RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 NME1P15531 152 aaKnown RBP5.18□□□□□ -1.58
USP38-203ENST00000511739 S100A11P31949 105 aa5.18□□□□□ -1.58
USP38-203ENST00000511739 THBS4P35443 961 aa5.18□□□□□ -1.58
USP38-203ENST00000511739 CCR6P51684 374 aa5.18□□□□□ -1.58
USP38-203ENST00000511739 TMPRSS3P57727 454 aa5.18□□□□□ -1.58
USP38-203ENST00000511739 HERVK_113P61574 105 aa5.18□□□□□ -1.58
USP38-203ENST00000511739 BTN1A1Q13410 526 aa5.18□□□□□ -1.58
USP38-203ENST00000511739 VAMP3Q15836 100 aa5.18□□□□□ -1.58
USP38-203ENST00000511739 ECSCRQ19T08 205 aa5.18□□□□□ -1.58
USP38-203ENST00000511739 ZNF658BQ4V348 819 aaPredicted RBP5.18□□□□□ -1.58
USP38-203ENST00000511739 LYRM7Q5U5X0 104 aa5.18□□□□□ -1.58
USP38-203ENST00000511739 OR2I1PQ8NGU4 316 aa5.18□□□□□ -1.58
USP38-203ENST00000511739 VSTM2AQ8TAG5 236 aa5.18□□□□□ -1.58
USP38-203ENST00000511739 MED30Q96HR3 178 aa5.18□□□□□ -1.58
USP38-203ENST00000511739 GABRG3Q99928 467 aa5.18□□□□□ -1.58
USP38-203ENST00000511739 CXXC4Q9H2H0 198 aa5.18□□□□□ -1.58
USP38-203ENST00000511739 PIGMQ9H3S5 423 aa5.18□□□□□ -1.58
USP38-203ENST00000511739 ADGRL4Q9HBW9 690 aa5.18□□□□□ -1.58
USP38-203ENST00000511739 GLRX2Q9NS18 164 aa5.18□□□□□ -1.58
USP38-203ENST00000511739 A4GNTQ9UNA3 340 aa5.18□□□□□ -1.58
USP38-203ENST00000511739 ICE1Q9Y2F5 2266 aa5.18□□□□□ -1.58
USP38-203ENST00000511739 IGHV3OR16-12A0A075B7B8 117 aa5.18□□□□□ -1.58
USP38-203ENST00000511739 A0A0B4J293 547 aa5.18□□□□□ -1.58
USP38-203ENST00000511739 MMP11P24347 488 aa5.18□□□□□ -1.58
USP38-203ENST00000511739 KCNJ3P48549 501 aa5.18□□□□□ -1.58
USP38-203ENST00000511739 DAPP51397 102 aa5.18□□□□□ -1.58
USP38-203ENST00000511739 OR2F1Q13607 317 aa5.18□□□□□ -1.58
USP38-203ENST00000511739 PRSS45Q7RTY3 260 aa5.18□□□□□ -1.58
USP38-203ENST00000511739 BCDIN3DQ7Z5W3 292 aaKnown RBP5.18□□□□□ -1.58
USP38-203ENST00000511739 DOLPP1Q86YN1 238 aa5.18□□□□□ -1.58
USP38-203ENST00000511739 OR52N4Q8NGI2 321 aa5.18□□□□□ -1.58
USP38-203ENST00000511739 NRG4Q8WWG1 115 aa5.18□□□□□ -1.58
USP38-203ENST00000511739 MARC2Q969Z3 335 aa5.18□□□□□ -1.58
USP38-203ENST00000511739 MRGPRX3Q96LB0 322 aa5.18□□□□□ -1.58
USP38-203ENST00000511739 ZDHHC11Q9H8X9 412 aa5.18□□□□□ -1.58
USP38-203ENST00000511739 CLN8Q9UBY8 286 aa5.18□□□□□ -1.58
USP38-203ENST00000511739 A0A087WV62 115 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 KLK8O60259 260 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 GYPAP02724 150 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 MGPP08493 103 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 ACSM4P0C7M7 580 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 FUT3P21217 361 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 VDAC1P21796 283 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 HTR1DP28221 377 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 EPHA8P29322 1005 aaPredicted RBP5.17□□□□□ -1.58
USP38-203ENST00000511739 BSGP35613 385 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 KIR3DL2P43630 455 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 HCCSP53701 268 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 LOXL3P58215 753 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 TAS2R60P59551 318 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 SPCS3P61009 180 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 COL19A1Q14993 1142 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 Q3ZCU0 254 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 ASCL5Q7RTU5 278 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 FAM122BQ7Z309 247 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 LAX1Q8IWV1 398 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 C5orf17Q8NAS9 161 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 OR4C12Q96R67 309 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 MRPL37Q9BZE1 423 aaKnown RBP5.17□□□□□ -1.58
USP38-203ENST00000511739 TREM2Q9NZC2 230 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 DOK5Q9P104 306 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 SOX15O60248 233 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 ALDOCP09972 364 aaKnown RBP5.17□□□□□ -1.58
USP38-203ENST00000511739 FAM87AP0C7U9 286 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 CD82P27701 267 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 LSAMPQ13449 338 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 CLEC12BQ2HXU8 276 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 CD276Q5ZPR3 534 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 FDX2Q6P4F2 183 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 UNQ9370/PRO34162Q6UXP9 181 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 OR4S1Q8NGB4 309 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 Q8WTZ3 238 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 RTN4IP1Q8WWV3 396 aaPredicted RBP5.17□□□□□ -1.58
USP38-203ENST00000511739 FGF11Q92914 225 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 C14orf79Q96F83 325 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 OR5M11Q96RB7 305 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 PLEKHA2Q9HB19 425 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 KIAA0100Q14667 2235 aaKnown RBP5.17□□□□□ -1.58
USP38-203ENST00000511739 TRDV1A0A1B0GX56 115 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 FAM24AA6NFZ4 105 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 RFPL4AA6NLU0 287 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 RFPL4AL1F8VTS6 287 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 H3BP45 60 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 ZNF354AO60765 605 aaPredicted RBP5.17□□□□□ -1.58
USP38-203ENST00000511739 SP1P08047 785 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 PI3P19957 117 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 KRTDAPP60985 99 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 ROM1Q03395 351 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 SOWAHCQ53LP3 525 aaPredicted RBP5.17□□□□□ -1.58
USP38-203ENST00000511739 NCR3LG1Q68D85 454 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 AMMECR1LQ6DCA0 310 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 VWA1Q6PCB0 445 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 TMEM179BQ7Z7N9 219 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 ZNF683Q8IZ20 524 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 SLC38A6Q8IZM9 456 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 CT55Q8WUE5 264 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 OR2A5Q96R48 311 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 VPS25Q9BRG1 176 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 FBXO8Q9NRD0 319 aa5.17□□□□□ -1.58
USP38-203ENST00000511739 ACER3Q9NUN7 267 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms