RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 MYL12BO14950 172 aa0.83□□□□□ -2.28
HMGB1P29-201ENST00000505659 ERLIN1O75477 346 aa0.83□□□□□ -2.28
HMGB1P29-201ENST00000505659 FCN3O75636 299 aa0.83□□□□□ -2.28
HMGB1P29-201ENST00000505659 PTHP01270 115 aa0.83□□□□□ -2.28
HMGB1P29-201ENST00000505659 IGKV1D-33P01593 117 aa0.83□□□□□ -2.28
HMGB1P29-201ENST00000505659 IGKV1-33P01594 117 aa0.83□□□□□ -2.28
HMGB1P29-201ENST00000505659 ERCC1P07992 297 aaPredicted RBP0.83□□□□□ -2.28
HMGB1P29-201ENST00000505659 TACSTD2P09758 323 aa0.83□□□□□ -2.28
HMGB1P29-201ENST00000505659 CCL23P55773 120 aa0.83□□□□□ -2.28
HMGB1P29-201ENST00000505659 ENDOGQ14249 297 aaKnown RBP0.83□□□□□ -2.28
HMGB1P29-201ENST00000505659 BEX5Q5H9J7 111 aa0.83□□□□□ -2.28
HMGB1P29-201ENST00000505659 TWF2Q6IBS0 349 aaKnown RBP0.83□□□□□ -2.28
HMGB1P29-201ENST00000505659 EIF3MQ7L2H7 374 aaKnown RBP0.83□□□□□ -2.28
HMGB1P29-201ENST00000505659 PRNTQ86SH4 94 aa0.83□□□□□ -2.28
HMGB1P29-201ENST00000505659 APRG1Q8IVJ8 170 aa0.83□□□□□ -2.28
HMGB1P29-201ENST00000505659 CPNE9Q8IYJ1 553 aa0.83□□□□□ -2.28
HMGB1P29-201ENST00000505659 C8orf31Q8N9H6 132 aa0.83□□□□□ -2.28
HMGB1P29-201ENST00000505659 OR8S1Q8NH09 359 aa0.83□□□□□ -2.28
HMGB1P29-201ENST00000505659 TNFRSF14Q92956 283 aa0.83□□□□□ -2.28
HMGB1P29-201ENST00000505659 MRPL48Q96GC5 212 aaKnown RBP0.83□□□□□ -2.28
HMGB1P29-201ENST00000505659 RNF170Q96K19 258 aa0.83□□□□□ -2.28
HMGB1P29-201ENST00000505659 JSRP1Q96MG2 331 aaPredicted RBP0.83□□□□□ -2.28
HMGB1P29-201ENST00000505659 OPALINQ96PE5 141 aa0.83□□□□□ -2.28
HMGB1P29-201ENST00000505659 API5Q9BZZ5 524 aaKnown RBP0.83□□□□□ -2.28
HMGB1P29-201ENST00000505659 CLSTN2Q9H4D0 955 aa0.83□□□□□ -2.28
HMGB1P29-201ENST00000505659 ZNF286AQ9HBT8 521 aa0.83□□□□□ -2.28
HMGB1P29-201ENST00000505659 ABCB9Q9NP78 766 aa0.83□□□□□ -2.28
HMGB1P29-201ENST00000505659 C20orf96Q9NUD7 363 aaPredicted RBP0.83□□□□□ -2.28
HMGB1P29-201ENST00000505659 RAB20Q9NX57 234 aa0.83□□□□□ -2.28
HMGB1P29-201ENST00000505659 GCNT4Q9P109 453 aa0.83□□□□□ -2.28
HMGB1P29-201ENST00000505659 VAX2Q9UIW0 290 aa0.83□□□□□ -2.28
HMGB1P29-201ENST00000505659 RRP15Q9Y3B9 282 aaKnown RBP0.83□□□□□ -2.28
HMGB1P29-201ENST00000505659 TRAV8-6A0A0B4J262 113 aa0.82□□□□□ -2.28
HMGB1P29-201ENST00000505659 CDK1P06493 297 aa0.82□□□□□ -2.28
HMGB1P29-201ENST00000505659 KRT16P08779 473 aa0.82□□□□□ -2.28
HMGB1P29-201ENST00000505659 GSTM3P21266 225 aa0.82□□□□□ -2.28
HMGB1P29-201ENST00000505659 ERFP50548 548 aa0.82□□□□□ -2.28
HMGB1P29-201ENST00000505659 CLDN18P56856 261 aa0.82□□□□□ -2.28
HMGB1P29-201ENST00000505659 TAS2R39P59534 338 aa0.82□□□□□ -2.28
HMGB1P29-201ENST00000505659 LINC00303Q3SY05 128 aa0.82□□□□□ -2.28
HMGB1P29-201ENST00000505659 TMEM53Q6P2H8 277 aa0.82□□□□□ -2.28
HMGB1P29-201ENST00000505659 ZNF322Q6U7Q0 402 aaPredicted RBP0.82□□□□□ -2.28
HMGB1P29-201ENST00000505659 TMEM25Q86YD3 366 aa0.82□□□□□ -2.28
HMGB1P29-201ENST00000505659 ITFG1Q8TB96 612 aa0.82□□□□□ -2.28
HMGB1P29-201ENST00000505659 RAD51AP1Q96B01 352 aa0.82□□□□□ -2.28
HMGB1P29-201ENST00000505659 C9orf72Q96LT7 481 aa0.82□□□□□ -2.28
HMGB1P29-201ENST00000505659 Q96MT0 163 aa0.82□□□□□ -2.28
HMGB1P29-201ENST00000505659 AGMATQ9BSE5 352 aa0.82□□□□□ -2.28
HMGB1P29-201ENST00000505659 STMN4Q9H169 189 aaPredicted RBP0.82□□□□□ -2.28
HMGB1P29-201ENST00000505659 REEP1Q9H902 201 aa0.82□□□□□ -2.28
HMGB1P29-201ENST00000505659 CD209Q9NNX6 404 aa0.82□□□□□ -2.28
HMGB1P29-201ENST00000505659 MRPS30Q9NP92 439 aaKnown RBP0.82□□□□□ -2.28
HMGB1P29-201ENST00000505659 CCNB1IP1Q9NPC3 277 aa0.82□□□□□ -2.28
HMGB1P29-201ENST00000505659 MRPL16Q9NX20 251 aaKnown RBP0.82□□□□□ -2.28
HMGB1P29-201ENST00000505659 RABL2BQ9UNT1 228 aa0.82□□□□□ -2.28
HMGB1P29-201ENST00000505659 NSD2O96028 1365 aa0.82□□□□□ -2.28
HMGB1P29-201ENST00000505659 JCADQ9P266 1359 aa0.82□□□□□ -2.28
HMGB1P29-201ENST00000505659 SETD1AO15047 1707 aaKnown RBP0.81□□□□□ -2.28
HMGB1P29-201ENST00000505659 A0A0B4J2E0 115 aa0.81□□□□□ -2.28
HMGB1P29-201ENST00000505659 A0A1W2PRD5 423 aa0.81□□□□□ -2.28
HMGB1P29-201ENST00000505659 GOLGA8JA6NMD2 632 aa0.81□□□□□ -2.28
HMGB1P29-201ENST00000505659 A8MWP4 228 aa0.81□□□□□ -2.28
HMGB1P29-201ENST00000505659 CASQ2O14958 399 aaPredicted RBP0.81□□□□□ -2.28
HMGB1P29-201ENST00000505659 ZBTB5O15062 677 aa0.81□□□□□ -2.28
HMGB1P29-201ENST00000505659 XRCC2O43543 280 aa0.81□□□□□ -2.28
HMGB1P29-201ENST00000505659 GOLGA8HP0CJ92 632 aa0.81□□□□□ -2.28
HMGB1P29-201ENST00000505659 GFAPP14136 432 aa0.81□□□□□ -2.28
HMGB1P29-201ENST00000505659 ZNF22P17026 224 aaPredicted RBP0.81□□□□□ -2.28
HMGB1P29-201ENST00000505659 HLA-GP17693 338 aa0.81□□□□□ -2.28
HMGB1P29-201ENST00000505659 BEX3Q00994 111 aa0.81□□□□□ -2.28
HMGB1P29-201ENST00000505659 RAD51Q06609 339 aa0.81□□□□□ -2.28
HMGB1P29-201ENST00000505659 IL18Q14116 193 aa0.81□□□□□ -2.28
HMGB1P29-201ENST00000505659 ITIH4Q14624 930 aa0.81□□□□□ -2.28
HMGB1P29-201ENST00000505659 RPEL1Q2QD12 228 aa0.81□□□□□ -2.28
HMGB1P29-201ENST00000505659 KRTAP5-10Q6L8G5 202 aa0.81□□□□□ -2.28
HMGB1P29-201ENST00000505659 ANGPTL8Q6UXH0 198 aa0.81□□□□□ -2.28
HMGB1P29-201ENST00000505659 CYHR1Q6ZMK1 362 aa0.81□□□□□ -2.28
HMGB1P29-201ENST00000505659 Q6ZQT7 251 aa0.81□□□□□ -2.28
HMGB1P29-201ENST00000505659 FAM43BQ6ZT52 329 aaPredicted RBP0.81□□□□□ -2.28
HMGB1P29-201ENST00000505659 TCF23Q7RTU1 214 aa0.81□□□□□ -2.28
HMGB1P29-201ENST00000505659 AMN1Q8IY45 258 aa0.81□□□□□ -2.28
HMGB1P29-201ENST00000505659 MICU2Q8IYU8 434 aa0.81□□□□□ -2.28
HMGB1P29-201ENST00000505659 RPRMLQ8N4K4 120 aa0.81□□□□□ -2.28
HMGB1P29-201ENST00000505659 CYB561A3Q8NBI2 242 aa0.81□□□□□ -2.28
HMGB1P29-201ENST00000505659 OR2K2Q8NGT1 345 aa0.81□□□□□ -2.28
HMGB1P29-201ENST00000505659 ORAOV1Q8WV07 137 aa0.81□□□□□ -2.28
HMGB1P29-201ENST00000505659 RCN3Q96D15 328 aa0.81□□□□□ -2.28
HMGB1P29-201ENST00000505659 MYCBPQ99417 103 aaPredicted RBP0.81□□□□□ -2.28
HMGB1P29-201ENST00000505659 C11orf70Q9BRQ4 267 aa0.81□□□□□ -2.28
HMGB1P29-201ENST00000505659 ARV1Q9H2C2 271 aa0.81□□□□□ -2.28
HMGB1P29-201ENST00000505659 ELOVL6Q9H5J4 265 aa0.81□□□□□ -2.28
HMGB1P29-201ENST00000505659 EXO5Q9H790 373 aa0.81□□□□□ -2.28
HMGB1P29-201ENST00000505659 AUNIPQ9H7T9 357 aa0.81□□□□□ -2.28
HMGB1P29-201ENST00000505659 MCUBQ9NWR8 336 aa0.81□□□□□ -2.28
HMGB1P29-201ENST00000505659 MYEF2Q9P2K5 600 aaKnown RBP0.81□□□□□ -2.28
HMGB1P29-201ENST00000505659 DDX19BQ9UMR2 479 aa0.81□□□□□ -2.28
HMGB1P29-201ENST00000505659 OR51B2Q9Y5P1 312 aa0.81□□□□□ -2.28
HMGB1P29-201ENST00000505659 YLPM1P49750 1951 aaKnown RBP0.8□□□□□ -2.28
HMGB1P29-201ENST00000505659 TRIM64CA6NLI5 447 aa0.8□□□□□ -2.28
HMGB1P29-201ENST00000505659 WRBO00258 174 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms