RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 RASL12Q9NYN1 266 aa11.81□□□□□ -0.52
TRAF4-212ENST00000498540 PITPNC1Q9UKF7 332 aa11.81□□□□□ -0.52
TRAF4-212ENST00000498540 TBL2Q9Y4P3 447 aaKnown RBP11.81□□□□□ -0.52
TRAF4-212ENST00000498540 DNAH9Q9NYC9 4486 aa11.8□□□□□ -0.52
TRAF4-212ENST00000498540 MEX3AA1L020 520 aaKnown RBP11.8□□□□□ -0.52
TRAF4-212ENST00000498540 OR5B21A6NL26 309 aa11.8□□□□□ -0.52
TRAF4-212ENST00000498540 C17orf98A8MV24 154 aa11.8□□□□□ -0.52
TRAF4-212ENST00000498540 SYNGR1O43759 233 aa11.8□□□□□ -0.52
TRAF4-212ENST00000498540 PRDX2P32119 198 aa11.8□□□□□ -0.52
TRAF4-212ENST00000498540 MAP2K3P46734 347 aa11.8□□□□□ -0.52
TRAF4-212ENST00000498540 SLC35A2P78381 396 aa11.8□□□□□ -0.52
TRAF4-212ENST00000498540 ZNF626Q68DY1 528 aa11.8□□□□□ -0.52
TRAF4-212ENST00000498540 BATF2Q8N1L9 274 aa11.8□□□□□ -0.52
TRAF4-212ENST00000498540 MALSU1Q96EH3 234 aa11.8□□□□□ -0.52
TRAF4-212ENST00000498540 WWC2-AS2Q96NR7 200 aa11.8□□□□□ -0.52
TRAF4-212ENST00000498540 MYLK2Q9H1R3 596 aa11.8□□□□□ -0.52
TRAF4-212ENST00000498540 OR51V1Q9H2C8 321 aa11.8□□□□□ -0.52
TRAF4-212ENST00000498540 VNN3Q9NY84 501 aa11.8□□□□□ -0.52
TRAF4-212ENST00000498540 F2RL2O00254 374 aa11.79□□□□□ -0.52
TRAF4-212ENST00000498540 PF4P02776 101 aa11.79□□□□□ -0.52
TRAF4-212ENST00000498540 TK1P04183 234 aa11.79□□□□□ -0.52
TRAF4-212ENST00000498540 PGA5P0DJD9 388 aa11.79□□□□□ -0.52
TRAF4-212ENST00000498540 H2AFXP16104 143 aaPredicted RBP11.79□□□□□ -0.52
TRAF4-212ENST00000498540 CD69Q07108 199 aa11.79□□□□□ -0.52
TRAF4-212ENST00000498540 PLCXD3Q63HM9 321 aa11.79□□□□□ -0.52
TRAF4-212ENST00000498540 CCDC121Q6ZUS5 278 aa11.79□□□□□ -0.52
TRAF4-212ENST00000498540 MOB3CQ70IA8 216 aa11.79□□□□□ -0.52
TRAF4-212ENST00000498540 TRPM8Q7Z2W7 1104 aa11.79□□□□□ -0.52
TRAF4-212ENST00000498540 OR5A2Q8NGI9 324 aa11.79□□□□□ -0.52
TRAF4-212ENST00000498540 RCC1LQ96I51 464 aaKnown RBP11.79□□□□□ -0.52
TRAF4-212ENST00000498540 OR8B4Q96RC9 309 aa11.79□□□□□ -0.52
TRAF4-212ENST00000498540 DGCR6LQ9BY27 220 aa11.79□□□□□ -0.52
TRAF4-212ENST00000498540 NIPAL2Q9H841 368 aa11.79□□□□□ -0.52
TRAF4-212ENST00000498540 ALDOBP05062 364 aa11.78□□□□□ -0.52
TRAF4-212ENST00000498540 PRDX6P30041 224 aa11.78□□□□□ -0.52
TRAF4-212ENST00000498540 HOXD3P31249 432 aaPredicted RBP11.78□□□□□ -0.52
TRAF4-212ENST00000498540 MAGEA2P43356 314 aa11.78□□□□□ -0.52
TRAF4-212ENST00000498540 DYNLT3P51808 116 aa11.78□□□□□ -0.52
TRAF4-212ENST00000498540 LCN8Q6JVE9 175 aa11.78□□□□□ -0.52
TRAF4-212ENST00000498540 CALHM1Q8IU99 346 aa11.78□□□□□ -0.52
TRAF4-212ENST00000498540 ZNF454Q8N9F8 522 aa11.78□□□□□ -0.52
TRAF4-212ENST00000498540 OR11H6Q8NGC7 330 aa11.78□□□□□ -0.52
TRAF4-212ENST00000498540 OR13D1Q8NGV5 346 aa11.78□□□□□ -0.52
TRAF4-212ENST00000498540 NIPSNAP1Q9BPW8 284 aa11.78□□□□□ -0.52
TRAF4-212ENST00000498540 INPP5EQ9NRR6 644 aa11.78□□□□□ -0.52
TRAF4-212ENST00000498540 OR14J1Q9UGF5 321 aa11.78□□□□□ -0.52
TRAF4-212ENST00000498540 HILPDAQ9Y5L2 63 aa11.78□□□□□ -0.52
TRAF4-212ENST00000498540 U3KQV3 271 aa11.78□□□□□ -0.52
TRAF4-212ENST00000498540 A0A0U1RQV5 110 aa11.77□□□□□ -0.53
TRAF4-212ENST00000498540 TCRBV4S1A1TA0A5B7 111 aa11.77□□□□□ -0.53
TRAF4-212ENST00000498540 J3QT63 122 aa11.77□□□□□ -0.53
TRAF4-212ENST00000498540 NXPH2O95156 264 aa11.77□□□□□ -0.53
TRAF4-212ENST00000498540 ZNF728P0DKX0 622 aa11.77□□□□□ -0.53
TRAF4-212ENST00000498540 IGHV1-8P0DP01 117 aa11.77□□□□□ -0.53
TRAF4-212ENST00000498540 HAAOP46952 286 aa11.77□□□□□ -0.53
TRAF4-212ENST00000498540 EGFEM1PQ0D2K5 195 aa11.77□□□□□ -0.53
TRAF4-212ENST00000498540 DYNC1I2Q13409 638 aaKnown RBP11.77□□□□□ -0.53
TRAF4-212ENST00000498540 MICAQ29983 383 aa11.77□□□□□ -0.53
TRAF4-212ENST00000498540 PLBD1Q6P4A8 553 aa11.77□□□□□ -0.53
TRAF4-212ENST00000498540 CYP2R1Q6VVX0 501 aa11.77□□□□□ -0.53
TRAF4-212ENST00000498540 TCF23Q7RTU1 214 aa11.77□□□□□ -0.53
TRAF4-212ENST00000498540 COMMD2Q86X83 199 aa11.77□□□□□ -0.53
TRAF4-212ENST00000498540 TEX47Q8TBZ9 253 aa11.77□□□□□ -0.53
TRAF4-212ENST00000498540 MYDGFQ969H8 173 aa11.77□□□□□ -0.53
TRAF4-212ENST00000498540 CDRT15Q96T59 188 aa11.77□□□□□ -0.53
TRAF4-212ENST00000498540 B9D2Q9BPU9 175 aa11.77□□□□□ -0.53
TRAF4-212ENST00000498540 NRIP2Q9BQI9 281 aa11.77□□□□□ -0.53
TRAF4-212ENST00000498540 HES4Q9HCC6 221 aa11.77□□□□□ -0.53
TRAF4-212ENST00000498540 GPR84Q9NQS5 396 aa11.77□□□□□ -0.53
TRAF4-212ENST00000498540 FAM206AQ9NX38 181 aa11.77□□□□□ -0.53
TRAF4-212ENST00000498540 PIGLQ9Y2B2 252 aa11.77□□□□□ -0.53
TRAF4-212ENST00000498540 TSSC4Q9Y5U2 329 aaPredicted RBP11.77□□□□□ -0.53
TRAF4-212ENST00000498540 K7N7A8 449 aa11.76□□□□□ -0.53
TRAF4-212ENST00000498540 PSMD9O00233 223 aa11.76□□□□□ -0.53
TRAF4-212ENST00000498540 NOS1APO75052 506 aaPredicted RBP11.76□□□□□ -0.53
TRAF4-212ENST00000498540 IGLV3-1P01715 115 aa11.76□□□□□ -0.53
TRAF4-212ENST00000498540 RBP4P02753 201 aa11.76□□□□□ -0.53
TRAF4-212ENST00000498540 ATP6V1B2P21281 511 aa11.76□□□□□ -0.53
TRAF4-212ENST00000498540 HCCSP53701 268 aa11.76□□□□□ -0.53
TRAF4-212ENST00000498540 OR12D2P58182 307 aa11.76□□□□□ -0.53
TRAF4-212ENST00000498540 SLC34A1Q06495 639 aa11.76□□□□□ -0.53
TRAF4-212ENST00000498540 RIPPLY1Q0D2K3 151 aa11.76□□□□□ -0.53
TRAF4-212ENST00000498540 C10orf99Q6UWK7 81 aa11.76□□□□□ -0.53
TRAF4-212ENST00000498540 KRT77Q7Z794 578 aa11.76□□□□□ -0.53
TRAF4-212ENST00000498540 PGAM4Q8N0Y7 254 aa11.76□□□□□ -0.53
TRAF4-212ENST00000498540 ASCC1Q8N9N2 400 aaKnown RBP11.76□□□□□ -0.53
TRAF4-212ENST00000498540 OR51E1Q8TCB6 317 aa11.76□□□□□ -0.53
TRAF4-212ENST00000498540 ARGLU1Q9NWB6 273 aaPredicted RBP11.76□□□□□ -0.53
TRAF4-212ENST00000498540 SAMHD1Q9Y3Z3 626 aaKnown RBP11.76□□□□□ -0.53
TRAF4-212ENST00000498540 TMEM269A0A1B0GVZ9 245 aa11.75□□□□□ -0.53
TRAF4-212ENST00000498540 FAM90A22PA8MWA6 464 aa11.75□□□□□ -0.53
TRAF4-212ENST00000498540 PRR23D1E9PI22 279 aaPredicted RBP11.75□□□□□ -0.53
TRAF4-212ENST00000498540 H3BN98 237 aa11.75□□□□□ -0.53
TRAF4-212ENST00000498540 DUS4LO95620 317 aaKnown RBP11.75□□□□□ -0.53
TRAF4-212ENST00000498540 NRASP01111 189 aa11.75□□□□□ -0.53
TRAF4-212ENST00000498540 PRR23D2P0DMB1 279 aaPredicted RBP11.75□□□□□ -0.53
TRAF4-212ENST00000498540 ATP6V1B1P15313 513 aa11.75□□□□□ -0.53
TRAF4-212ENST00000498540 ALOX5APP20292 161 aa11.75□□□□□ -0.53
TRAF4-212ENST00000498540 AZGP1P25311 298 aaKnown RBP11.75□□□□□ -0.53
TRAF4-212ENST00000498540 EDDM3BP56851 147 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 504.3 ms