RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 ANGPTL4Q9BY76 406 aa1.77□□□□□ -2.13
TRAPPC11-207ENST00000511409 MRPL20Q9BYC9 149 aaKnown RBP1.77□□□□□ -2.13
TRAPPC11-207ENST00000511409 API5Q9BZZ5 524 aaKnown RBP1.77□□□□□ -2.13
TRAPPC11-207ENST00000511409 GAL3ST2Q9H3Q3 398 aa1.77□□□□□ -2.13
TRAPPC11-207ENST00000511409 STX18Q9P2W9 335 aaKnown RBP1.77□□□□□ -2.13
TRAPPC11-207ENST00000511409 HMGXB4Q9UGU5 601 aa1.77□□□□□ -2.13
TRAPPC11-207ENST00000511409 TRIP11Q15643 1979 aa1.76□□□□□ -2.13
TRAPPC11-207ENST00000511409 LOXHD1Q8IVV2 1947 aa1.76□□□□□ -2.13
TRAPPC11-207ENST00000511409 CDK1P06493 297 aa1.76□□□□□ -2.13
TRAPPC11-207ENST00000511409 PFN1P07737 140 aaKnown RBP1.76□□□□□ -2.13
TRAPPC11-207ENST00000511409 OR5AL1P0C617 328 aa1.76□□□□□ -2.13
TRAPPC11-207ENST00000511409 SEC11BP0C7V7 166 aa1.76□□□□□ -2.13
TRAPPC11-207ENST00000511409 GZMAP12544 262 aa1.76□□□□□ -2.13
TRAPPC11-207ENST00000511409 HLA-DMAP28067 261 aa1.76□□□□□ -2.13
TRAPPC11-207ENST00000511409 MLF1P58340 268 aa1.76□□□□□ -2.13
TRAPPC11-207ENST00000511409 FAM53BQ14153 422 aa1.76□□□□□ -2.13
TRAPPC11-207ENST00000511409 SP6Q3SY56 376 aa1.76□□□□□ -2.13
TRAPPC11-207ENST00000511409 ZNF678Q5SXM1 525 aa1.76□□□□□ -2.13
TRAPPC11-207ENST00000511409 C6orf183Q5T699 404 aa1.76□□□□□ -2.13
TRAPPC11-207ENST00000511409 MORN3Q6PF18 240 aaPredicted RBP1.76□□□□□ -2.13
TRAPPC11-207ENST00000511409 EPGNQ6UW88 154 aa1.76□□□□□ -2.13
TRAPPC11-207ENST00000511409 RNF10Q8N5U6 811 aaKnown RBP1.76□□□□□ -2.13
TRAPPC11-207ENST00000511409 SLC26A10Q8NG04 563 aa1.76□□□□□ -2.13
TRAPPC11-207ENST00000511409 OR2M7Q8NG81 312 aa1.76□□□□□ -2.13
TRAPPC11-207ENST00000511409 ZFAND1Q8TCF1 268 aa1.76□□□□□ -2.13
TRAPPC11-207ENST00000511409 ORAOV1Q8WV07 137 aa1.76□□□□□ -2.13
TRAPPC11-207ENST00000511409 RBPMSQ93062 196 aaKnown RBP1.76□□□□□ -2.13
TRAPPC11-207ENST00000511409 TOP1MTQ969P6 601 aa1.76□□□□□ -2.13
TRAPPC11-207ENST00000511409 C20orf144Q9BQM9 153 aa1.76□□□□□ -2.13
TRAPPC11-207ENST00000511409 UTP23Q9BRU9 249 aaKnown RBP1.76□□□□□ -2.13
TRAPPC11-207ENST00000511409 TMED9Q9BVK6 235 aa1.76□□□□□ -2.13
TRAPPC11-207ENST00000511409 BEX2Q9BXY8 128 aa1.76□□□□□ -2.13
TRAPPC11-207ENST00000511409 MS4A8Q9BY19 250 aa1.76□□□□□ -2.13
TRAPPC11-207ENST00000511409 LHX5Q9H2C1 402 aa1.76□□□□□ -2.13
TRAPPC11-207ENST00000511409 TDRD3Q9H7E2 651 aaKnown RBP1.76□□□□□ -2.13
TRAPPC11-207ENST00000511409 SLC22A7Q9Y694 548 aa1.76□□□□□ -2.13
TRAPPC11-207ENST00000511409 V9GYY9 64 aa1.76□□□□□ -2.13
TRAPPC11-207ENST00000511409 THADAQ6YHU6 1953 aa1.76□□□□□ -2.13
TRAPPC11-207ENST00000511409 AQRO60306 1485 aaKnown RBP eCLIP1.75□□□□□ -2.136e-6■■■■□ 25.1
TRAPPC11-207ENST00000511409 KIF27Q86VH2 1401 aa1.75□□□□□ -2.13
TRAPPC11-207ENST00000511409 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
TRAPPC11-207ENST00000511409 ELP1O95163 1332 aa1.75□□□□□ -2.13
TRAPPC11-207ENST00000511409 TRAV8-7A0A075B6U6 113 aa1.75□□□□□ -2.13
TRAPPC11-207ENST00000511409 IGKV3D-11A0A0A0MRZ8 115 aa1.75□□□□□ -2.13
TRAPPC11-207ENST00000511409 RNF113AO15541 343 aaKnown RBP1.75□□□□□ -2.13
TRAPPC11-207ENST00000511409 KDELR3O43731 214 aa1.75□□□□□ -2.13
TRAPPC11-207ENST00000511409 ALOX12BO75342 701 aa1.75□□□□□ -2.13
TRAPPC11-207ENST00000511409 DHRS3O75911 302 aa1.75□□□□□ -2.13
TRAPPC11-207ENST00000511409 CXorf1O96002 111 aa1.75□□□□□ -2.13
TRAPPC11-207ENST00000511409 OTCP00480 354 aa1.75□□□□□ -2.13
TRAPPC11-207ENST00000511409 IGHV1-46P01743 117 aa1.75□□□□□ -2.13
TRAPPC11-207ENST00000511409 CRYGCP07315 174 aa1.75□□□□□ -2.13
TRAPPC11-207ENST00000511409 OR4Q2P0C623 313 aa1.75□□□□□ -2.13
TRAPPC11-207ENST00000511409 PTNP21246 168 aa1.75□□□□□ -2.13
TRAPPC11-207ENST00000511409 HTR2CP28335 458 aa1.75□□□□□ -2.13
TRAPPC11-207ENST00000511409 TGM4P49221 684 aa1.75□□□□□ -2.13
TRAPPC11-207ENST00000511409 RPL10AP62906 217 aaKnown RBP1.75□□□□□ -2.13
TRAPPC11-207ENST00000511409 IL5RAQ01344 420 aa1.75□□□□□ -2.13
TRAPPC11-207ENST00000511409 BIKQ13323 160 aa1.75□□□□□ -2.13
TRAPPC11-207ENST00000511409 TAL2Q16559 108 aa1.75□□□□□ -2.13
TRAPPC11-207ENST00000511409 FBXL19-AS1Q494R0 122 aa1.75□□□□□ -2.13
TRAPPC11-207ENST00000511409 CDNFQ49AH0 187 aa1.75□□□□□ -2.13
TRAPPC11-207ENST00000511409 ASCL4Q6XD76 172 aa1.75□□□□□ -2.13
TRAPPC11-207ENST00000511409 TRMT10CQ7L0Y3 403 aaKnown RBP1.75□□□□□ -2.13
TRAPPC11-207ENST00000511409 ASCC1Q8N9N2 400 aaKnown RBP1.75□□□□□ -2.13
TRAPPC11-207ENST00000511409 NT5CQ8TCD5 201 aa1.75□□□□□ -2.13
TRAPPC11-207ENST00000511409 SMIM8Q96KF7 97 aa1.75□□□□□ -2.13
TRAPPC11-207ENST00000511409 METTL26Q96S19 204 aa1.75□□□□□ -2.13
TRAPPC11-207ENST00000511409 TM6SF2Q9BZW4 377 aa1.75□□□□□ -2.13
TRAPPC11-207ENST00000511409 COA1Q9GZY4 146 aa1.75□□□□□ -2.13
TRAPPC11-207ENST00000511409 CHRNA10Q9GZZ6 450 aa1.75□□□□□ -2.13
TRAPPC11-207ENST00000511409 PORCNQ9H237 461 aa1.75□□□□□ -2.13
TRAPPC11-207ENST00000511409 SND1-IT1Q9HBX3 110 aa1.75□□□□□ -2.13
TRAPPC11-207ENST00000511409 ANKHQ9HCJ1 492 aa1.75□□□□□ -2.13
TRAPPC11-207ENST00000511409 OR2S2Q9NQN1 319 aa1.75□□□□□ -2.13
TRAPPC11-207ENST00000511409 INIPQ9NRY2 104 aa1.75□□□□□ -2.13
TRAPPC11-207ENST00000511409 PRO0628Q9UI54 55 aa1.75□□□□□ -2.13
TRAPPC11-207ENST00000511409 CHTOPQ9Y3Y2 248 aaKnown RBP1.75□□□□□ -2.13
TRAPPC11-207ENST00000511409 BZW2Q9Y6E2 419 aaKnown RBP1.75□□□□□ -2.13
TRAPPC11-207ENST00000511409 SVILO95425 2214 aa1.74□□□□□ -2.13
TRAPPC11-207ENST00000511409 TVP23AA6NH52 213 aa1.74□□□□□ -2.13
TRAPPC11-207ENST00000511409 RGS5O15539 181 aa1.74□□□□□ -2.13
TRAPPC11-207ENST00000511409 ENSAO43768 121 aaKnown RBP1.74□□□□□ -2.13
TRAPPC11-207ENST00000511409 GMDSO60547 372 aa1.74□□□□□ -2.13
TRAPPC11-207ENST00000511409 OR2A4O95047 310 aa1.74□□□□□ -2.13
TRAPPC11-207ENST00000511409 SNAI1O95863 264 aaPredicted RBP1.74□□□□□ -2.13
TRAPPC11-207ENST00000511409 LIPCP11150 499 aa1.74□□□□□ -2.13
TRAPPC11-207ENST00000511409 DEKP35659 375 aaKnown RBP1.74□□□□□ -2.13
TRAPPC11-207ENST00000511409 NUP62P37198 522 aaPredicted RBP1.74□□□□□ -2.13
TRAPPC11-207ENST00000511409 TUFMP49411 452 aaKnown RBP1.74□□□□□ -2.13
TRAPPC11-207ENST00000511409 NUDT2P50583 147 aa1.74□□□□□ -2.13
TRAPPC11-207ENST00000511409 IGFBP7Q16270 282 aa1.74□□□□□ -2.13
TRAPPC11-207ENST00000511409 HNRNPA1L2Q32P51 320 aaKnown RBP1.74□□□□□ -2.13
TRAPPC11-207ENST00000511409 NKAIN1Q4KMZ8 207 aa1.74□□□□□ -2.13
TRAPPC11-207ENST00000511409 TMEM69Q5SWH9 247 aa1.74□□□□□ -2.13
TRAPPC11-207ENST00000511409 CLEC19AQ6UXS0 136 aa1.74□□□□□ -2.13
TRAPPC11-207ENST00000511409 BRD3OSQ6XYD6 125 aa1.74□□□□□ -2.13
TRAPPC11-207ENST00000511409 CCNYL1Q8N7R7 359 aa1.74□□□□□ -2.13
TRAPPC11-207ENST00000511409 ZDHHC22Q8N966 263 aa1.74□□□□□ -2.13
TRAPPC11-207ENST00000511409 OR4K2Q8NGD2 314 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms