RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 ARGLU1Q9NWB6 273 aaPredicted RBP11.78□□□□□ -0.52
SEC61A1-207ENST00000498837 RASL12Q9NYN1 266 aa11.78□□□□□ -0.52
SEC61A1-207ENST00000498837 KLHDC2Q9Y2U9 406 aa11.78□□□□□ -0.52
SEC61A1-207ENST00000498837 MEX3AA1L020 520 aaKnown RBP11.77□□□□□ -0.53
SEC61A1-207ENST00000498837 C17orf98A8MV24 154 aa11.77□□□□□ -0.53
SEC61A1-207ENST00000498837 ODF3BA8MYP8 253 aa11.77□□□□□ -0.53
SEC61A1-207ENST00000498837 SLC1A7O00341 560 aa11.77□□□□□ -0.53
SEC61A1-207ENST00000498837 SYNGR1O43759 233 aa11.77□□□□□ -0.53
SEC61A1-207ENST00000498837 PSMA6P60900 246 aaKnown RBP11.77□□□□□ -0.53
SEC61A1-207ENST00000498837 TCTEX1D4Q5JR98 221 aa11.77□□□□□ -0.53
SEC61A1-207ENST00000498837 BATF2Q8N1L9 274 aa11.77□□□□□ -0.53
SEC61A1-207ENST00000498837 IQCF1Q8N6M8 205 aa11.77□□□□□ -0.53
SEC61A1-207ENST00000498837 POC1AQ8NBT0 407 aa11.77□□□□□ -0.53
SEC61A1-207ENST00000498837 VNN3Q9NY84 501 aa11.77□□□□□ -0.53
SEC61A1-207ENST00000498837 PITPNC1Q9UKF7 332 aa11.77□□□□□ -0.53
SEC61A1-207ENST00000498837 TBL2Q9Y4P3 447 aaKnown RBP11.77□□□□□ -0.53
SEC61A1-207ENST00000498837 TK1P04183 234 aa11.76□□□□□ -0.53
SEC61A1-207ENST00000498837 PF4V1P10720 104 aa11.76□□□□□ -0.53
SEC61A1-207ENST00000498837 SMIM21Q3B7S5 101 aa11.76□□□□□ -0.53
SEC61A1-207ENST00000498837 ZNF626Q68DY1 528 aa11.76□□□□□ -0.53
SEC61A1-207ENST00000498837 CCDC121Q6ZUS5 278 aa11.76□□□□□ -0.53
SEC61A1-207ENST00000498837 CALHM1Q8IU99 346 aa11.76□□□□□ -0.53
SEC61A1-207ENST00000498837 FOXRED1Q96CU9 486 aaPredicted RBP11.76□□□□□ -0.53
SEC61A1-207ENST00000498837 OR8B4Q96RC9 309 aa11.76□□□□□ -0.53
SEC61A1-207ENST00000498837 CDRT15Q96T59 188 aa11.76□□□□□ -0.53
SEC61A1-207ENST00000498837 DGCR6LQ9BY27 220 aa11.76□□□□□ -0.53
SEC61A1-207ENST00000498837 NIPAL2Q9H841 368 aa11.76□□□□□ -0.53
SEC61A1-207ENST00000498837 ZNF446Q9NWS9 450 aa11.76□□□□□ -0.53
SEC61A1-207ENST00000498837 OR14J1Q9UGF5 321 aa11.76□□□□□ -0.53
SEC61A1-207ENST00000498837 U3KQV3 271 aa11.76□□□□□ -0.53
SEC61A1-207ENST00000498837 OR5B21A6NL26 309 aa11.75□□□□□ -0.53
SEC61A1-207ENST00000498837 PF4P02776 101 aa11.75□□□□□ -0.53
SEC61A1-207ENST00000498837 PGA5P0DJD9 388 aa11.75□□□□□ -0.53
SEC61A1-207ENST00000498837 PRDX6P30041 224 aa11.75□□□□□ -0.53
SEC61A1-207ENST00000498837 HCCSP53701 268 aa11.75□□□□□ -0.53
SEC61A1-207ENST00000498837 SLC35A2P78381 396 aa11.75□□□□□ -0.53
SEC61A1-207ENST00000498837 MICAQ29983 383 aa11.75□□□□□ -0.53
SEC61A1-207ENST00000498837 PLCXD3Q63HM9 321 aa11.75□□□□□ -0.53
SEC61A1-207ENST00000498837 CYP2R1Q6VVX0 501 aa11.75□□□□□ -0.53
SEC61A1-207ENST00000498837 TRPM8Q7Z2W7 1104 aa11.75□□□□□ -0.53
SEC61A1-207ENST00000498837 OR11H6Q8NGC7 330 aa11.75□□□□□ -0.53
SEC61A1-207ENST00000498837 OR13D1Q8NGV5 346 aa11.75□□□□□ -0.53
SEC61A1-207ENST00000498837 WWC2-AS2Q96NR7 200 aa11.75□□□□□ -0.53
SEC61A1-207ENST00000498837 NIPSNAP1Q9BPW8 284 aa11.75□□□□□ -0.53
SEC61A1-207ENST00000498837 HILPDAQ9Y5L2 63 aa11.75□□□□□ -0.53
SEC61A1-207ENST00000498837 A0A0U1RQV5 110 aa11.74□□□□□ -0.53
SEC61A1-207ENST00000498837 PSMD9O00233 223 aa11.74□□□□□ -0.53
SEC61A1-207ENST00000498837 F2RL2O00254 374 aa11.74□□□□□ -0.53
SEC61A1-207ENST00000498837 NXPH2O95156 264 aa11.74□□□□□ -0.53
SEC61A1-207ENST00000498837 HOXD3P31249 432 aaPredicted RBP11.74□□□□□ -0.53
SEC61A1-207ENST00000498837 MAGEA2P43356 314 aa11.74□□□□□ -0.53
SEC61A1-207ENST00000498837 HAAOP46952 286 aa11.74□□□□□ -0.53
SEC61A1-207ENST00000498837 DYNLT3P51808 116 aa11.74□□□□□ -0.53
SEC61A1-207ENST00000498837 CD69Q07108 199 aa11.74□□□□□ -0.53
SEC61A1-207ENST00000498837 DYNC1I2Q13409 638 aaKnown RBP11.74□□□□□ -0.53
SEC61A1-207ENST00000498837 LCN8Q6JVE9 175 aa11.74□□□□□ -0.53
SEC61A1-207ENST00000498837 PLBD1Q6P4A8 553 aa11.74□□□□□ -0.53
SEC61A1-207ENST00000498837 KRT77Q7Z794 578 aa11.74□□□□□ -0.53
SEC61A1-207ENST00000498837 CENPVQ7Z7K6 275 aaPredicted RBP11.74□□□□□ -0.53
SEC61A1-207ENST00000498837 ZNF454Q8N9F8 522 aa11.74□□□□□ -0.53
SEC61A1-207ENST00000498837 OR51E1Q8TCB6 317 aa11.74□□□□□ -0.53
SEC61A1-207ENST00000498837 RCC1LQ96I51 464 aaKnown RBP11.74□□□□□ -0.53
SEC61A1-207ENST00000498837 INPP5EQ9NRR6 644 aa11.74□□□□□ -0.53
SEC61A1-207ENST00000498837 FAM206AQ9NX38 181 aa11.74□□□□□ -0.53
SEC61A1-207ENST00000498837 PIGLQ9Y2B2 252 aa11.74□□□□□ -0.53
SEC61A1-207ENST00000498837 TCRBV4S1A1TA0A5B7 111 aa11.73□□□□□ -0.53
SEC61A1-207ENST00000498837 PRR23D1E9PI22 279 aaPredicted RBP11.73□□□□□ -0.53
SEC61A1-207ENST00000498837 J3QT63 122 aa11.73□□□□□ -0.53
SEC61A1-207ENST00000498837 K7N7A8 449 aa11.73□□□□□ -0.53
SEC61A1-207ENST00000498837 GSC2O15499 205 aa11.73□□□□□ -0.53
SEC61A1-207ENST00000498837 NOS1APO75052 506 aaPredicted RBP11.73□□□□□ -0.53
SEC61A1-207ENST00000498837 NRASP01111 189 aa11.73□□□□□ -0.53
SEC61A1-207ENST00000498837 ALDOBP05062 364 aa11.73□□□□□ -0.53
SEC61A1-207ENST00000498837 ZNF728P0DKX0 622 aa11.73□□□□□ -0.53
SEC61A1-207ENST00000498837 PRR23D2P0DMB1 279 aaPredicted RBP11.73□□□□□ -0.53
SEC61A1-207ENST00000498837 IGHV1-8P0DP01 117 aa11.73□□□□□ -0.53
SEC61A1-207ENST00000498837 ALOX5APP20292 161 aa11.73□□□□□ -0.53
SEC61A1-207ENST00000498837 ATP6V1B2P21281 511 aa11.73□□□□□ -0.53
SEC61A1-207ENST00000498837 OR12D2P58182 307 aa11.73□□□□□ -0.53
SEC61A1-207ENST00000498837 SLC34A1Q06495 639 aa11.73□□□□□ -0.53
SEC61A1-207ENST00000498837 RIPPLY1Q0D2K3 151 aa11.73□□□□□ -0.53
SEC61A1-207ENST00000498837 C10orf99Q6UWK7 81 aa11.73□□□□□ -0.53
SEC61A1-207ENST00000498837 COMMD2Q86X83 199 aa11.73□□□□□ -0.53
SEC61A1-207ENST00000498837 PGAM4Q8N0Y7 254 aa11.73□□□□□ -0.53
SEC61A1-207ENST00000498837 TEX47Q8TBZ9 253 aa11.73□□□□□ -0.53
SEC61A1-207ENST00000498837 MYDGFQ969H8 173 aa11.73□□□□□ -0.53
SEC61A1-207ENST00000498837 TEAD3Q99594 435 aa11.73□□□□□ -0.53
SEC61A1-207ENST00000498837 ELAC2Q9BQ52 826 aaKnown RBP11.73□□□□□ -0.53
SEC61A1-207ENST00000498837 GPR84Q9NQS5 396 aa11.73□□□□□ -0.53
SEC61A1-207ENST00000498837 TSSC4Q9Y5U2 329 aaPredicted RBP11.73□□□□□ -0.53
SEC61A1-207ENST00000498837 TMEM269A0A1B0GVZ9 245 aa11.72□□□□□ -0.53
SEC61A1-207ENST00000498837 FAM90A22PA8MWA6 464 aa11.72□□□□□ -0.53
SEC61A1-207ENST00000498837 H3BN98 237 aa11.72□□□□□ -0.53
SEC61A1-207ENST00000498837 IGLV3-1P01715 115 aa11.72□□□□□ -0.53
SEC61A1-207ENST00000498837 ATP6V1B1P15313 513 aa11.72□□□□□ -0.53
SEC61A1-207ENST00000498837 EDDM3BP56851 147 aa11.72□□□□□ -0.53
SEC61A1-207ENST00000498837 COL10A1Q03692 680 aa11.72□□□□□ -0.53
SEC61A1-207ENST00000498837 EGFEM1PQ0D2K5 195 aa11.72□□□□□ -0.53
SEC61A1-207ENST00000498837 ZNF684Q5T5D7 378 aa11.72□□□□□ -0.53
SEC61A1-207ENST00000498837 ASCC1Q8N9N2 400 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms