RNA–Protein interactions for RNA: ENST00000512820.5

LIMCH1-216, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMCH1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-216ENST00000512820 IL22RA1Q8N6P7 574 aa7.44□□□□□ -1.22
LIMCH1-216ENST00000512820 OR56B2PQ8NGI1 322 aa7.44□□□□□ -1.22
LIMCH1-216ENST00000512820 AQP3Q92482 292 aa7.44□□□□□ -1.22
LIMCH1-216ENST00000512820 SSX3Q99909 188 aa7.44□□□□□ -1.22
LIMCH1-216ENST00000512820 SLC35B3Q9H1N7 401 aa7.44□□□□□ -1.22
LIMCH1-216ENST00000512820 PLEKHF2Q9H8W4 249 aa7.44□□□□□ -1.22
LIMCH1-216ENST00000512820 VWA8A3KMH1 1905 aa7.44□□□□□ -1.22
LIMCH1-216ENST00000512820 A0A1W2PPV4 95 aa7.44□□□□□ -1.22
LIMCH1-216ENST00000512820 RNF212BA8MTL3 300 aa7.44□□□□□ -1.22
LIMCH1-216ENST00000512820 ZNF705FA8MVS1 300 aaPredicted RBP7.44□□□□□ -1.22
LIMCH1-216ENST00000512820 ZNF587BE7ETH6 402 aa7.44□□□□□ -1.22
LIMCH1-216ENST00000512820 NPIPB9F8W1W9 429 aa7.44□□□□□ -1.22
LIMCH1-216ENST00000512820 ZNF705DP0CH99 300 aaPredicted RBP7.44□□□□□ -1.22
LIMCH1-216ENST00000512820 ZNF705BP0CI00 300 aaPredicted RBP7.44□□□□□ -1.22
LIMCH1-216ENST00000512820 NFYBP25208 207 aa7.44□□□□□ -1.22
LIMCH1-216ENST00000512820 MECP2P51608 486 aaKnown RBP7.44□□□□□ -1.22
LIMCH1-216ENST00000512820 FUT6P51993 359 aa7.44□□□□□ -1.22
LIMCH1-216ENST00000512820 FDX2Q6P4F2 183 aa7.44□□□□□ -1.22
LIMCH1-216ENST00000512820 OR1F12Q8NHA8 337 aa7.44□□□□□ -1.22
LIMCH1-216ENST00000512820 RDH5Q92781 318 aa7.44□□□□□ -1.22
LIMCH1-216ENST00000512820 ISOC2Q96AB3 205 aa7.44□□□□□ -1.22
LIMCH1-216ENST00000512820 ALKBH3Q96Q83 286 aaPredicted RBP7.44□□□□□ -1.22
LIMCH1-216ENST00000512820 ONECUT2O95948 504 aa7.44□□□□□ -1.22
LIMCH1-216ENST00000512820 FABP1P07148 127 aa7.44□□□□□ -1.22
LIMCH1-216ENST00000512820 FUT3P21217 361 aa7.44□□□□□ -1.22
LIMCH1-216ENST00000512820 RRADP55042 308 aa7.44□□□□□ -1.22
LIMCH1-216ENST00000512820 AWAT1Q58HT5 328 aa7.44□□□□□ -1.22
LIMCH1-216ENST00000512820 OR8G2PQ6IF36 304 aa7.44□□□□□ -1.22
LIMCH1-216ENST00000512820 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.44□□□□□ -1.22
LIMCH1-216ENST00000512820 HOGA1Q86XE5 327 aa7.44□□□□□ -1.22
LIMCH1-216ENST00000512820 FAM185AQ8N0U4 392 aa7.44□□□□□ -1.22
LIMCH1-216ENST00000512820 TMEM104Q8NE00 496 aa7.44□□□□□ -1.22
LIMCH1-216ENST00000512820 RAB39BQ96DA2 213 aa7.44□□□□□ -1.22
LIMCH1-216ENST00000512820 GNRHR2Q96P88 292 aa7.44□□□□□ -1.22
LIMCH1-216ENST00000512820 OR5AC2Q9NZP5 309 aa7.44□□□□□ -1.22
LIMCH1-216ENST00000512820 GAB2Q9UQC2 676 aa7.44□□□□□ -1.22
LIMCH1-216ENST00000512820 TMED3Q9Y3Q3 217 aa7.44□□□□□ -1.22
LIMCH1-216ENST00000512820 TRAV20A0A0B4J274 112 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 IGHV1OR15-9A0A0B4J2B8 117 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 DAOP14920 347 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 ARF1P84077 181 aaKnown RBP7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 DHODHQ02127 395 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 DRAM2Q6UX65 266 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 MRPL41Q8IXM3 137 aaKnown RBP7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 FGF11Q92914 225 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 MRPL24Q96A35 216 aaKnown RBP7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 CRLF2Q9HC73 371 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 ANXA10Q9UJ72 324 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 AMDHD2Q9Y303 409 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 MMP24Q9Y5R2 645 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 ZNF816-ZNF321PA0A0X1KG74 233 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 A0A1W2PP11 408 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 OR6C6A6NF89 314 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 C17orf51A8MQB3 221 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 PRR32B1ATL7 298 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 H3BMH7 237 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 CYB5BO43169 146 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 CD74P04233 296 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 CD63P08962 238 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 SRFP11831 508 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 TSPO2Q5TGU0 170 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 CST9LP1Q5W188 147 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 ROBO4Q8WZ75 1007 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 GFI1Q99684 422 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 NRIP2Q9BQI9 281 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 LPAR5Q9H1C0 372 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 A0A1W2PPH5 198 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 A6NCN8 305 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 FAM24AA6NFZ4 105 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 H3BP45 60 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 DEGS1O15121 323 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 TSPAN2O60636 221 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 CD8AP01732 235 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 ISG15P05161 165 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 MUC1P15941 1255 aaPredicted RBP7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 RCC1P18754 421 aaPredicted RBP7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 HAAOP46952 286 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 PRSS12P56730 875 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 FOXL2P58012 376 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 TAS2R30P59541 319 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 IGLV3-21P80748 117 aaPredicted RBP7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 BAXQ07812 192 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 VAX1Q5SQQ9 334 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 ZNF519Q8TB69 540 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 TOLLIPQ9H0E2 274 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 GPR132Q9UNW8 380 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 MTCH2Q9Y6C9 303 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 A0A1B0GTQ1 180 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 ZNF205O95201 554 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 IGHEP01854 428 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 ARG1P05089 322 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 SERPINA7P05543 415 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 CYB561P49447 251 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 CATR1Q13166 79 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 RAB35Q15286 201 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 LPAL2Q16609 132 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 CEACAM16Q2WEN9 425 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 C4orf17Q53FE4 359 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 KCNIP4Q6PIL6 250 aa7.43□□□□□ -1.22
LIMCH1-216ENST00000512820 LDLRAD3Q86YD5 345 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms