RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 SYS1Q8N2H4 156 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 DHRSXQ8N5I4 330 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 ACBD7Q8N6N7 88 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 ZFP41Q8N8Y5 198 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 SCCPDHQ8NBX0 429 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 ZNF540Q8NDQ6 660 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 SEMA6DQ8NFY4 1073 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 NPRL2Q8WTW4 380 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 AQP3Q92482 292 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 PIGCQ92535 297 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 RFKQ969G6 155 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 TMEM186Q96B77 213 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 ORAI1Q96D31 301 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 PGLYRP3Q96LB9 341 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 GAFA1Q96PS6 74 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 CHST5Q9GZS9 411 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 DCLRE1BQ9H816 532 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 ZMAT4Q9H898 229 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 ELL3Q9HB65 397 aaPredicted RBP5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 HIF1ANQ9NWT6 349 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 PSORS1C1Q9UIG5 152 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 DIMT1Q9UNQ2 313 aaKnown RBP5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 PIGLQ9Y2B2 252 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 LSM2Q9Y333 95 aaKnown RBP5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 SNX5Q9Y5X3 404 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 X6R8D5 127 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 TENM1Q9UKZ4 2725 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 IGKV1D-17A0A075B6S4 117 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 PPIAL4EA0A075B759 164 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 LOC105371242A0A075B767 164 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 IGKV1-12A0A0C4DH73 117 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 DAPL1A0PJW8 107 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 OOEPA6NGQ2 149 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 A6NLC8 198 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 B4DSR2 109 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 ZNF732B4DXR9 585 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 PPIAL4DF5H284 164 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 H0YAE9 185 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 J3QLW9 94 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 FSTL3O95633 263 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 IGKV1D-12P01611 117 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 GYPAP02724 150 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 PPIAL4FP0DN26 164 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 PIPP12273 146 aaPredicted RBP5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 ZNF19P17023 458 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 CFL1P23528 166 aaKnown RBP5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 MPZP25189 248 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 C21orf33P30042 268 aaPredicted RBP5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 GMFBP60983 142 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 ALKBH1Q13686 389 aaKnown RBP5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 IRF3Q14653 427 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 CDK5R1Q15078 307 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 PDCD1Q15116 288 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 DGUOKQ16854 277 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 PLCXD3Q63HM9 321 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 WDR25Q64LD2 544 aaPredicted RBP5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 IZUMO2Q6UXV1 221 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 DOK3Q7L591 496 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 TCF23Q7RTU1 214 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 COMMD2Q86X83 199 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 BOLLQ8N9W6 283 aaKnown RBP5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 CSNK2A3Q8NEV1 391 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 OR51A2Q8NGJ7 313 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 OR51F2Q8NH61 342 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 TRMT10AQ8TBZ6 339 aaKnown RBP5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 RAB1CQ92928 201 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 PDCD1LG2Q9BQ51 273 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 FN3KRPQ9HA64 309 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 HES4Q9HCC6 221 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 SNTG1Q9NSN8 517 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 ZNF581Q9P0T4 197 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 RNF7Q9UBF6 113 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 KCNS2Q9ULS6 477 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 PPIAL4AQ9Y536 164 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 MPC1Q9Y5U8 109 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 STAB1Q9NY15 2570 aa5.97□□□□□ -1.45
TOPBP1-207ENST00000509162 COL6A5A8TX70 2615 aa5.96□□□□□ -1.45
TOPBP1-207ENST00000509162 WNK2Q9Y3S1 2297 aa5.96□□□□□ -1.45
TOPBP1-207ENST00000509162 DHRS7CA6NNS2 312 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 J3QT63 122 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 SLC1A7O00341 560 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 AKR7A2O43488 359 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 SYT7O43581 403 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 MPZL2O60487 215 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 ISG15P05161 165 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 UBCP0CG48 685 aaKnown RBP5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 PGA5P0DJD9 388 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 IGHV4-38-2P0DP08 117 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 MMP9P14780 707 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 ATP6V1B1P15313 513 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 RPS2P15880 293 aaKnown RBP5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 MYF6P23409 242 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 CFHR2P36980 270 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 ERVK11-1P61568 191 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 PRB3Q04118 309 aaPredicted RBP5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 SLC3A1Q07837 685 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 RIPPLY1Q0D2K3 151 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 IL18R1Q13478 541 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 INSL4Q14641 139 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 CEACAM21Q3KPI0 293 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms