RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 ZNF641Q96N77 438 aaPredicted RBP2.87□□□□□ -1.95
NUP54-209ENST00000510569 CLCC1Q96S66 551 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 CPXM1Q96SM3 734 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 ZNF2Q9BSG1 426 aaPredicted RBP2.87□□□□□ -1.95
NUP54-209ENST00000510569 TMEM109Q9BVC6 243 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 TIPINQ9BVW5 301 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 BEX2Q9BXY8 128 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 RAB34Q9BZG1 259 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 PCBD2Q9H0N5 130 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 DHX35Q9H5Z1 703 aaKnown RBP2.87□□□□□ -1.95
NUP54-209ENST00000510569 C11orf49Q9H6J7 331 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 CAB39LQ9H9S4 337 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 UGT1A7Q9HAW7 530 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 TMBIM4Q9HC24 238 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 C6orf50Q9HD87 102 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 THUMPD1Q9NXG2 353 aaKnown RBP2.87□□□□□ -1.95
NUP54-209ENST00000510569 TMCO1Q9UM00 188 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 UBQLN1Q9UMX0 589 aaKnown RBP2.87□□□□□ -1.95
NUP54-209ENST00000510569 DHRS7Q9Y394 339 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 GMPPBQ9Y5P6 360 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 MTCH2Q9Y6C9 303 aa2.87□□□□□ -1.95
NUP54-209ENST00000510569 TAF1LQ8IZX4 1826 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 ZNF831Q5JPB2 1677 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 A0A0A6YYD5 115 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 NPIPA5A0A0B4J1W7 369 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 A0A1W2PQ67 120 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 ANKRD20A5PA0PJZ0 165 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 NPIPA5E9PKD4 350 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 G3V4G9 280 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 DFFAO00273 331 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 KPNA3O00505 521 aaPredicted RBP2.86□□□□□ -1.95
NUP54-209ENST00000510569 ATP5LO75964 103 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 CA1P00915 261 aaPredicted RBP2.86□□□□□ -1.95
NUP54-209ENST00000510569 PPBPP02775 128 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 IFNA16P05015 189 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 ISG15P05161 165 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 GFAPP14136 432 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 ABOP16442 354 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 CELP19835 753 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 SSTR5P35346 364 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 LEPP41159 167 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 BDKRB1P46663 353 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 QARSP47897 775 aaKnown RBP2.86□□□□□ -1.95
NUP54-209ENST00000510569 TAS2R60P59551 318 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 RANP62826 216 aaKnown RBP2.86□□□□□ -1.95
NUP54-209ENST00000510569 SLC35B1P78383 322 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 RPL19P84098 196 aaKnown RBP2.86□□□□□ -1.95
NUP54-209ENST00000510569 FAM3AP98173 230 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 RIPPLY1Q0D2K3 151 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 SPA17Q15506 151 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 NDUFA9Q16795 377 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 ACTL10Q5JWF8 245 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 PPM1LQ5SGD2 360 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 PRR5LQ6MZQ0 368 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 PNCKQ6P2M8 343 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 DHRS4L2Q6PKH6 230 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 BTNL3Q6UXE8 466 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 TMEM179Q6ZVK1 233 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 CYS1Q717R9 158 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 WDFY1Q8IWB7 410 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 LRRC52Q8N7C0 313 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 VN1R2Q8NFZ6 395 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 OR1M1Q8NGA1 313 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 OR5L1Q8NGL2 311 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 OR51A7Q8NH64 312 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 RNASE11Q8TAA1 199 aaKnown RBP2.86□□□□□ -1.95
NUP54-209ENST00000510569 FAM45AQ8TCE6 357 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 CASTOR1Q8WTX7 329 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 MAFIPQ8WZ33 124 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 OR8D1Q8WZ84 308 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 DLX4Q92988 240 aaPredicted RBP2.86□□□□□ -1.95
NUP54-209ENST00000510569 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.86□□□□□ -1.95
NUP54-209ENST00000510569 FLYWCH2Q96CP2 140 aaKnown RBP2.86□□□□□ -1.95
NUP54-209ENST00000510569 OR2V2Q96R30 315 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 HBEGFQ99075 208 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 HOPXQ9BPY8 73 aaPredicted RBP2.86□□□□□ -1.95
NUP54-209ENST00000510569 SLC35A5Q9BS91 424 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 CHRNA10Q9GZZ6 450 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 ALX4Q9H161 411 aaPredicted RBP2.86□□□□□ -1.95
NUP54-209ENST00000510569 Q9H3A6 140 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 MFSD1Q9H3U5 465 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 ZSCAN16Q9H4T2 348 aaPredicted RBP2.86□□□□□ -1.95
NUP54-209ENST00000510569 NHEJ1Q9H9Q4 299 aaPredicted RBP2.86□□□□□ -1.95
NUP54-209ENST00000510569 RHOFQ9HBH0 211 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 EML4Q9HC35 981 aaKnown RBP2.86□□□□□ -1.95
NUP54-209ENST00000510569 NRN1Q9NPD7 142 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 SPANXB1Q9NS25 103 aaPredicted RBP2.86□□□□□ -1.95
NUP54-209ENST00000510569 GIN1Q9NXP7 522 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 TREM2Q9NZC2 230 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 RCL1Q9Y2P8 373 aaKnown RBP2.86□□□□□ -1.95
NUP54-209ENST00000510569 NDUFAF1Q9Y375 327 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 AK6Q9Y3D8 172 aaKnown RBP2.86□□□□□ -1.95
NUP54-209ENST00000510569 OR51B4Q9Y5P0 310 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 PCDH11XQ9BZA7 1347 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 ITGB4P16144 1822 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 NUP98P52948 1817 aa2.86□□□□□ -1.95
NUP54-209ENST00000510569 MYH6P13533 1939 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 MYH2Q9UKX2 1941 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 MYH13Q9UKX3 1938 aa2.85□□□□□ -1.95
NUP54-209ENST00000510569 LTBP1Q14766 1721 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms