RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, human

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-217	ENST00000498722	TPD52L2	O43399	206 aa	Known RBP	13.75	□□□□□ -0.21
LMNA-217	ENST00000498722	TPPP	O94811	219 aa		13.75	□□□□□ -0.21
LMNA-217	ENST00000498722	IGHV3-13	P01766	116 aa		13.75	□□□□□ -0.21
LMNA-217	ENST00000498722	CSF3	P09919	207 aa		13.75	□□□□□ -0.21
LMNA-217	ENST00000498722	IL7	P13232	177 aa		13.75	□□□□□ -0.21
LMNA-217	ENST00000498722	MAP2K3	P46734	347 aa		13.75	□□□□□ -0.21
LMNA-217	ENST00000498722	PDLIM4	P50479	330 aa		13.75	□□□□□ -0.21
LMNA-217	ENST00000498722	CLDN12	P56749	244 aa		13.75	□□□□□ -0.21
LMNA-217	ENST00000498722	DSCR9	P59020	149 aa		13.75	□□□□□ -0.21
LMNA-217	ENST00000498722	HLX	Q14774	488 aa	Predicted RBP	13.75	□□□□□ -0.21
LMNA-217	ENST00000498722	TRIQK	Q629K1	86 aa		13.75	□□□□□ -0.21
LMNA-217	ENST00000498722	UTS2B	Q765I0	119 aa		13.75	□□□□□ -0.21
LMNA-217	ENST00000498722	CENPS	Q8N2Z9	138 aa		13.75	□□□□□ -0.21
LMNA-217	ENST00000498722		Q8N402	240 aa		13.75	□□□□□ -0.21
LMNA-217	ENST00000498722	JAGN1	Q8N5M9	183 aa		13.75	□□□□□ -0.21
LMNA-217	ENST00000498722	POC5	Q8NA72	575 aa		13.75	□□□□□ -0.21
LMNA-217	ENST00000498722	SEMA6D	Q8NFY4	1073 aa		13.75	□□□□□ -0.21
LMNA-217	ENST00000498722	OR51A2	Q8NGJ7	313 aa		13.75	□□□□□ -0.21
LMNA-217	ENST00000498722	OR13C9	Q8NGT0	318 aa		13.75	□□□□□ -0.21
LMNA-217	ENST00000498722	GTF3A	Q92664	365 aa	Known RBP	13.75	□□□□□ -0.21
LMNA-217	ENST00000498722	FAM3D	Q96BQ1	224 aa		13.75	□□□□□ -0.21
LMNA-217	ENST00000498722	C18orf12	Q96KH6	178 aa		13.75	□□□□□ -0.21
LMNA-217	ENST00000498722	METTL17	Q9H7H0	456 aa	Predicted RBP	13.75	□□□□□ -0.21
LMNA-217	ENST00000498722	TANC2	Q9HCD6	1990 aa		13.75	□□□□□ -0.21
LMNA-217	ENST00000498722	DYSF	O75923	2080 aa		13.75	□□□□□ -0.21
LMNA-217	ENST00000498722	PTTG1	O95997	202 aa		13.74	□□□□□ -0.21
LMNA-217	ENST00000498722	OCM	P0CE72	109 aa	Predicted RBP	13.74	□□□□□ -0.21
LMNA-217	ENST00000498722	DAO	P14920	347 aa		13.74	□□□□□ -0.21
LMNA-217	ENST00000498722	TUBG1	P23258	451 aa		13.74	□□□□□ -0.21
LMNA-217	ENST00000498722	ZNF81	P51508	661 aa		13.74	□□□□□ -0.21
LMNA-217	ENST00000498722	RIPPLY1	Q0D2K3	151 aa		13.74	□□□□□ -0.21
LMNA-217	ENST00000498722	P2RY14	Q15391	338 aa		13.74	□□□□□ -0.21
LMNA-217	ENST00000498722	BAK1	Q16611	211 aa		13.74	□□□□□ -0.21
LMNA-217	ENST00000498722	GLYATL3	Q5SZD4	288 aa		13.74	□□□□□ -0.21
LMNA-217	ENST00000498722	HACD4	Q5VWC8	232 aa		13.74	□□□□□ -0.21
LMNA-217	ENST00000498722		Q6ZNX1	250 aa		13.74	□□□□□ -0.21
LMNA-217	ENST00000498722	COLCA1	Q6ZS62	124 aa		13.74	□□□□□ -0.21
LMNA-217	ENST00000498722	CMTM4	Q8IZR5	234 aa		13.74	□□□□□ -0.21
LMNA-217	ENST00000498722	CIART	Q8N365	385 aa	Predicted RBP	13.74	□□□□□ -0.21
LMNA-217	ENST00000498722	C19orf18	Q8NEA5	215 aa		13.74	□□□□□ -0.21
LMNA-217	ENST00000498722	OR51D1	Q8NGF3	324 aa		13.74	□□□□□ -0.21
LMNA-217	ENST00000498722	HAVCR1	Q96D42	359 aa		13.74	□□□□□ -0.21
LMNA-217	ENST00000498722	CMBL	Q96DG6	245 aa		13.74	□□□□□ -0.21
LMNA-217	ENST00000498722	SOX7	Q9BT81	388 aa		13.74	□□□□□ -0.21
LMNA-217	ENST00000498722	OPA3	Q9H6K4	179 aa		13.74	□□□□□ -0.21
LMNA-217	ENST00000498722	MYOZ1	Q9NP98	299 aa	Predicted RBP	13.74	□□□□□ -0.21
LMNA-217	ENST00000498722	TUBG2	Q9NRH3	451 aa		13.74	□□□□□ -0.21
LMNA-217	ENST00000498722	C14orf119	Q9NWQ9	140 aa		13.74	□□□□□ -0.21
LMNA-217	ENST00000498722	PIGL	Q9Y2B2	252 aa		13.74	□□□□□ -0.21
LMNA-217	ENST00000498722	IGHV4-30-2	A0A087WSY4	118 aa		13.73	□□□□□ -0.21
LMNA-217	ENST00000498722		A0A0G2JMP0	313 aa		13.73	□□□□□ -0.21
LMNA-217	ENST00000498722		A0A0X1KG70	313 aa		13.73	□□□□□ -0.21
LMNA-217	ENST00000498722	C17orf100	A8MU93	164 aa		13.73	□□□□□ -0.21
LMNA-217	ENST00000498722		J3QW42	95 aa		13.73	□□□□□ -0.21
LMNA-217	ENST00000498722	CTDSPL	O15194	276 aa		13.73	□□□□□ -0.21
LMNA-217	ENST00000498722	SPRY3	O43610	288 aa		13.73	□□□□□ -0.21
LMNA-217	ENST00000498722	HLA-DQB1	P01920	261 aa		13.73	□□□□□ -0.21
LMNA-217	ENST00000498722	HCK	P08631	526 aa		13.73	□□□□□ -0.21
LMNA-217	ENST00000498722	ARSB	P15848	533 aa		13.73	□□□□□ -0.21
LMNA-217	ENST00000498722	POU3F4	P49335	361 aa		13.73	□□□□□ -0.21
LMNA-217	ENST00000498722	INPP1	P49441	399 aa		13.73	□□□□□ -0.21
LMNA-217	ENST00000498722	CCL8	P80075	99 aa		13.73	□□□□□ -0.21
LMNA-217	ENST00000498722	MALL	Q13021	153 aa		13.73	□□□□□ -0.21
LMNA-217	ENST00000498722	PSG7	Q13046	419 aa		13.73	□□□□□ -0.21
LMNA-217	ENST00000498722	OXA1L	Q15070	435 aa		13.73	□□□□□ -0.21
LMNA-217	ENST00000498722	C2orf76	Q3KRA6	126 aa		13.73	□□□□□ -0.21
LMNA-217	ENST00000498722	ZBTB37	Q5TC79	503 aa		13.73	□□□□□ -0.21
LMNA-217	ENST00000498722	DCDC5	Q6ZRR9	648 aa		13.73	□□□□□ -0.21
LMNA-217	ENST00000498722	LYPD6	Q86Y78	171 aa		13.73	□□□□□ -0.21
LMNA-217	ENST00000498722	OR5AS1	Q8N127	324 aa		13.73	□□□□□ -0.21
LMNA-217	ENST00000498722	MAPK1IP1L	Q8NDC0	245 aa		13.73	□□□□□ -0.21
LMNA-217	ENST00000498722	OR4M2	Q8NGB6	313 aa		13.73	□□□□□ -0.21
LMNA-217	ENST00000498722	UBASH3B	Q8TF42	649 aa		13.73	□□□□□ -0.21
LMNA-217	ENST00000498722	SPSB4	Q96A44	273 aa		13.73	□□□□□ -0.21
LMNA-217	ENST00000498722	SLC25A28	Q96A46	364 aa		13.73	□□□□□ -0.21
LMNA-217	ENST00000498722	PTX4	Q96A99	478 aa		13.73	□□□□□ -0.21
LMNA-217	ENST00000498722	SLC25A38	Q96DW6	304 aa		13.73	□□□□□ -0.21
LMNA-217	ENST00000498722	COX4I2	Q96KJ9	171 aa		13.73	□□□□□ -0.21
LMNA-217	ENST00000498722	PIMREG	Q9BSJ6	248 aa		13.73	□□□□□ -0.21
LMNA-217	ENST00000498722	CHST5	Q9GZS9	411 aa		13.73	□□□□□ -0.21
LMNA-217	ENST00000498722	OCEL1	Q9H607	264 aa		13.73	□□□□□ -0.21
LMNA-217	ENST00000498722	MSL2	Q9HCI7	577 aa		13.73	□□□□□ -0.21
LMNA-217	ENST00000498722	DECR2	Q9NUI1	292 aa		13.73	□□□□□ -0.21
LMNA-217	ENST00000498722	RHBDL2	Q9NX52	303 aa		13.73	□□□□□ -0.21
LMNA-217	ENST00000498722	CGGBP1	Q9UFW8	167 aa	Predicted RBP	13.73	□□□□□ -0.21
LMNA-217	ENST00000498722	C5orf63	A6NC05	138 aa		13.72	□□□□□ -0.21
LMNA-217	ENST00000498722		A6NIN4	97 aa		13.72	□□□□□ -0.21
LMNA-217	ENST00000498722	ANOS1	P23352	680 aa		13.72	□□□□□ -0.21
LMNA-217	ENST00000498722	ZNF93	P35789	620 aa	Predicted RBP	13.72	□□□□□ -0.21
LMNA-217	ENST00000498722	MNDA	P41218	407 aa		13.72	□□□□□ -0.21
LMNA-217	ENST00000498722	CNN3	Q15417	329 aa	Known RBP	13.72	□□□□□ -0.21
LMNA-217	ENST00000498722	PCGF3	Q3KNV8	242 aa		13.72	□□□□□ -0.21
LMNA-217	ENST00000498722	TMEM255A	Q5JRV8	349 aa		13.72	□□□□□ -0.21
LMNA-217	ENST00000498722	PNLDC1	Q8NA58	520 aa	Known RBP	13.72	□□□□□ -0.21
LMNA-217	ENST00000498722	OR52N4	Q8NGI2	321 aa		13.72	□□□□□ -0.21
LMNA-217	ENST00000498722	PHF21A	Q96BD5	680 aa		13.72	□□□□□ -0.21
LMNA-217	ENST00000498722	CPNE2	Q96FN4	548 aa	Predicted RBP	13.72	□□□□□ -0.21
LMNA-217	ENST00000498722	TECTB	Q96PL2	329 aa		13.72	□□□□□ -0.21
LMNA-217	ENST00000498722	REG4	Q9BYZ8	158 aa		13.72	□□□□□ -0.21
LMNA-217	ENST00000498722	DIABLO	Q9NR28	239 aa		13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms