96IT6 56 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 Q96M66 194 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 WFIKKN1Q96NZ8 548 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 PKIBQ9C010 78 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 OR51I2Q9H344 312 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 KCNJ16Q9NPI9 418 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 FAIMQ9NVQ4 179 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 NDRG3Q9UGV2 375 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 DUSP13Q9UII6 198 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 FZR1Q9UM11 496 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 NBASA2RRP1 2371 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 HCFC1P51610 2035 aa6.52□□□□□ -1.37
SCARNA20.1-201ENST00000516009 USP24Q9UPU5 2620 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms