RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 ZNF321PQ8N8H1 164 aa4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 PLPP5Q8NEB5 264 aa4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 SEMA6DQ8NFY4 1073 aa4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 OR8B12Q8NGG6 310 aa4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 OR5L2Q8NGL0 311 aa4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 OR13D1Q8NGV5 346 aa4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 OR6X1Q8NH79 312 aa4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 RNASE11Q8TAA1 199 aaKnown RBP4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 CD300LFQ8TDQ1 290 aa4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 SSC4DQ8WTU2 575 aa4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 MAFIPQ8WZ33 124 aa4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 ROBO4Q8WZ75 1007 aa4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 TSLPQ969D9 159 aa4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 SPSB1Q96BD6 273 aa4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 RBMXL1Q96E39 390 aaKnown RBP4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 GNPNAT1Q96EK6 184 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 PGAM5Q96HS1 289 aa4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 C1orf147Q96MC9 270 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 PFDN5Q99471 154 aa4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 NKX3-1Q99801 234 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 MESP1Q9BRJ9 268 aa4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 ZNF2Q9BSG1 426 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 NAA11Q9BSU3 229 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 MRPL13Q9BYD1 178 aaKnown RBP4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 SLC25A31Q9H0C2 315 aa4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 METTL9Q9H1A3 318 aa4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 BANF2Q9H503 90 aa4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 C7orf69Q9H7B7 122 aa4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 NAA60Q9H7X0 242 aa4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 SLC2A4RGQ9NR83 387 aa4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 GPR27Q9NS67 375 aa4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 ZNF701Q9NV72 531 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 FAM86C1Q9NVL1 165 aa4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 PLEKHJ1Q9NW61 149 aa4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 GFOD1Q9NXC2 390 aa4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 GAR1Q9NY12 217 aaKnown RBP4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 DHCR7Q9UBM7 475 aaKnown RBP4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 ANXA10Q9UJ72 324 aa4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 HSF4Q9ULV5 492 aa4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 AMDHD2Q9Y303 409 aa4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 PTRH2Q9Y3E5 179 aaKnown RBP4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 HEATR5AQ86XA9 2040 aa4.36□□□□□ -1.71
HMGB3P16-201ENST00000508037 EML5Q05BV3 1969 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 FANCMQ8IYD8 2048 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 NSG1A0A0A6YYJ2 146 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 A0A1B0GX78 115 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 DUXBA0A1W2PPF3 345 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 PMS2P1A4D2B8 440 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 RBFOX3A6NFN3 312 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 SDCBPO00560 298 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 ADAM10O14672 748 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 NME2P1O60361 137 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 RAD51DO75771 328 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 DHRS3O75911 302 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 CDS2O95674 445 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 IGLV3-19P01714 112 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 HPNP05981 417 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 CTSBP07858 339 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 OR8U8P0C7N1 319 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 PGA4P0DJD7 388 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 PGA3P0DJD8 388 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 OR5H8P0DN80 308 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 HLA-DOBP13765 273 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 NQO2P16083 231 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 CBR1P16152 277 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 PI3P19957 117 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 RPS10P46783 165 aaKnown RBP4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 HTR5AP47898 357 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 UCP3P55916 312 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 MTCP1P56278 107 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 TMEM50BP56557 158 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 PIGPP57054 158 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 FBXW4P57775 412 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 UBE2KP61086 200 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 HERV-K104P61576 105 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 VAMP2P63027 116 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 RNF4P78317 190 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 NKX6-1P78426 367 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 TLE4Q04727 773 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 HGFACQ04756 655 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 CNN3Q15417 329 aaKnown RBP4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 ZNF239Q16600 458 aaKnown RBP4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 HIKESHIQ53FT3 197 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 LBHQ53QV2 105 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 OTPQ5XKR4 325 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 OR2A2Q6IF42 318 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 ADAM5Q6NVV9 412 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 SLC25A47Q6Q0C1 308 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 PARM1Q6UWI2 310 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 HEPN1Q6WQI6 88 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 FBXW12Q6X9E4 464 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 RBMS3Q6XE24 437 aaKnown RBP4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 ZNF600Q6ZNG1 722 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 FAM57BQ71RH2 274 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 SLC35E3Q7Z769 313 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 LSRQ86X29 649 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 STX12Q86Y82 276 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 KMT5CQ86Y97 462 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 FAM219AQ8IW50 185 aa4.35□□□□□ -1.71
HMGB3P16-201ENST00000508037 SHISA5Q8N114 240 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms