RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 CLDN12P56749 244 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 GSCP56915 257 aaPredicted RBP7.99□□□□□ -1.13
VCAN-208ENST00000512590 BTG2P78543 158 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 CRELD2Q6UXH1 353 aaPredicted RBP7.99□□□□□ -1.13
VCAN-208ENST00000512590 TMEM179BQ7Z7N9 219 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 FLYWCH2Q96CP2 140 aaKnown RBP7.99□□□□□ -1.13
VCAN-208ENST00000512590 SNRNP40Q96DI7 357 aaKnown RBP7.99□□□□□ -1.13
VCAN-208ENST00000512590 PEBP4Q96S96 227 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 FOXC2Q99958 501 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 ITSN1Q15811 1721 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 PSMB11A5LHX3 300 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 SOD1P00441 154 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 CBR1P16152 277 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 DRD3P35462 400 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 RBMS2Q15434 407 aaKnown RBP7.99□□□□□ -1.13
VCAN-208ENST00000512590 SLC35D3Q5M8T2 416 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 SLC16A11Q8NCK7 471 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 CLRN3Q8NCR9 226 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 NOXO1Q8NFA2 376 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 OR13A1Q8NGR1 328 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 OR10R2Q8NGX6 335 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 OR10D3Q8NH80 312 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 MRGPRDQ8TDS7 321 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 EDA2RQ9HAV5 297 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 LILRA5A6NI73 299 aa7.98□□□□□ -1.13
VCAN-208ENST00000512590 FCGR2CP31995 323 aa7.98□□□□□ -1.13
VCAN-208ENST00000512590 MC5RP33032 325 aa7.98□□□□□ -1.13
VCAN-208ENST00000512590 PQLC3Q8N755 202 aa7.98□□□□□ -1.13
VCAN-208ENST00000512590 FAM222BQ8WU58 562 aa7.98□□□□□ -1.13
VCAN-208ENST00000512590 FAM3DQ96BQ1 224 aa7.98□□□□□ -1.13
VCAN-208ENST00000512590 MS4A10Q96PG2 267 aa7.98□□□□□ -1.13
VCAN-208ENST00000512590 TAS2R4Q9NYW5 299 aa7.98□□□□□ -1.13
VCAN-208ENST00000512590 U3KQ87 197 aa7.98□□□□□ -1.13
VCAN-208ENST00000512590 DNAJC25-GNG10A0A024R161 153 aa7.98□□□□□ -1.13
VCAN-208ENST00000512590 SELENOFO60613 162 aa7.98□□□□□ -1.13
VCAN-208ENST00000512590 IGKV3-20P01619 116 aa7.98□□□□□ -1.13
VCAN-208ENST00000512590 GABRG2P18507 467 aa7.98□□□□□ -1.13
VCAN-208ENST00000512590 BCL3P20749 454 aa7.98□□□□□ -1.13
VCAN-208ENST00000512590 MAGEA5P43359 124 aa7.98□□□□□ -1.13
VCAN-208ENST00000512590 SUMO2P61956 95 aaKnown RBP7.98□□□□□ -1.13
VCAN-208ENST00000512590 MYPOPQ86VE0 399 aaPredicted RBP7.98□□□□□ -1.13
VCAN-208ENST00000512590 INHBBP09529 407 aa7.98□□□□□ -1.13
VCAN-208ENST00000512590 SUMO3P55854 103 aaPredicted RBP7.98□□□□□ -1.13
VCAN-208ENST00000512590 RPL32P62910 135 aaKnown RBP7.98□□□□□ -1.13
VCAN-208ENST00000512590 VAMP3Q15836 100 aa7.98□□□□□ -1.13
VCAN-208ENST00000512590 TMEM215Q68D42 235 aa7.98□□□□□ -1.13
VCAN-208ENST00000512590 ZNF787Q6DD87 383 aa7.98□□□□□ -1.13
VCAN-208ENST00000512590 C16orf82Q7Z2V1 217 aa7.98□□□□□ -1.13
VCAN-208ENST00000512590 TMEM123Q8N131 208 aa7.98□□□□□ -1.13
VCAN-208ENST00000512590 RPS4Y2Q8TD47 263 aa7.98□□□□□ -1.13
VCAN-208ENST00000512590 MRC1P22897 1456 aa7.98□□□□□ -1.13
VCAN-208ENST00000512590 IQGAP1P46940 1657 aa7.98□□□□□ -1.13
VCAN-208ENST00000512590 LOC107986453A0A1B0GWG9 222 aa7.98□□□□□ -1.13
VCAN-208ENST00000512590 KLF7O75840 302 aaPredicted RBP7.98□□□□□ -1.13
VCAN-208ENST00000512590 HIST1H1BP16401 226 aaKnown RBP7.98□□□□□ -1.13
VCAN-208ENST00000512590 CALCRP30988 508 aa7.98□□□□□ -1.13
VCAN-208ENST00000512590 CDC20Q12834 499 aa7.98□□□□□ -1.13
VCAN-208ENST00000512590 TOMM34Q15785 309 aaPredicted RBP7.98□□□□□ -1.13
VCAN-208ENST00000512590 LRRC75BQ2VPJ9 315 aa7.98□□□□□ -1.13
VCAN-208ENST00000512590 SLC48A1Q6P1K1 146 aa7.98□□□□□ -1.13
VCAN-208ENST00000512590 SLC35B2Q8TB61 432 aa7.98□□□□□ -1.13
VCAN-208ENST00000512590 C4orf45Q96LM5 186 aa7.98□□□□□ -1.13
VCAN-208ENST00000512590 HSPE1-MOB4S4R3N1 261 aa7.98□□□□□ -1.13
VCAN-208ENST00000512590 LOC285095A0A1B0GVY8 99 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 TMEM202A6NGA9 273 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 CGB1A6NKQ9 187 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 NOTOA8MTQ0 251 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 SPINK2P20155 84 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 GUCA2AQ02747 115 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 SKP2Q13309 424 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 ETV3LQ6ZN32 361 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 SH2D5Q6ZV89 423 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 STHQ8IWL8 128 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 PLD6Q8N2A8 252 aaKnown RBP7.97□□□□□ -1.13
VCAN-208ENST00000512590 YIPF5Q969M3 257 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 GNPNAT1Q96EK6 184 aaPredicted RBP7.97□□□□□ -1.13
VCAN-208ENST00000512590 ZNF300Q96RE9 604 aaPredicted RBP7.97□□□□□ -1.13
VCAN-208ENST00000512590 RTN4RQ9BZR6 473 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 SLA2Q9H6Q3 261 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 MED29Q9NX70 200 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 HS3ST2Q9Y278 367 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 OR5B21A6NL26 309 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 ATP6V1G2-DDX39BF2Z307 99 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 SLC25A20O43772 301 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 LALBAP00709 142 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 COX6CP09669 75 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 CTSSP25774 331 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 NMUP48645 174 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 MOGAT2Q3SYC2 334 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 LKAAEAR1Q8TD35 194 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 MUS81Q96NY9 551 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 PCYT2Q99447 389 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 TCEAL7Q9BRU2 100 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 RAXQ9Y2V3 346 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 TMEM56-RWDD3S4R434 201 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 GLI4P10075 376 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 OR2B8PP59922 312 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 SELENOTP62341 195 aa7.97□□□□□ -1.13
VCAN-208ENST00000512590 PITX1P78337 314 aaPredicted RBP7.97□□□□□ -1.13
VCAN-208ENST00000512590 TSPAN31Q12999 210 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms